RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 TICAM2Q86XR7 235 aa17.89■□□□□ 0.45
CPNE1-215ENST00000437100 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.89■□□□□ 0.455e-7■■■■■ 36.7
CPNE1-215ENST00000437100 TDRD3Q9H7E2 651 aaKnown RBP17.89■□□□□ 0.45
CPNE1-215ENST00000437100 ZNF532Q9HCE3 1301 aa17.89■□□□□ 0.45
CPNE1-215ENST00000437100 MYH2Q9UKX2 1941 aa17.88■□□□□ 0.45
CPNE1-215ENST00000437100 CLRN2A0PK11 232 aa17.88■□□□□ 0.45
CPNE1-215ENST00000437100 MYO1BO43795 1136 aa17.88■□□□□ 0.45
CPNE1-215ENST00000437100 SLFNL1Q499Z3 407 aa17.88■□□□□ 0.45
CPNE1-215ENST00000437100 FKBP1CQ5VVH2 108 aa17.88■□□□□ 0.45
CPNE1-215ENST00000437100 MAP1SQ66K74 1059 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-215ENST00000437100 APOBEC3FQ8IUX4 373 aaKnown RBP17.88■□□□□ 0.45
CPNE1-215ENST00000437100 SMC1BQ8NDV3 1235 aa17.88■□□□□ 0.45
CPNE1-215ENST00000437100 ECM29Q5VYK3 1845 aa17.87■□□□□ 0.45
CPNE1-215ENST00000437100 ITGBL1O95965 494 aaPredicted RBP17.87■□□□□ 0.45
CPNE1-215ENST00000437100 ZFYP08048 801 aaPredicted RBP17.87■□□□□ 0.45
CPNE1-215ENST00000437100 FSTL1Q12841 308 aa17.87■□□□□ 0.45
CPNE1-215ENST00000437100 ZSCAN25Q6NSZ9 544 aa17.87■□□□□ 0.45
CPNE1-215ENST00000437100 CNTROBQ8N137 903 aa17.87■□□□□ 0.45
CPNE1-215ENST00000437100 RIOK1Q9BRS2 568 aaKnown RBP17.87■□□□□ 0.45
CPNE1-215ENST00000437100 FSD1Q9BTV5 496 aa17.87■□□□□ 0.45
CPNE1-215ENST00000437100 CLEC11AQ9Y240 323 aa17.87■□□□□ 0.45
CPNE1-215ENST00000437100 RNF113AO15541 343 aaKnown RBP17.86■□□□□ 0.45
CPNE1-215ENST00000437100 WDHD1O75717 1129 aaPredicted RBP17.86■□□□□ 0.45
CPNE1-215ENST00000437100 CDC37L1Q7L3B6 337 aa17.86■□□□□ 0.45
CPNE1-215ENST00000437100 KRT26Q7Z3Y9 468 aa17.86■□□□□ 0.45
CPNE1-215ENST00000437100 DCPSQ96C86 337 aaKnown RBP17.86■□□□□ 0.45
CPNE1-215ENST00000437100 IDI2Q9BXS1 227 aa17.86■□□□□ 0.45
CPNE1-215ENST00000437100 USP40Q9NVE5 1235 aa17.86■□□□□ 0.45
CPNE1-215ENST00000437100 PASKQ96RG2 1323 aa17.86■□□□□ 0.45
CPNE1-215ENST00000437100 CNTNAP1P78357 1384 aa17.86■□□□□ 0.45
CPNE1-215ENST00000437100 ADM5C9JUS6 153 aa17.85■□□□□ 0.45
CPNE1-215ENST00000437100 NPM3O75607 178 aaKnown RBP17.85■□□□□ 0.45
CPNE1-215ENST00000437100 NFIAQ12857 509 aa17.85■□□□□ 0.45
CPNE1-215ENST00000437100 CERS3Q8IU89 383 aa17.85■□□□□ 0.45
CPNE1-215ENST00000437100 APPBP2Q92624 585 aa17.85■□□□□ 0.45
CPNE1-215ENST00000437100 GLIS2Q9BZE0 524 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-215ENST00000437100 AATFQ9NY61 560 aaKnown RBP eCLIP17.85■□□□□ 0.45
CPNE1-215ENST00000437100 RPAP1Q9BWH6 1393 aaPredicted RBP17.84■□□□□ 0.45
CPNE1-215ENST00000437100 BAG3O95817 575 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 PLCG2P16885 1265 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 SDSP20132 328 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 CACNB3P54284 484 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 DYNLL1P63167 89 aaKnown RBP17.84■□□□□ 0.45
CPNE1-215ENST00000437100 LRRFIP1Q32MZ4 808 aaKnown RBP17.84■□□□□ 0.45
CPNE1-215ENST00000437100 ZMYM1Q5SVZ6 1142 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 USP48Q86UV5 1035 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 FAM83AQ86UY5 434 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 SULF1Q8IWU6 871 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 MIGA1Q8NAN2 632 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 SH3RF3Q8TEJ3 882 aaPredicted RBP17.84■□□□□ 0.45
CPNE1-215ENST00000437100 OSBP2Q969R2 916 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 PUS7LQ9H0K6 701 aaKnown RBP17.84■□□□□ 0.45
CPNE1-215ENST00000437100 DEFB129Q9H1M3 183 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 VEZTQ9HBM0 779 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 FAM198AQ9UFP1 575 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 PPP2R3BQ9Y5P8 575 aa17.84■□□□□ 0.45
CPNE1-215ENST00000437100 MYH7P12883 1935 aa17.83■□□□□ 0.44
CPNE1-215ENST00000437100 TRIM6-TRIM34B2RNG4 842 aa17.83■□□□□ 0.44
CPNE1-215ENST00000437100 TNFAIP1Q13829 316 aa17.83■□□□□ 0.44
CPNE1-215ENST00000437100 TEPSINQ96N21 525 aa17.83■□□□□ 0.44
CPNE1-215ENST00000437100 DDX4Q9NQI0 724 aaKnown RBP17.83■□□□□ 0.44
CPNE1-215ENST00000437100 TMOD2Q9NZR1 351 aa17.83■□□□□ 0.44
CPNE1-215ENST00000437100 SCAF8Q9UPN6 1271 aaKnown RBP17.83■□□□□ 0.44
CPNE1-215ENST00000437100 MAGEB6P1A0A0J9YX57 407 aa17.82■□□□□ 0.44
CPNE1-215ENST00000437100 TCP10L2B9ZVM9 353 aa17.82■□□□□ 0.44
CPNE1-215ENST00000437100 TRAF5O00463 557 aa17.82■□□□□ 0.44
CPNE1-215ENST00000437100 RGS3P49796 1198 aa17.82■□□□□ 0.44
CPNE1-215ENST00000437100 RASA3Q14644 834 aa17.82■□□□□ 0.44
CPNE1-215ENST00000437100 BMP2KLQ5H9B9 411 aa17.82■□□□□ 0.44
CPNE1-215ENST00000437100 DLK2Q6UY11 383 aa17.82■□□□□ 0.44
CPNE1-215ENST00000437100 TEX11Q8IYF3 940 aa17.82■□□□□ 0.44
CPNE1-215ENST00000437100 LCORLQ8N3X6 602 aa17.82■□□□□ 0.44
CPNE1-215ENST00000437100 RILPL2Q969X0 211 aa17.82■□□□□ 0.44
CPNE1-215ENST00000437100 NOL10Q9BSC4 688 aaKnown RBP17.82■□□□□ 0.44
CPNE1-215ENST00000437100 COL2A1P02458 1487 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-215ENST00000437100 ENTPD3O75355 529 aa17.81■□□□□ 0.44
CPNE1-215ENST00000437100 MBD4O95243 580 aa17.81■□□□□ 0.44
CPNE1-215ENST00000437100 FAM151AQ8WW52 585 aa17.81■□□□□ 0.44
CPNE1-215ENST00000437100 CDCA5Q96FF9 252 aa17.81■□□□□ 0.44
CPNE1-215ENST00000437100 SSC5DA1L4H1 1573 aa17.8■□□□□ 0.44
CPNE1-215ENST00000437100 M0R2C6 588 aa17.8■□□□□ 0.44
CPNE1-215ENST00000437100 TNNI2P48788 182 aa17.8■□□□□ 0.44
CPNE1-215ENST00000437100 FMR1Q06787 632 aaKnown RBP eCLIP17.8■□□□□ 0.447e-7■■■□□ 18.6
CPNE1-215ENST00000437100 CDAN1Q8IWY9 1227 aa17.8■□□□□ 0.44
CPNE1-215ENST00000437100 ZFPM1Q8IX07 1006 aa17.8■□□□□ 0.44
CPNE1-215ENST00000437100 STRBPQ96SI9 672 aaKnown RBP17.8■□□□□ 0.44
CPNE1-215ENST00000437100 TMEM39BQ9GZU3 492 aa17.8■□□□□ 0.44
CPNE1-215ENST00000437100 MKRN1Q9UHC7 482 aaKnown RBP17.8■□□□□ 0.44
CPNE1-215ENST00000437100 ATRNL1Q5VV63 1379 aa17.79■□□□□ 0.44
CPNE1-215ENST00000437100 FLT1P17948 1338 aa17.79■□□□□ 0.44
CPNE1-215ENST00000437100 A0A0D9SFI3 127 aa17.79■□□□□ 0.44
CPNE1-215ENST00000437100 SH3BP5LQ7L8J4 393 aa17.79■□□□□ 0.44
CPNE1-215ENST00000437100 FAM227BQ96M60 508 aa17.79■□□□□ 0.44
CPNE1-215ENST00000437100 SEC62Q99442 399 aaKnown RBP17.79■□□□□ 0.44
CPNE1-215ENST00000437100 OSBPL5Q9H0X9 879 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-215ENST00000437100 ARMT1Q9H993 441 aa17.79■□□□□ 0.44
CPNE1-215ENST00000437100 HELLSQ9NRZ9 838 aa17.79■□□□□ 0.44
CPNE1-215ENST00000437100 GTF3C3Q9Y5Q9 886 aa17.79■□□□□ 0.44
CPNE1-215ENST00000437100 POLR2AP24928 1970 aaKnown RBP17.79■□□□□ 0.44
CPNE1-215ENST00000437100 GPAA1O43292 621 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms