RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 WNK4Q96J92 1243 aa21.65■■□□□ 1.06
NUP50-208ENST00000430547 RPAP1Q9BWH6 1393 aaPredicted RBP21.64■■□□□ 1.06
NUP50-208ENST00000430547 MANSC4A6NHS7 340 aaPredicted RBP21.64■■□□□ 1.05
NUP50-208ENST00000430547 TM4SF4P48230 202 aa21.64■■□□□ 1.05
NUP50-208ENST00000430547 GPR108Q9NPR9 543 aa21.64■■□□□ 1.05
NUP50-208ENST00000430547 CSADQ9Y600 493 aa21.64■■□□□ 1.05
NUP50-208ENST00000430547 UQCRFS1P1P0C7P4 283 aa21.63■■□□□ 1.05
NUP50-208ENST00000430547 TNNI3KQ59H18 835 aa21.63■■□□□ 1.05
NUP50-208ENST00000430547 DCAF15Q66K64 600 aa21.63■■□□□ 1.05
NUP50-208ENST00000430547 CDC42EP5Q6NZY7 148 aa21.63■■□□□ 1.05
NUP50-208ENST00000430547 ERICH6Q7L0X2 663 aa21.63■■□□□ 1.05
NUP50-208ENST00000430547 SPATA5Q8NB90 893 aa21.63■■□□□ 1.05
NUP50-208ENST00000430547 USP40Q9NVE5 1235 aa21.63■■□□□ 1.05
NUP50-208ENST00000430547 FPGT-TNNI3KV9GXZ4 949 aa21.63■■□□□ 1.05
NUP50-208ENST00000430547 DOCK2Q92608 1830 aa21.62■■□□□ 1.05
NUP50-208ENST00000430547 ARID4AP29374 1257 aaPredicted RBP21.62■■□□□ 1.05
NUP50-208ENST00000430547 INHBEP58166 350 aa21.62■■□□□ 1.05
NUP50-208ENST00000430547 CCDC158Q5M9N0 1113 aa21.62■■□□□ 1.05
NUP50-208ENST00000430547 CEP85Q6P2H3 762 aa21.62■■□□□ 1.05
NUP50-208ENST00000430547 ELP3Q9H9T3 547 aa21.62■■□□□ 1.05
NUP50-208ENST00000430547 HMG20BQ9P0W2 317 aa21.62■■□□□ 1.05
NUP50-208ENST00000430547 DDX19BQ9UMR2 479 aa21.62■■□□□ 1.05
NUP50-208ENST00000430547 MAP3K9P80192 1104 aa21.61■■□□□ 1.05
NUP50-208ENST00000430547 TCP10Q12799 353 aa21.61■■□□□ 1.05
NUP50-208ENST00000430547 TTC39AQ5SRH9 613 aa21.61■■□□□ 1.05
NUP50-208ENST00000430547 FAM151AQ8WW52 585 aa21.61■■□□□ 1.05
NUP50-208ENST00000430547 CHMP4BQ9H444 224 aaKnown RBP21.61■■□□□ 1.05
NUP50-208ENST00000430547 NOP58Q9Y2X3 529 aaKnown RBP21.61■■□□□ 1.05
NUP50-208ENST00000430547 ALDH1A1P00352 501 aa21.6■■□□□ 1.05
NUP50-208ENST00000430547 DGKZQ13574 1117 aa21.6■■□□□ 1.05
NUP50-208ENST00000430547 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.6■■□□□ 1.05
NUP50-208ENST00000430547 OPTNQ96CV9 577 aa21.6■■□□□ 1.05
NUP50-208ENST00000430547 ABHD8Q96I13 439 aa21.6■■□□□ 1.05
NUP50-208ENST00000430547 COG6Q9Y2V7 657 aa21.6■■□□□ 1.05
NUP50-208ENST00000430547 MAST2Q6P0Q8 1798 aa21.6■■□□□ 1.05
NUP50-208ENST00000430547 GAKO14976 1311 aa21.59■■□□□ 1.05
NUP50-208ENST00000430547 TBC1D8O95759 1140 aa21.59■■□□□ 1.05
NUP50-208ENST00000430547 GSTO1P78417 241 aa21.59■■□□□ 1.05
NUP50-208ENST00000430547 VGLL4Q14135 290 aa21.59■■□□□ 1.05
NUP50-208ENST00000430547 PI16Q6UXB8 463 aa21.59■■□□□ 1.05
NUP50-208ENST00000430547 ERC1Q8IUD2 1116 aa21.59■■□□□ 1.05
NUP50-208ENST00000430547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.59■■□□□ 1.05
NUP50-208ENST00000430547 WRNIP1Q96S55 665 aa21.59■■□□□ 1.05
NUP50-208ENST00000430547 RAI14Q9P0K7 980 aa21.59■■□□□ 1.05
NUP50-208ENST00000430547 MROH7-TTC4A0A0A0MT08 1334 aa21.58■■□□□ 1.05
NUP50-208ENST00000430547 MCAMP43121 646 aa21.58■■□□□ 1.05
NUP50-208ENST00000430547 MECOMQ03112 1051 aa21.58■■□□□ 1.05
NUP50-208ENST00000430547 NFIAQ12857 509 aa21.58■■□□□ 1.05
NUP50-208ENST00000430547 OTUD7BQ6GQQ9 843 aa21.58■■□□□ 1.05
NUP50-208ENST00000430547 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.58■■□□□ 1.05
NUP50-208ENST00000430547 DBNDD2Q9BQY9 259 aa21.58■■□□□ 1.05
NUP50-208ENST00000430547 ZNF341Q9BYN7 854 aa21.58■■□□□ 1.05
NUP50-208ENST00000430547 LRP2BPQ9P2M1 347 aa21.58■■□□□ 1.05
NUP50-208ENST00000430547 LDHCP07864 332 aa21.57■■□□□ 1.04
NUP50-208ENST00000430547 BTDP43251 543 aa21.57■■□□□ 1.04
NUP50-208ENST00000430547 HSP90AB4PQ58FF6 505 aa21.57■■□□□ 1.04
NUP50-208ENST00000430547 TBC1D9Q6ZT07 1266 aa21.57■■□□□ 1.04
NUP50-208ENST00000430547 IFNL1Q8IU54 200 aa21.57■■□□□ 1.04
NUP50-208ENST00000430547 FAM163AQ96GL9 167 aaPredicted RBP21.57■■□□□ 1.04
NUP50-208ENST00000430547 MCOLN1Q9GZU1 580 aa21.57■■□□□ 1.04
NUP50-208ENST00000430547 EXOC6BQ9Y2D4 811 aa21.57■■□□□ 1.04
NUP50-208ENST00000430547 MYO5AQ9Y4I1 1855 aaKnown RBP21.56■■□□□ 1.04
NUP50-208ENST00000430547 HMMRO75330 724 aa21.56■■□□□ 1.04
NUP50-208ENST00000430547 GJA5P36382 358 aa21.56■■□□□ 1.04
NUP50-208ENST00000430547 RGS3P49796 1198 aa21.56■■□□□ 1.04
NUP50-208ENST00000430547 MIGA2Q7L4E1 593 aa21.56■■□□□ 1.04
NUP50-208ENST00000430547 OTUD5Q96G74 571 aa21.56■■□□□ 1.04
NUP50-208ENST00000430547 FAM198AQ9UFP1 575 aa21.56■■□□□ 1.04
NUP50-208ENST00000430547 ZSCAN29Q8IWY8 852 aaPredicted RBP21.55■■□□□ 1.04
NUP50-208ENST00000430547 RPAP2Q8IXW5 612 aaPredicted RBP21.55■■□□□ 1.04
NUP50-208ENST00000430547 NOL10Q9BSC4 688 aaKnown RBP21.55■■□□□ 1.04
NUP50-208ENST00000430547 IDI2Q9BXS1 227 aa21.55■■□□□ 1.04
NUP50-208ENST00000430547 SNRKQ9NRH2 765 aa21.55■■□□□ 1.04
NUP50-208ENST00000430547 ENTPD3O75355 529 aa21.54■■□□□ 1.04
NUP50-208ENST00000430547 ZKSCAN4Q969J2 545 aaPredicted RBP21.54■■□□□ 1.04
NUP50-208ENST00000430547 NSUN4Q96CB9 384 aaKnown RBP21.54■■□□□ 1.04
NUP50-208ENST00000430547 CFHR5Q9BXR6 569 aa21.54■■□□□ 1.04
NUP50-208ENST00000430547 CCDC8Q9H0W5 538 aaPredicted RBP21.54■■□□□ 1.04
NUP50-208ENST00000430547 DBNLQ9UJU6 430 aaKnown RBP21.54■■□□□ 1.04
NUP50-208ENST00000430547 GPR75-ASB3A0A0A6YYF3 556 aa21.53■■□□□ 1.04
NUP50-208ENST00000430547 GPR25O00155 361 aa21.53■■□□□ 1.04
NUP50-208ENST00000430547 IGF2BP3O00425 579 aaKnown RBP eCLIP21.53■■□□□ 1.04
NUP50-208ENST00000430547 GTF2A2P52657 109 aa21.53■■□□□ 1.04
NUP50-208ENST00000430547 PICALMQ13492 652 aa21.53■■□□□ 1.04
NUP50-208ENST00000430547 NOM1Q5C9Z4 860 aaKnown RBP21.53■■□□□ 1.04
NUP50-208ENST00000430547 CTU1Q7Z7A3 348 aaKnown RBP21.53■■□□□ 1.04
NUP50-208ENST00000430547 ERO1BQ86YB8 467 aa21.53■■□□□ 1.04
NUP50-208ENST00000430547 ZNF296Q8WUU4 475 aaPredicted RBP21.53■■□□□ 1.04
NUP50-208ENST00000430547 CNKSR2Q8WXI2 1034 aa21.53■■□□□ 1.04
NUP50-208ENST00000430547 ZNF512BQ96KM6 892 aaPredicted RBP21.53■■□□□ 1.04
NUP50-208ENST00000430547 ZBTB40Q9NUA8 1239 aa21.53■■□□□ 1.04
NUP50-208ENST00000430547 SNCAIPQ9Y6H5 919 aa21.53■■□□□ 1.04
NUP50-208ENST00000430547 RFX7Q2KHR2 1363 aa21.52■■□□□ 1.04
NUP50-208ENST00000430547 SPDYE5A6NIY4 337 aa21.52■■□□□ 1.04
NUP50-208ENST00000430547 CCDC85CA6NKD9 419 aa21.52■■□□□ 1.04
NUP50-208ENST00000430547 PDE3AQ14432 1141 aa21.52■■□□□ 1.04
NUP50-208ENST00000430547 AACSQ86V21 672 aa21.52■■□□□ 1.04
NUP50-208ENST00000430547 EAF2Q96CJ1 260 aaPredicted RBP21.52■■□□□ 1.04
NUP50-208ENST00000430547 TLR7Q9NYK1 1049 aaKnown RBP21.52■■□□□ 1.04
NUP50-208ENST00000430547 CCL15-CCL14A0A0B4J2E2 113 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms