RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TADA2BQ86TJ2 420 aa12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 VSTM4Q8IW00 320 aa12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 LINC00301Q8NCQ3 95 aa12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 AIFM3Q96NN9 605 aa12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 MROH7-TTC4A0A0A0MT08 1334 aa12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 SPTLC2O15270 562 aa12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 CCDC91Q7Z6B0 441 aa12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 JPH2Q9BR39 696 aaPredicted RBP12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 SUFUQ9UMX1 484 aa12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 PDE6BP35913 854 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 MAP2K2P36507 400 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 NLRP6P59044 892 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 TC2NQ8N9U0 490 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 TFR2Q9UP52 801 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 PIK3C2AO00443 1686 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 ANKARQ7Z5J8 1434 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 EXOC5O00471 708 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 CCP110O43303 1012 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 SRGAP1Q7Z6B7 1085 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 CEP120Q8N960 986 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 FMN2Q9NZ56 1722 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 KIF28PB7ZC32 967 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 ERLIN2O94905 339 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 FDPSP14324 419 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 HAND2P61296 217 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 MCTP2Q6DN12 878 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 MMS22LQ6ZRQ5 1243 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 FOXP4Q8IVH2 680 aaPredicted RBP12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 ANKRD20A12PQ8NF67 263 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 CEP89Q96ST8 783 aa12.92□□□□□ -0.34
SEC61A1-202ENST00000424880 ENC1O14682 589 aa12.91□□□□□ -0.34
SEC61A1-202ENST00000424880 RXRAP19793 462 aa12.91□□□□□ -0.34
SEC61A1-202ENST00000424880 MYL5Q02045 173 aa12.91□□□□□ -0.34
SEC61A1-202ENST00000424880 G3BP1Q13283 466 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEC61A1-202ENST00000424880 PROSER3Q2NL68 480 aa12.91□□□□□ -0.34
SEC61A1-202ENST00000424880 GRAMD1CQ8IYS0 662 aa12.91□□□□□ -0.34
SEC61A1-202ENST00000424880 MED4Q9NPJ6 270 aa12.91□□□□□ -0.34
SEC61A1-202ENST00000424880 RAI14Q9P0K7 980 aa12.91□□□□□ -0.34
SEC61A1-202ENST00000424880 AMPHP49418 695 aa12.91□□□□□ -0.34
SEC61A1-202ENST00000424880 SAMSN1Q9NSI8 373 aaKnown RBP12.91□□□□□ -0.34
SEC61A1-202ENST00000424880 MAP3K2Q9Y2U5 619 aa12.91□□□□□ -0.34
SEC61A1-202ENST00000424880 EIF3JO75822 258 aaKnown RBP12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 SCP2P22307 547 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 BRD3Q15059 726 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 IGSF22Q8N9C0 903 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 ACRBPQ8NEB7 543 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 SMARCC2Q8TAQ2 1214 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 TEX33O43247 280 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 BMP6P22004 513 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 HNRNPH1P31943 449 aaKnown RBP12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 HSP90AB4PQ58FF6 505 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 RAD9BQ6WBX8 426 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 ABTB2Q8N961 1025 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 SRGAP2O75044 1071 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 SYKP43405 635 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 KCNV1Q6PIU1 500 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 SYNE3Q6ZMZ3 975 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 SLC35F6Q8N357 371 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 LGR6Q9HBX8 967 aa12.9□□□□□ -0.34
SEC61A1-202ENST00000424880 MYO1FO00160 1098 aa12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 FMR1Q06787 632 aaKnown RBP eCLIP12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 KLHL10Q6JEL2 608 aa12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 KIRREL3Q8IZU9 778 aa12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 CAPZA3Q96KX2 299 aa12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 HDAC6Q9UBN7 1215 aa12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 STX17P56962 302 aa12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 SATB1Q01826 763 aa12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 NAA16Q6N069 864 aaPredicted RBP12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 MSL3Q8N5Y2 521 aaKnown RBP12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 SUCLG2Q96I99 432 aa12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 PCDHA5Q9Y5H7 936 aa12.89□□□□□ -0.35
SEC61A1-202ENST00000424880 FRMD3A2A2Y4 597 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 UBE2Q2LH0YL09 131 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 PFKFB2O60825 505 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 SYF2O95926 243 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 RPAINQ86UA6 219 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 TRIM10Q9UDY6 481 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 NFE2L3Q9Y4A8 694 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 MARF1Q9Y4F3 1742 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 PPFIA4O75335 1185 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 PDIA3P30101 505 aaKnown RBP12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 TDO2P48775 406 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 HSP90AB3PQ58FF7 597 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 EFCAB13Q8IY85 973 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 AFAP1L1Q8TED9 768 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 C8orf76Q96K31 380 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 KAT14Q9H8E8 782 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 CD248Q9HCU0 757 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 ERLIN1O75477 346 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 GGCXP38435 758 aa12.88□□□□□ -0.35
SEC61A1-202ENST00000424880 SMARCC1Q92922 1105 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms