RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 KLHDC4Q8TBB5 520 aa17.12■□□□□ 0.33
VEGFB-202ENST00000426086 BICC1Q9H694 974 aaKnown RBP17.12■□□□□ 0.33
VEGFB-202ENST00000426086 MROH5Q6ZUA9 1318 aa17.12■□□□□ 0.33
VEGFB-202ENST00000426086 WDHD1O75717 1129 aaPredicted RBP17.11■□□□□ 0.33
VEGFB-202ENST00000426086 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
VEGFB-202ENST00000426086 TBC1D22AQ8WUA7 517 aa17.11■□□□□ 0.33
VEGFB-202ENST00000426086 ZNF341Q9BYN7 854 aa17.11■□□□□ 0.33
VEGFB-202ENST00000426086 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
VEGFB-202ENST00000426086 GABRQQ9UN88 632 aa17.11■□□□□ 0.33
VEGFB-202ENST00000426086 KCNH4Q9UQ05 1017 aa17.11■□□□□ 0.33
VEGFB-202ENST00000426086 MYPNQ86TC9 1320 aa17.11■□□□□ 0.33
VEGFB-202ENST00000426086 RPAP1Q9BWH6 1393 aaPredicted RBP17.11■□□□□ 0.33
VEGFB-202ENST00000426086 FRAT2O75474 233 aaPredicted RBP17.1■□□□□ 0.33
VEGFB-202ENST00000426086 FMNL1O95466 1100 aaPredicted RBP17.1■□□□□ 0.33
VEGFB-202ENST00000426086 GJB1P08034 283 aa17.1■□□□□ 0.33
VEGFB-202ENST00000426086 PRKCZQ05513 592 aa17.1■□□□□ 0.33
VEGFB-202ENST00000426086 TCP10Q12799 353 aa17.1■□□□□ 0.33
VEGFB-202ENST00000426086 RABL6Q3YEC7 729 aaPredicted RBP17.1■□□□□ 0.33
VEGFB-202ENST00000426086 METTL24Q5JXM2 366 aa17.1■□□□□ 0.33
VEGFB-202ENST00000426086 FKBP1CQ5VVH2 108 aa17.1■□□□□ 0.33
VEGFB-202ENST00000426086 GPAT2Q6NUI2 795 aa17.1■□□□□ 0.33
VEGFB-202ENST00000426086 RAET1EQ8TD07 263 aa17.1■□□□□ 0.33
VEGFB-202ENST00000426086 MRIQ9BWK5 157 aa17.1■□□□□ 0.33
VEGFB-202ENST00000426086 RNF208Q9H0X6 261 aa17.1■□□□□ 0.33
VEGFB-202ENST00000426086 TMOD2Q9NZR1 351 aa17.1■□□□□ 0.33
VEGFB-202ENST00000426086 ZNF112Q9UJU3 913 aa17.1■□□□□ 0.33
VEGFB-202ENST00000426086 PDE8BO95263 885 aa17.09■□□□□ 0.33
VEGFB-202ENST00000426086 CYP2C8P10632 490 aa17.09■□□□□ 0.33
VEGFB-202ENST00000426086 BCRP11274 1271 aa17.09■□□□□ 0.33
VEGFB-202ENST00000426086 NFIAQ12857 509 aa17.09■□□□□ 0.33
VEGFB-202ENST00000426086 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
VEGFB-202ENST00000426086 CAVIN4Q5BKX8 364 aa17.09■□□□□ 0.33
VEGFB-202ENST00000426086 DCAF15Q66K64 600 aa17.09■□□□□ 0.33
VEGFB-202ENST00000426086 HHIPL2Q6UWX4 724 aa17.09■□□□□ 0.33
VEGFB-202ENST00000426086 WDR63Q8IWG1 891 aa17.09■□□□□ 0.33
VEGFB-202ENST00000426086 UNC93B1Q9H1C4 597 aa17.09■□□□□ 0.33
VEGFB-202ENST00000426086 UTYO14607 1347 aa17.09■□□□□ 0.33
VEGFB-202ENST00000426086 SOX1O00570 391 aaPredicted RBP17.08■□□□□ 0.32
VEGFB-202ENST00000426086 FGFR2P21802 821 aa17.08■□□□□ 0.32
VEGFB-202ENST00000426086 ZFPM1Q8IX07 1006 aa17.08■□□□□ 0.32
VEGFB-202ENST00000426086 U2AF1L4Q8WU68 220 aaKnown RBP17.08■□□□□ 0.32
VEGFB-202ENST00000426086 FAM151AQ8WW52 585 aa17.08■□□□□ 0.32
VEGFB-202ENST00000426086 MGAMO43451 1857 aa17.07■□□□□ 0.32
VEGFB-202ENST00000426086 ZBTB7BO15156 539 aaPredicted RBP17.07■□□□□ 0.32
VEGFB-202ENST00000426086 SLURP2P0DP57 97 aa17.07■□□□□ 0.32
VEGFB-202ENST00000426086 HOXD10P28358 340 aa17.07■□□□□ 0.32
VEGFB-202ENST00000426086 DIXDC1Q155Q3 683 aa17.07■□□□□ 0.32
VEGFB-202ENST00000426086 CDC42EP5Q6NZY7 148 aa17.07■□□□□ 0.32
VEGFB-202ENST00000426086 NKX2-3Q8TAU0 364 aa17.07■□□□□ 0.32
VEGFB-202ENST00000426086 HOOK2Q96ED9 719 aa17.07■□□□□ 0.32
VEGFB-202ENST00000426086 FAM198AQ9UFP1 575 aa17.07■□□□□ 0.32
VEGFB-202ENST00000426086 DAGLAQ9Y4D2 1042 aa17.07■□□□□ 0.32
VEGFB-202ENST00000426086 FARP2O94887 1054 aaPredicted RBP17.06■□□□□ 0.32
VEGFB-202ENST00000426086 NOL9Q5SY16 702 aaKnown RBP17.06■□□□□ 0.32
VEGFB-202ENST00000426086 HTATIP2Q9BUP3 242 aa17.06■□□□□ 0.32
VEGFB-202ENST00000426086 BIN2Q9UBW5 565 aaPredicted RBP17.06■□□□□ 0.32
VEGFB-202ENST00000426086 CEP290O15078 2479 aa17.05■□□□□ 0.32
VEGFB-202ENST00000426086 MAST3O60307 1309 aa17.05■□□□□ 0.32
VEGFB-202ENST00000426086 ELNP15502 786 aa17.05■□□□□ 0.32
VEGFB-202ENST00000426086 PRDX5P30044 214 aa17.05■□□□□ 0.32
VEGFB-202ENST00000426086 LRCH3Q96II8 777 aa17.05■□□□□ 0.32
VEGFB-202ENST00000426086 SUGT1Q9Y2Z0 365 aa17.05■□□□□ 0.32
VEGFB-202ENST00000426086 ATRNL1Q5VV63 1379 aa17.04■□□□□ 0.32
VEGFB-202ENST00000426086 AK9Q5TCS8 1911 aa17.04■□□□□ 0.32
VEGFB-202ENST00000426086 DLL1O00548 723 aa17.04■□□□□ 0.32
VEGFB-202ENST00000426086 SGPL1O95470 568 aa17.04■□□□□ 0.32
VEGFB-202ENST00000426086 FCGRTP55899 365 aa17.04■□□□□ 0.32
VEGFB-202ENST00000426086 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
VEGFB-202ENST00000426086 SZT2Q5T011 3432 aa17.03■□□□□ 0.32
VEGFB-202ENST00000426086 PHF20L1A8MW92 1017 aa17.03■□□□□ 0.32
VEGFB-202ENST00000426086 RFX5P48382 616 aaPredicted RBP17.03■□□□□ 0.32
VEGFB-202ENST00000426086 UBXN2AP68543 259 aa17.03■□□□□ 0.32
VEGFB-202ENST00000426086 SLC17A8Q8NDX2 589 aa17.03■□□□□ 0.32
VEGFB-202ENST00000426086 PARK7Q99497 189 aaKnown RBP17.03■□□□□ 0.32
VEGFB-202ENST00000426086 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.03■□□□□ 0.32
VEGFB-202ENST00000426086 ALPK3Q96L96 1907 aa17.03■□□□□ 0.32
VEGFB-202ENST00000426086 ADCY3O60266 1144 aa17.02■□□□□ 0.32
VEGFB-202ENST00000426086 IFIT1P09914 478 aaKnown RBP17.02■□□□□ 0.32
VEGFB-202ENST00000426086 FLT3LGP49771 235 aa17.02■□□□□ 0.32
VEGFB-202ENST00000426086 PUM3Q15397 648 aaKnown RBP17.02■□□□□ 0.32
VEGFB-202ENST00000426086 SLAIN1Q8ND83 568 aa17.02■□□□□ 0.32
VEGFB-202ENST00000426086 STAP2Q9UGK3 403 aa17.02■□□□□ 0.32
VEGFB-202ENST00000426086 NR2E3Q9Y5X4 410 aa17.02■□□□□ 0.32
VEGFB-202ENST00000426086 KIF16BQ96L93 1317 aa17.01■□□□□ 0.31
VEGFB-202ENST00000426086 A0A0G2JLL6 359 aaPredicted RBP17.01■□□□□ 0.31
VEGFB-202ENST00000426086 CXCL11O14625 94 aa17.01■□□□□ 0.31
VEGFB-202ENST00000426086 INHAP05111 366 aa17.01■□□□□ 0.31
VEGFB-202ENST00000426086 SH3BP5LQ7L8J4 393 aa17.01■□□□□ 0.31
VEGFB-202ENST00000426086 PRRT2Q7Z6L0 340 aaPredicted RBP17.01■□□□□ 0.31
VEGFB-202ENST00000426086 CCDC84Q86UT8 332 aaPredicted RBP17.01■□□□□ 0.31
VEGFB-202ENST00000426086 WDR66Q8TBY9 1149 aa17.01■□□□□ 0.31
VEGFB-202ENST00000426086 USP44Q9H0E7 712 aa17.01■□□□□ 0.31
VEGFB-202ENST00000426086 MRS2Q9HD23 443 aa17.01■□□□□ 0.31
VEGFB-202ENST00000426086 USP40Q9NVE5 1235 aa17.01■□□□□ 0.31
VEGFB-202ENST00000426086 ZHX2Q9Y6X8 837 aa17.01■□□□□ 0.31
VEGFB-202ENST00000426086 PTPRFP10586 1907 aa17■□□□□ 0.31
VEGFB-202ENST00000426086 PTPRAP18433 802 aa17■□□□□ 0.31
VEGFB-202ENST00000426086 ATG9AQ7Z3C6 839 aa17■□□□□ 0.31
VEGFB-202ENST00000426086 DIS3LQ8TF46 1054 aaKnown RBP17■□□□□ 0.31
VEGFB-202ENST00000426086 DEFB118Q96PH6 123 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms