RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 ZC3H15Q8WU90 426 aaKnown RBP12.01□□□□□ -0.49
HDLBP-209ENST00000422933 AIDAQ96BJ3 306 aa12.01□□□□□ -0.49
HDLBP-209ENST00000422933 DCPSQ96C86 337 aaKnown RBP12.01□□□□□ -0.49
HDLBP-209ENST00000422933 EDC3Q96F86 508 aaKnown RBP12.01□□□□□ -0.49
HDLBP-209ENST00000422933 TAF1DQ9H5J8 278 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-209ENST00000422933 ZNF532Q9HCE3 1301 aa12.01□□□□□ -0.49
HDLBP-209ENST00000422933 RFX7Q2KHR2 1363 aa12.01□□□□□ -0.49
HDLBP-209ENST00000422933 MAGEB6P1A0A0J9YX57 407 aa12□□□□□ -0.49
HDLBP-209ENST00000422933 SDSP20132 328 aa12□□□□□ -0.49
HDLBP-209ENST00000422933 BTDP43251 543 aa12□□□□□ -0.49
HDLBP-209ENST00000422933 DIXDC1Q155Q3 683 aa12□□□□□ -0.49
HDLBP-209ENST00000422933 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
HDLBP-209ENST00000422933 AMOTL1Q8IY63 956 aa12□□□□□ -0.49
HDLBP-209ENST00000422933 APPBP2Q92624 585 aa12□□□□□ -0.49
HDLBP-209ENST00000422933 CRNKL1Q9BZJ0 848 aaKnown RBP12□□□□□ -0.49
HDLBP-209ENST00000422933 USP40Q9NVE5 1235 aa12□□□□□ -0.49
HDLBP-209ENST00000422933 ZNF646O15015 1829 aaPredicted RBP12□□□□□ -0.49
HDLBP-209ENST00000422933 GPR75-ASB3A0A0A6YYF3 556 aa11.99□□□□□ -0.49
HDLBP-209ENST00000422933 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
HDLBP-209ENST00000422933 CAPN15O75808 1086 aa11.99□□□□□ -0.49
HDLBP-209ENST00000422933 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
HDLBP-209ENST00000422933 GNAT2P19087 354 aa11.99□□□□□ -0.49
HDLBP-209ENST00000422933 APOBEC3FQ8IUX4 373 aaKnown RBP11.99□□□□□ -0.49
HDLBP-209ENST00000422933 SULF1Q8IWU6 871 aa11.99□□□□□ -0.49
HDLBP-209ENST00000422933 VEZTQ9HBM0 779 aa11.99□□□□□ -0.49
HDLBP-209ENST00000422933 HELLSQ9NRZ9 838 aa11.99□□□□□ -0.49
HDLBP-209ENST00000422933 AATFQ9NY61 560 aaKnown RBP eCLIP11.99□□□□□ -0.49
HDLBP-209ENST00000422933 DAGLAQ9Y4D2 1042 aa11.99□□□□□ -0.49
HDLBP-209ENST00000422933 ECM29Q5VYK3 1845 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 GAKO14976 1311 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 WNT10BO00744 389 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 USP5P45974 858 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 PPP4CP60510 307 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 GRIK5Q16478 980 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 MCMDC2Q4G0Z9 681 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 KIAA1211Q6ZU35 1233 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 LDHDQ86WU2 507 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 TEX11Q8IYF3 940 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 HOOK2Q96ED9 719 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 PRMT6Q96LA8 375 aaPredicted RBP11.98□□□□□ -0.49
HDLBP-209ENST00000422933 NACAP1Q9BZK3 213 aa11.98□□□□□ -0.49
HDLBP-209ENST00000422933 PITPNM2Q9BZ72 1349 aa11.97□□□□□ -0.49
HDLBP-209ENST00000422933 CDC45O75419 566 aa11.97□□□□□ -0.49
HDLBP-209ENST00000422933 APPP05067 770 aa11.97□□□□□ -0.49
HDLBP-209ENST00000422933 GSPT1P15170 499 aaKnown RBP11.97□□□□□ -0.49
HDLBP-209ENST00000422933 FKBP1CQ5VVH2 108 aa11.97□□□□□ -0.49
HDLBP-209ENST00000422933 MIGA1Q8NAN2 632 aa11.97□□□□□ -0.49
HDLBP-209ENST00000422933 SMC1BQ8NDV3 1235 aa11.97□□□□□ -0.49
HDLBP-209ENST00000422933 TDRD3Q9H7E2 651 aaKnown RBP11.97□□□□□ -0.49
HDLBP-209ENST00000422933 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
HDLBP-209ENST00000422933 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
HDLBP-209ENST00000422933 NF2P35240 595 aa11.96□□□□□ -0.49
HDLBP-209ENST00000422933 NBPF9Q3BBW0 867 aa11.96□□□□□ -0.49
HDLBP-209ENST00000422933 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
HDLBP-209ENST00000422933 ZMYM1Q5SVZ6 1142 aa11.96□□□□□ -0.49
HDLBP-209ENST00000422933 ANGEL2Q5VTE6 544 aaKnown RBP11.96□□□□□ -0.49
HDLBP-209ENST00000422933 APOBEC3HQ6NTF7 200 aaKnown RBP11.96□□□□□ -0.49
HDLBP-209ENST00000422933 CWC27Q6UX04 472 aaKnown RBP11.96□□□□□ -0.49
HDLBP-209ENST00000422933 CDC37L1Q7L3B6 337 aa11.96□□□□□ -0.49
HDLBP-209ENST00000422933 TRPM4Q8TD43 1214 aa11.96□□□□□ -0.49
HDLBP-209ENST00000422933 GGA3Q9NZ52 723 aa11.96□□□□□ -0.49
HDLBP-209ENST00000422933 ZNF70Q9UC06 446 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-209ENST00000422933 PPP2R3BQ9Y5P8 575 aa11.96□□□□□ -0.49
HDLBP-209ENST00000422933 RAD50Q92878 1312 aa11.95□□□□□ -0.5
HDLBP-209ENST00000422933 TCRBV5S4A2TA0A5A2 114 aa11.95□□□□□ -0.5
HDLBP-209ENST00000422933 SHTN1A0MZ66 631 aa11.95□□□□□ -0.5
HDLBP-209ENST00000422933 CLRN2A0PK11 232 aa11.95□□□□□ -0.5
HDLBP-209ENST00000422933 MBD4O95243 580 aa11.95□□□□□ -0.5
HDLBP-209ENST00000422933 HSPA1AP0DMV8 641 aaKnown RBP11.95□□□□□ -0.5
HDLBP-209ENST00000422933 HSPA1BP0DMV9 641 aaKnown RBP11.95□□□□□ -0.5
HDLBP-209ENST00000422933 NMIQ13287 307 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-209ENST00000422933 CHADLQ6NUI6 762 aa11.95□□□□□ -0.5
HDLBP-209ENST00000422933 CDC42EP5Q6NZY7 148 aa11.95□□□□□ -0.5
HDLBP-209ENST00000422933 ZSCAN29Q8IWY8 852 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-209ENST00000422933 TRIM34Q9BYJ4 488 aa11.95□□□□□ -0.5
HDLBP-209ENST00000422933 SLC4A4Q9Y6R1 1079 aa11.95□□□□□ -0.5
HDLBP-209ENST00000422933 POLR2AP24928 1970 aaKnown RBP11.95□□□□□ -0.5
HDLBP-209ENST00000422933 RPAP1Q9BWH6 1393 aaPredicted RBP11.94□□□□□ -0.5
HDLBP-209ENST00000422933 TCP10L2B9ZVM9 353 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 GPAA1O43292 621 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 ENTPD3O75355 529 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 HLA-DOAP06340 250 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 CHMLP26374 656 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 DYNLL1P63167 89 aaKnown RBP11.94□□□□□ -0.5
HDLBP-209ENST00000422933 PICALMQ13492 652 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 SUPT20HL1Q3ZLR7 823 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 KRT26Q7Z3Y9 468 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 FAM83AQ86UY5 434 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 SKAP1Q86WV1 359 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 TNS4Q8IZW8 715 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 SH3RF3Q8TEJ3 882 aaPredicted RBP11.94□□□□□ -0.5
HDLBP-209ENST00000422933 TGFBRAP1Q8WUH2 860 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 ZBED3Q96IU2 234 aaPredicted RBP11.94□□□□□ -0.5
HDLBP-209ENST00000422933 IDI2Q9BXS1 227 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 PUS7LQ9H0K6 701 aaKnown RBP11.94□□□□□ -0.5
HDLBP-209ENST00000422933 DHX36Q9H2U1 1008 aaKnown RBP11.94□□□□□ -0.5
HDLBP-209ENST00000422933 ARMT1Q9H993 441 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 ATP8A2Q9NTI2 1148 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 ADAMTSL1Q8N6G6 1762 aa11.94□□□□□ -0.5
HDLBP-209ENST00000422933 CCDC171Q6TFL3 1326 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms