RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
SDCBPP2-201ENST00000424643 GGT7Q9UJ14 662 aa6.32□□□□□ -1.4
SDCBPP2-201ENST00000424643 BAZ1BQ9UIG0 1483 aaKnown RBP6.32□□□□□ -1.4
SDCBPP2-201ENST00000424643 A0A1W2PP55 124 aa6.31□□□□□ -1.4
SDCBPP2-201ENST00000424643 ARL4DP49703 201 aa6.31□□□□□ -1.4
SDCBPP2-201ENST00000424643 RACK1P63244 317 aaKnown RBP6.31□□□□□ -1.4
SDCBPP2-201ENST00000424643 PTPN12Q05209 780 aaKnown RBP6.31□□□□□ -1.4
SDCBPP2-201ENST00000424643 NBPF11Q86T75 865 aa6.31□□□□□ -1.4
SDCBPP2-201ENST00000424643 ARMC10Q8N2F6 343 aa6.31□□□□□ -1.4
SDCBPP2-201ENST00000424643 CEP41Q9BYV8 373 aa6.31□□□□□ -1.4
SDCBPP2-201ENST00000424643 TANGO6Q9C0B7 1094 aa6.31□□□□□ -1.4
SDCBPP2-201ENST00000424643 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
SDCBPP2-201ENST00000424643 EHD4Q9H223 541 aa6.31□□□□□ -1.4
SDCBPP2-201ENST00000424643 GNL2Q13823 731 aaKnown RBP6.3□□□□□ -1.4
SDCBPP2-201ENST00000424643 SPRED3Q2MJR0 410 aa6.3□□□□□ -1.4
SDCBPP2-201ENST00000424643 ZNF654Q8IZM8 581 aa6.3□□□□□ -1.4
SDCBPP2-201ENST00000424643 UTP4Q969X6 686 aaKnown RBP6.3□□□□□ -1.4
SDCBPP2-201ENST00000424643 RUSC1Q9BVN2 902 aa6.3□□□□□ -1.4
SDCBPP2-201ENST00000424643 DDX41Q9UJV9 622 aaKnown RBP6.3□□□□□ -1.4
SDCBPP2-201ENST00000424643 A0A096LPE4 126 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 A0A1W2PPZ6 126 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 BTBD11A6QL63 1104 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 ESRRAP11474 423 aaPredicted RBP6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 FSTP19883 344 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 GSTT1P30711 240 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 GRIA4P48058 902 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 ST13P50502 369 aaKnown RBP6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 KIAA0319Q5VV43 1072 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 SLC43A3Q8NBI5 491 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 FAM46AQ96IP4 442 aaKnown RBP6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 TCF12Q99081 682 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 USP26Q9BXU7 913 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 LIN7BQ9HAP6 207 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 PPP4R2Q9NY27 417 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 STOML1Q9UBI4 398 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 PRKAG2Q9UGJ0 569 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 TTF2Q9UNY4 1162 aaKnown RBP6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 TRAK1Q9UPV9 953 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 INPP5FQ9Y2H2 1132 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 RAXQ9Y2V3 346 aa6.29□□□□□ -1.4
SDCBPP2-201ENST00000424643 DHX15O43143 795 aaKnown RBP6.28□□□□□ -1.4
SDCBPP2-201ENST00000424643 SART1O43290 800 aaKnown RBP6.28□□□□□ -1.4
SDCBPP2-201ENST00000424643 DLGAP3O95886 979 aa6.28□□□□□ -1.4
SDCBPP2-201ENST00000424643 DNAJA1P31689 397 aaKnown RBP6.28□□□□□ -1.4
SDCBPP2-201ENST00000424643 FCGRTP55899 365 aa6.28□□□□□ -1.4
SDCBPP2-201ENST00000424643 GSTM4Q03013 218 aa6.28□□□□□ -1.4
SDCBPP2-201ENST00000424643 CCNJLQ8IV13 435 aa6.28□□□□□ -1.4
SDCBPP2-201ENST00000424643 GLIS3Q8NEA6 775 aa6.28□□□□□ -1.4
SDCBPP2-201ENST00000424643 RNF208Q9H0X6 261 aa6.28□□□□□ -1.4
SDCBPP2-201ENST00000424643 PREPP48147 710 aa6.27□□□□□ -1.41
SDCBPP2-201ENST00000424643 ZNF423Q2M1K9 1284 aa6.27□□□□□ -1.41
SDCBPP2-201ENST00000424643 COPRSQ9NQ92 184 aa6.27□□□□□ -1.41
SDCBPP2-201ENST00000424643 LOC100289279A0A1B0GTE1 492 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 HMX2A2RU54 273 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 HYAL3O43820 417 aaPredicted RBP6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 BMP3P12645 472 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 ATP2B1P20020 1258 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 PCDH1Q08174 1060 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 NUTM2GQ5VZR2 741 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 ANKRD34AQ69YU3 496 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 FDX2Q6P4F2 183 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 ERMP1Q7Z2K6 904 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 TRIM42Q8IWZ5 723 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 C12orf50Q8NA57 414 aaPredicted RBP6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 C3orf58Q8NDZ4 430 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 MYRFLQ96LU7 910 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 CLEC4MQ9H2X3 399 aaPredicted RBP6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 KCNF1Q9H3M0 494 aa6.26□□□□□ -1.41
SDCBPP2-201ENST00000424643 DRD2P14416 443 aa6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 ARID5AQ03989 594 aa6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 UVSSAQ2YD98 709 aa6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 PRPF40BQ6NWY9 871 aaKnown RBP6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 DTHD1Q6ZMT9 781 aa6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 FAM20CQ8IXL6 584 aa6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 DHX38Q92620 1227 aaKnown RBP6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 NOC4LQ9BVI4 516 aaKnown RBP6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 SOX17Q9H6I2 414 aaPredicted RBP6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 C7orf69Q9H7B7 122 aa6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 ABCB6Q9NP58 842 aa6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 KBTBD4Q9NVX7 518 aa6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 RNF112Q9ULX5 631 aa6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 AKAP2Q9Y2D5 859 aa6.25□□□□□ -1.41
SDCBPP2-201ENST00000424643 TMEM238LA0A1B0GVL6 79 aa6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 MEGF11A6BM72 1044 aa6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 F6X3S4 739 aa6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 FBXO24O75426 580 aa6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 IGLV1-40P01703 118 aa6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 GTF2F1P35269 517 aaKnown RBP eCLIP6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 PAK2Q13177 524 aa6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 LRP8Q14114 963 aa6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 CCDC85BQ15834 202 aaPredicted RBP6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 BEND4Q6ZU67 534 aa6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 GMLQ99445 158 aa6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 DNAJC2Q99543 621 aaKnown RBP6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 TRIM56Q9BRZ2 755 aaKnown RBP6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 TMPRSS13Q9BYE2 586 aa6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 GOLGA2P5Q9HBQ8 144 aa6.24□□□□□ -1.41
SDCBPP2-201ENST00000424643 CFTRP13569 1480 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms