RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ADM5C9JUS6 153 aa29.68■■■□□ 2.34
VEGFA-209ENST00000425836 PDE6AP16499 860 aa29.68■■■□□ 2.34
VEGFA-209ENST00000425836 APOBEC3FQ8IUX4 373 aaKnown RBP29.68■■■□□ 2.34
VEGFA-209ENST00000425836 KBTBD3Q8NAB2 608 aa29.68■■■□□ 2.34
VEGFA-209ENST00000425836 TMED8Q6PL24 325 aaPredicted RBP29.67■■■□□ 2.34
VEGFA-209ENST00000425836 DLK2Q6UY11 383 aa29.67■■■□□ 2.34
VEGFA-209ENST00000425836 USP40Q9NVE5 1235 aa29.67■■■□□ 2.34
VEGFA-209ENST00000425836 TRAF5O00463 557 aa29.66■■■□□ 2.34
VEGFA-209ENST00000425836 CACNB3P54284 484 aa29.65■■■□□ 2.34
VEGFA-209ENST00000425836 FMR1Q06787 632 aaKnown RBP eCLIP29.65■■■□□ 2.34
VEGFA-209ENST00000425836 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.65■■■□□ 2.341e-12■■■□□ 17.3
VEGFA-209ENST00000425836 TCRBV5S4A2TA0A5A2 114 aa29.64■■■□□ 2.34
VEGFA-209ENST00000425836 ADD2P35612 726 aa29.64■■■□□ 2.34
VEGFA-209ENST00000425836 C1QTNF8P60827 252 aa29.64■■■□□ 2.34
VEGFA-209ENST00000425836 PASKQ96RG2 1323 aa29.64■■■□□ 2.34
VEGFA-209ENST00000425836 ZNF532Q9HCE3 1301 aa29.64■■■□□ 2.34
VEGFA-209ENST00000425836 CHGBP05060 677 aa29.64■■■□□ 2.33
VEGFA-209ENST00000425836 RHBDL3P58872 404 aa29.64■■■□□ 2.33
VEGFA-209ENST00000425836 DEFB129Q9H1M3 183 aa29.64■■■□□ 2.33
VEGFA-209ENST00000425836 TMOD2Q9NZR1 351 aa29.64■■■□□ 2.33
VEGFA-209ENST00000425836 TCP10L2B9ZVM9 353 aa29.63■■■□□ 2.33
VEGFA-209ENST00000425836 PPP4CP60510 307 aa29.63■■■□□ 2.33
VEGFA-209ENST00000425836 SLFNL1Q499Z3 407 aa29.63■■■□□ 2.33
VEGFA-209ENST00000425836 AATFQ9NY61 560 aaKnown RBP eCLIP29.63■■■□□ 2.33
VEGFA-209ENST00000425836 BAG3O95817 575 aa29.62■■■□□ 2.33
VEGFA-209ENST00000425836 FKBP1CQ5VVH2 108 aa29.62■■■□□ 2.33
VEGFA-209ENST00000425836 ZSCAN25Q6NSZ9 544 aa29.62■■■□□ 2.33
VEGFA-209ENST00000425836 MIGA1Q8NAN2 632 aa29.62■■■□□ 2.33
VEGFA-209ENST00000425836 EVI5LQ96CN4 794 aa29.62■■■□□ 2.33
VEGFA-209ENST00000425836 NOL10Q9BSC4 688 aaKnown RBP29.62■■■□□ 2.33
VEGFA-209ENST00000425836 DOCK2Q92608 1830 aa29.61■■■□□ 2.33
VEGFA-209ENST00000425836 TNFAIP1Q13829 316 aa29.61■■■□□ 2.33
VEGFA-209ENST00000425836 UBE3CQ15386 1083 aa29.61■■■□□ 2.33
VEGFA-209ENST00000425836 SKAP1Q86WV1 359 aa29.61■■■□□ 2.33
VEGFA-209ENST00000425836 MYO5AQ9Y4I1 1855 aaKnown RBP29.6■■■□□ 2.33
VEGFA-209ENST00000425836 NFIAQ12857 509 aa29.6■■■□□ 2.33
VEGFA-209ENST00000425836 RASA3Q14644 834 aa29.6■■■□□ 2.33
VEGFA-209ENST00000425836 PRAMEF18Q5VWM3 479 aa29.6■■■□□ 2.33
VEGFA-209ENST00000425836 FSD1Q9BTV5 496 aa29.6■■■□□ 2.33
VEGFA-209ENST00000425836 MAST2Q6P0Q8 1798 aa29.6■■■□□ 2.33
VEGFA-209ENST00000425836 MYH2Q9UKX2 1941 aa29.6■■■□□ 2.33
VEGFA-209ENST00000425836 DYNLL1P63167 89 aaKnown RBP29.6■■■□□ 2.33
VEGFA-209ENST00000425836 SH3RF3Q8TEJ3 882 aaPredicted RBP29.6■■■□□ 2.33
VEGFA-209ENST00000425836 WDHD1O75717 1129 aaPredicted RBP29.59■■■□□ 2.33
VEGFA-209ENST00000425836 CDCA5Q96FF9 252 aa29.59■■■□□ 2.33
VEGFA-209ENST00000425836 IDI2Q9BXS1 227 aa29.59■■■□□ 2.33
VEGFA-209ENST00000425836 CNTNAP1P78357 1384 aa29.58■■■□□ 2.33
VEGFA-209ENST00000425836 TRIM6-TRIM34B2RNG4 842 aa29.58■■■□□ 2.33
VEGFA-209ENST00000425836 RNF113AO15541 343 aaKnown RBP29.58■■■□□ 2.33
VEGFA-209ENST00000425836 PLCG2P16885 1265 aa29.58■■■□□ 2.33
VEGFA-209ENST00000425836 TNNI2P48788 182 aa29.58■■■□□ 2.33
VEGFA-209ENST00000425836 TTC22Q5TAA0 569 aa29.58■■■□□ 2.33
VEGFA-209ENST00000425836 FAM83AQ86UY5 434 aa29.58■■■□□ 2.33
VEGFA-209ENST00000425836 FAM198AQ9UFP1 575 aa29.58■■■□□ 2.33
VEGFA-209ENST00000425836 PPP2R3BQ9Y5P8 575 aa29.58■■■□□ 2.33
VEGFA-209ENST00000425836 RIOK1Q9BRS2 568 aaKnown RBP29.57■■■□□ 2.32
VEGFA-209ENST00000425836 MAGEB6P1A0A0J9YX57 407 aa29.56■■■□□ 2.32
VEGFA-209ENST00000425836 ZFYP08048 801 aaPredicted RBP29.56■■■□□ 2.32
VEGFA-209ENST00000425836 LRRFIP1Q32MZ4 808 aaKnown RBP29.56■■■□□ 2.32
VEGFA-209ENST00000425836 TEX11Q8IYF3 940 aa29.56■■■□□ 2.32
VEGFA-209ENST00000425836 RILPL2Q969X0 211 aa29.56■■■□□ 2.32
VEGFA-209ENST00000425836 TMEM39BQ9GZU3 492 aa29.56■■■□□ 2.32
VEGFA-209ENST00000425836 RFX7Q2KHR2 1363 aa29.56■■■□□ 2.32
VEGFA-209ENST00000425836 GSPT1P15170 499 aaKnown RBP29.56■■■□□ 2.32
VEGFA-209ENST00000425836 RGS3P49796 1198 aa29.56■■■□□ 2.32
VEGFA-209ENST00000425836 DDX4Q9NQI0 724 aaKnown RBP29.56■■■□□ 2.32
VEGFA-209ENST00000425836 TCP10Q12799 353 aa29.55■■■□□ 2.32
VEGFA-209ENST00000425836 CST9Q5W186 159 aa29.55■■■□□ 2.32
VEGFA-209ENST00000425836 CERS3Q8IU89 383 aa29.55■■■□□ 2.32
VEGFA-209ENST00000425836 TEPSINQ96N21 525 aa29.55■■■□□ 2.32
VEGFA-209ENST00000425836 CELF2O95319 508 aaKnown RBP29.54■■■□□ 2.32
VEGFA-209ENST00000425836 ZFPM1Q8IX07 1006 aa29.54■■■□□ 2.32
VEGFA-209ENST00000425836 FAM151AQ8WW52 585 aa29.54■■■□□ 2.32
VEGFA-209ENST00000425836 PUS7LQ9H0K6 701 aaKnown RBP29.54■■■□□ 2.32
VEGFA-209ENST00000425836 ZNF408Q9H9D4 720 aa29.54■■■□□ 2.32
VEGFA-209ENST00000425836 ECM29Q5VYK3 1845 aa29.53■■■□□ 2.32
VEGFA-209ENST00000425836 ENTPD3O75355 529 aa29.53■■■□□ 2.32
VEGFA-209ENST00000425836 APLP1P51693 650 aa29.53■■■□□ 2.32
VEGFA-209ENST00000425836 PICALMQ13492 652 aa29.53■■■□□ 2.32
VEGFA-209ENST00000425836 CDAN1Q8IWY9 1227 aa29.53■■■□□ 2.32
VEGFA-209ENST00000425836 APPBP2Q92624 585 aa29.53■■■□□ 2.32
VEGFA-209ENST00000425836 POLR2AP24928 1970 aaKnown RBP29.53■■■□□ 2.32
VEGFA-209ENST00000425836 NPM3O75607 178 aaKnown RBP29.52■■■□□ 2.32
VEGFA-209ENST00000425836 NBPF12Q5TAG4 269 aaPredicted RBP29.52■■■□□ 2.32
VEGFA-209ENST00000425836 OSBP2Q969R2 916 aa29.52■■■□□ 2.32
VEGFA-209ENST00000425836 MBD4O95243 580 aa29.52■■■□□ 2.32
VEGFA-209ENST00000425836 TICAM2Q86XR7 235 aa29.52■■■□□ 2.32
VEGFA-209ENST00000425836 LCORLQ8N3X6 602 aa29.52■■■□□ 2.32
VEGFA-209ENST00000425836 TGFBRAP1Q8WUH2 860 aa29.52■■■□□ 2.32
VEGFA-209ENST00000425836 ARMT1Q9H993 441 aa29.52■■■□□ 2.32
VEGFA-209ENST00000425836 SDSP20132 328 aa29.5■■■□□ 2.31
VEGFA-209ENST00000425836 SUPT20HL1Q3ZLR7 823 aa29.5■■■□□ 2.31
VEGFA-209ENST00000425836 ZMYM1Q5SVZ6 1142 aa29.5■■■□□ 2.31
VEGFA-209ENST00000425836 TMEM88BA6NKF7 163 aa29.49■■■□□ 2.31
VEGFA-209ENST00000425836 AIDAQ96BJ3 306 aa29.49■■■□□ 2.31
VEGFA-209ENST00000425836 HSPA6P17066 643 aa29.48■■■□□ 2.31
VEGFA-209ENST00000425836 SH3BP5LQ7L8J4 393 aa29.48■■■□□ 2.31
VEGFA-209ENST00000425836 MAPKAPK5Q8IW41 473 aa29.48■■■□□ 2.31
VEGFA-209ENST00000425836 OSBPL5Q9H0X9 879 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-209ENST00000425836 RPAP1Q9BWH6 1393 aaPredicted RBP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms