RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 EZH1Q92800 747 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 ZNF428Q96B54 188 aa5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 ASB16Q96NS5 453 aa5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 DZANK1Q9NVP4 752 aa5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P9-201ENST00000429856 CARMIL2Q6F5E8 1435 aa5.08□□□□□ -1.6
HMGB1P9-201ENST00000429856 LOC100289279A0A1B0GTE1 492 aa5.08□□□□□ -1.6
HMGB1P9-201ENST00000429856 NFKBIEO00221 500 aa5.08□□□□□ -1.6
HMGB1P9-201ENST00000429856 TREHO43280 583 aa5.08□□□□□ -1.6
HMGB1P9-201ENST00000429856 GALNT12Q8IXK2 581 aa5.08□□□□□ -1.6
HMGB1P9-201ENST00000429856 C2CD4AQ8NCU7 369 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P9-201ENST00000429856 BCL7CQ8WUZ0 217 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P9-201ENST00000429856 BSNDQ8WZ55 320 aa5.08□□□□□ -1.6
HMGB1P9-201ENST00000429856 NIF3L1Q9GZT8 377 aa5.08□□□□□ -1.6
HMGB1P9-201ENST00000429856 GZF1Q9H116 711 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P9-201ENST00000429856 SOX13Q9UN79 622 aa5.08□□□□□ -1.6
HMGB1P9-201ENST00000429856 EIF1AYO14602 144 aaKnown RBP5.07□□□□□ -1.6
HMGB1P9-201ENST00000429856 PLCB3Q01970 1234 aa5.07□□□□□ -1.6
HMGB1P9-201ENST00000429856 ORC1Q13415 861 aa5.07□□□□□ -1.6
HMGB1P9-201ENST00000429856 DSC3Q14574 896 aa5.07□□□□□ -1.6
HMGB1P9-201ENST00000429856 HGSNATQ68CP4 663 aa5.07□□□□□ -1.6
HMGB1P9-201ENST00000429856 TMEM102Q8N9M5 508 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P9-201ENST00000429856 FAM168AQ92567 244 aa5.07□□□□□ -1.6
HMGB1P9-201ENST00000429856 MISP3Q96FF7 219 aa5.07□□□□□ -1.6
HMGB1P9-201ENST00000429856 CSRNP1Q96S65 589 aa5.07□□□□□ -1.6
HMGB1P9-201ENST00000429856 OSMRQ99650 979 aa5.07□□□□□ -1.6
HMGB1P9-201ENST00000429856 SOX17Q9H6I2 414 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P9-201ENST00000429856 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
HMGB1P9-201ENST00000429856 NFICP08651 508 aa5.06□□□□□ -1.6
HMGB1P9-201ENST00000429856 CCDC27Q2M243 656 aa5.06□□□□□ -1.6
HMGB1P9-201ENST00000429856 ZNF765Q7L2R6 523 aa5.06□□□□□ -1.6
HMGB1P9-201ENST00000429856 BHLHE22Q8NFJ8 381 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P9-201ENST00000429856 GATA6Q92908 595 aa5.06□□□□□ -1.6
HMGB1P9-201ENST00000429856 FAM84AQ96KN4 292 aa5.06□□□□□ -1.6
HMGB1P9-201ENST00000429856 DLGAP3O95886 979 aa5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 POLR3DP05423 398 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 ERCC3P19447 782 aa5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 MFAP1P55081 439 aaKnown RBP5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 FGD1P98174 961 aa5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 ATP2B2Q01814 1243 aa5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 FMR1Q06787 632 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 KIAA0319Q5VV43 1072 aa5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 SPRED2Q7Z698 418 aa5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 FBF1Q8TES7 1133 aa5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 NXPE3Q969Y0 559 aa5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 ZKSCAN3Q9BRR0 538 aa5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 BHLHE41Q9C0J9 482 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P9-201ENST00000429856 TRPA1O75762 1119 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 ZNF865P0CJ78 1059 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 ACPPP15309 386 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 GSTM4Q03013 218 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 ENOX2Q16206 610 aaKnown RBP5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 CYP27C1Q4G0S4 372 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 HP1BP3Q5SSJ5 553 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 TMCO4Q5TGY1 634 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 PEAR1Q5VY43 1037 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 USPL1Q5W0Q7 1092 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 OGFOD3Q6PK18 319 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 VN1R5Q7Z5H4 357 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 CCDC74AQ96AQ1 378 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 TOX2Q96NM4 488 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 RC3H2Q9HBD1 1191 aaKnown RBP5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 ZFYVE1Q9HBF4 777 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 NPHS2Q9NP85 383 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 NLRP2Q9NX02 1062 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 FAM53CQ9NYF3 392 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 TRAK1Q9UPV9 953 aa5.04□□□□□ -1.6
HMGB1P9-201ENST00000429856 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 PNMA6FA0A0J9YX94 578 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 A0A1W2PP55 124 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 RAB6AP20340 208 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 FUT4P22083 530 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 MAPK8P45983 427 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 ALG1LQ6GMV1 187 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 LILRA6Q6PI73 481 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 ZNF574Q6ZN55 896 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 GLIS3Q8NEA6 775 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 ZSCAN18Q8TBC5 510 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 PI4K2BQ8TCG2 481 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 EHD4Q9H223 541 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 LIN7BQ9HAP6 207 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 LATS2Q9NRM7 1088 aa5.03□□□□□ -1.6
HMGB1P9-201ENST00000429856 ANKRD33BA6NCL7 494 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 GADD45BO75293 160 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 ADH5P11766 374 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 RAP1GAPP47736 663 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 BNIP3Q12983 259 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 DYMQ7RTS9 669 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 CCNJLQ8IV13 435 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 HHIPQ96QV1 700 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 SEMA6CQ9H3T2 930 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 RAD18Q9NS91 495 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 PPP4R2Q9NY27 417 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 VAV3Q9UKW4 847 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 ACTL7BQ9Y614 415 aa5.02□□□□□ -1.61
HMGB1P9-201ENST00000429856 LRRC10BA6NIK2 292 aa5.01□□□□□ -1.61
HMGB1P9-201ENST00000429856 PRRG2O14669 202 aa5.01□□□□□ -1.61
HMGB1P9-201ENST00000429856 ESRRAP11474 423 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P9-201ENST00000429856 PTPN12Q05209 780 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms