RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 LONRF3Q496Y0 759 aa18.79■□□□□ 0.6
RHBDF1-204ENST00000428730 C19orf44Q9H6X5 657 aa18.79■□□□□ 0.6
RHBDF1-204ENST00000428730 EIF3JO75822 258 aaKnown RBP18.79■□□□□ 0.6
RHBDF1-204ENST00000428730 SPECC1Q5M775 1068 aa18.79■□□□□ 0.6
RHBDF1-204ENST00000428730 RAD9BQ6WBX8 426 aa18.79■□□□□ 0.6
RHBDF1-204ENST00000428730 RICTORQ6R327 1708 aa18.79■□□□□ 0.6
RHBDF1-204ENST00000428730 ABL1P00519 1130 aa18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 HSPD1P10809 573 aaKnown RBP18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 ATP2B1P20020 1258 aa18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 MSANTD4Q8NCY6 345 aa18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 HAUS7Q99871 368 aa18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 TEX13AQ9BXU3 409 aaPredicted RBP18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 CDC23Q9UJX2 597 aa18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 TOPAZ1Q8N9V7 1692 aa18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 ZNF569Q5MCW4 686 aa18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 CPLX3Q8WVH0 158 aa18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 HPSEQ9Y251 543 aa18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 NFE2L3Q9Y4A8 694 aa18.78■□□□□ 0.6
RHBDF1-204ENST00000428730 GOLGA8BA8MQT2 603 aa18.77■□□□□ 0.6
RHBDF1-204ENST00000428730 SLC39A14Q15043 492 aa18.77■□□□□ 0.6
RHBDF1-204ENST00000428730 RNF216Q9NWF9 866 aaPredicted RBP18.77■□□□□ 0.6
RHBDF1-204ENST00000428730 HDAC5Q9UQL6 1122 aa18.77■□□□□ 0.6
RHBDF1-204ENST00000428730 UTYO14607 1347 aa18.77■□□□□ 0.6
RHBDF1-204ENST00000428730 CCDC175P0C221 793 aa18.77■□□□□ 0.6
RHBDF1-204ENST00000428730 KIF4BQ2VIQ3 1234 aa18.77■□□□□ 0.6
RHBDF1-204ENST00000428730 TEX2Q8IWB9 1127 aa18.77■□□□□ 0.6
RHBDF1-204ENST00000428730 KBTBD3Q8NAB2 608 aa18.77■□□□□ 0.6
RHBDF1-204ENST00000428730 PPM1EQ8WY54 764 aa18.77■□□□□ 0.6
RHBDF1-204ENST00000428730 NCAPGQ9BPX3 1015 aa18.77■□□□□ 0.6
RHBDF1-204ENST00000428730 KLF18A0A0U1RQI7 1052 aa18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 HSP90B2PQ58FF3 399 aa18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 BRAPQ7Z569 592 aa18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 NOA1Q8NC60 698 aaKnown RBP18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 BRMS1Q9HCU9 246 aa18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 SAMSN1Q9NSI8 373 aaKnown RBP18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 ERLIN1O75477 346 aa18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 CDC5LQ99459 802 aaKnown RBP18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 HPS5Q9UPZ3 1129 aa18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 ADGRG1Q9Y653 693 aa18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 SH3TC1Q8TE82 1336 aa18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 PTPN12Q05209 780 aaKnown RBP18.76■□□□□ 0.59
RHBDF1-204ENST00000428730 PALLDQ8WX93 1383 aa18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 RIC3Q7Z5B4 369 aa18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 CEP112Q8N8E3 955 aa18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 FAM71BQ8TC56 605 aa18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 MKRN1Q9UHC7 482 aaKnown RBP18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 TEX33O43247 280 aa18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 SLC35F6Q8N357 371 aa18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 RIN2Q8WYP3 895 aaPredicted RBP18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 SECISBP2LQ93073 1101 aaKnown RBP18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 MED15Q96RN5 788 aa18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 MYCBPQ99417 103 aaPredicted RBP18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 RAI14Q9P0K7 980 aa18.75■□□□□ 0.59
RHBDF1-204ENST00000428730 PTPRUQ92729 1446 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 KIF5CO60282 957 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 RNF40O75150 1001 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 MYL6BP14649 208 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 GRAMD1CQ8IYS0 662 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 STK11IPQ8N1F8 1099 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 DSCC1Q9BVC3 393 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 MAST3O60307 1309 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 CPLX1O14810 134 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 PRR29P0C7W0 189 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 C14orf37Q86TY3 774 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 GDAP1L1Q96MZ0 367 aa18.74■□□□□ 0.59
RHBDF1-204ENST00000428730 MRC1P22897 1456 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 NEURL1BA8MQ27 555 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 ZNF18P17022 549 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 RFX5P48382 616 aaPredicted RBP18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 MICALL1Q8N3F8 863 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 MYD88Q99836 296 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 DEF6Q9H4E7 631 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 RXRAP19793 462 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 PTPAQ15257 358 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 VPS37DQ86XT2 251 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 ACRBPQ8NEB7 543 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 MAN1B1Q9UKM7 699 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 PIK3C2AO00443 1686 aa18.73■□□□□ 0.59
RHBDF1-204ENST00000428730 MED1Q15648 1581 aaPredicted RBP18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 M0R2C6 588 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 PLEKHO1Q53GL0 409 aaPredicted RBP18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 NCAPH2Q6IBW4 605 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 NEUROD6Q96NK8 337 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 RABEP2Q9H5N1 569 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 AKR1B15C9JRZ8 316 aaPredicted RBP18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 POTEB2H3BUK9 544 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 PIP4K2AP48426 406 aaPredicted RBP18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 RBL2Q08999 1139 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 GCKRQ14397 625 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 RESP18Q5W5W9 173 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 KAT2BQ92831 832 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 LRRC59Q96AG4 307 aaKnown RBP18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 COPRSQ9NQ92 184 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 PAG1Q9NWQ8 432 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 KCNH3Q9ULD8 1083 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 KDM3BQ7LBC6 1761 aa18.72■□□□□ 0.59
RHBDF1-204ENST00000428730 PRC1O43663 620 aa18.71■□□□□ 0.59
RHBDF1-204ENST00000428730 PPFIA4O75335 1185 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms