RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 A0A1W2PQ64 194 aa12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 A0A1W2PQD8 194 aa12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 DHX16O60231 1041 aaKnown RBP12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 ISM2Q6H9L7 571 aa12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 LRRC8AQ8IWT6 810 aa12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 EPB41L4AQ9HCS5 686 aaPredicted RBP12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 BCL9O00512 1426 aa12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 SH2B2O14492 632 aaPredicted RBP12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 APOA5Q6Q788 366 aa12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 MRFAP1L1Q96HT8 127 aa12.09□□□□□ -0.47
CLSTN1-203ENST00000435891 C4AP0C0L4 1744 aa12.08□□□□□ -0.47
CLSTN1-203ENST00000435891 C4BP0C0L5 1744 aa12.08□□□□□ -0.47
CLSTN1-203ENST00000435891 CDC25BP30305 580 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 METAP2P50579 478 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 ANO1Q5XXA6 986 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 DZIP3Q86Y13 1208 aaKnown RBP12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 STRBPQ96SI9 672 aaKnown RBP12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 SEC31BQ9NQW1 1179 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 KIAA1468Q9P260 1216 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 RANBP6O60518 1105 aaKnown RBP12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 PDE8AO60658 829 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 YEATS4O95619 227 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 CTDSPL2Q05D32 466 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 TRDNQ13061 729 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 UBE3CQ15386 1083 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 STK11IPQ8N1F8 1099 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 KCNG4Q8TDN1 519 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 ALG1Q9BT22 464 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 FAM217BQ9NTX9 383 aaPredicted RBP12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 LRP6O75581 1613 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 ZNF202O95125 648 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 ARID4AP29374 1257 aaPredicted RBP12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 NBPF11Q86T75 865 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 VPS37DQ86XT2 251 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 CEP57L1Q8IYX8 460 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 IGDCC4Q8TDY8 1250 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 ZNF512BQ96KM6 892 aaPredicted RBP12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 ZMYM6O95789 1325 aa12.08□□□□□ -0.48
CLSTN1-203ENST00000435891 PFKFB1P16118 471 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 FGFR2P21802 821 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 IRX3P78415 501 aaPredicted RBP12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 RASGRF1Q13972 1273 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 SYNE3Q6ZMZ3 975 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 BRAPQ7Z569 592 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 ZBTB9Q96C00 473 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 ZFP91Q96JP5 570 aaPredicted RBP12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 PRKAB2O43741 272 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 ATRNO75882 1429 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 MYH3P11055 1940 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 TNNT1P13805 278 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 NUP98P52948 1817 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 NTRK3Q16288 839 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 KRT40Q6A162 431 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 MAGEB6Q8N7X4 407 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 NAA30Q147X3 362 aaPredicted RBP12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 AIDAQ96BJ3 306 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 ARMT1Q9H993 441 aa12.07□□□□□ -0.48
CLSTN1-203ENST00000435891 MBD4O95243 580 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 TTF1Q15361 905 aaPredicted RBP12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 SUSD4Q5VX71 490 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 ZNF34Q8IZ26 560 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 LY9Q9HBG7 655 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 ZSWIM5Q9P217 1185 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 WDR19Q8NEZ3 1342 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 A0A0G2JS52 829 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 CCDC69A6NI79 296 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 CCZ1BP86790 482 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 CCZ1P86791 482 aaPredicted RBP12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 PUM3Q15397 648 aaKnown RBP12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 SPATA5Q8NB90 893 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 CHMP4CQ96CF2 233 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 CLIC6Q96NY7 704 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 SMIM22K7EJ46 135 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 SKILP12757 684 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 LPIN2Q92539 896 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 ZKSCAN3Q9BRR0 538 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 STRCQ7RTU9 1775 aa12.06□□□□□ -0.48
CLSTN1-203ENST00000435891 SLC3A2P08195 630 aaKnown RBP12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 GUCY1A2P33402 732 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 SLC39A14Q15043 492 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 TPD52L1Q16890 204 aaPredicted RBP12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 SHC4Q6S5L8 630 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 IFNL3Q8IZI9 196 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 DISP2A7MBM2 1401 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 WTIPA6NIX2 430 aaPredicted RBP12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 NFXL1Q6ZNB6 911 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 TRMT1Q9NXH9 659 aaKnown RBP12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 CCDC66A2RUB6 948 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 ZBTB43O43298 467 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 CMA1P23946 247 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 BCAMP50895 628 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 NCAPHQ15003 741 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 PTPAQ15257 358 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 TMEM67Q5HYA8 995 aa12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 CMTR1Q8N1G2 835 aaKnown RBP12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 XPO4Q9C0E2 1151 aaKnown RBP12.05□□□□□ -0.48
CLSTN1-203ENST00000435891 ANKRD36CQ5JPF3 1778 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 CTIFO43310 598 aaKnown RBP12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 CCDC82Q8N4S0 544 aa12.04□□□□□ -0.48
CLSTN1-203ENST00000435891 IQSEC3Q9UPP2 1182 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms