RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 RFX5P48382 616 aaPredicted RBP21.11■□□□□ 0.97
UPF3AP3-201ENST00000420996 KIF22Q14807 665 aa21.11■□□□□ 0.97
UPF3AP3-201ENST00000420996 LPIN2Q92539 896 aa21.11■□□□□ 0.97
UPF3AP3-201ENST00000420996 ZNF341Q9BYN7 854 aa21.11■□□□□ 0.97
UPF3AP3-201ENST00000420996 E9PSI1 815 aa21.1■□□□□ 0.97
UPF3AP3-201ENST00000420996 LACTBP83111 547 aaPredicted RBP21.1■□□□□ 0.97
UPF3AP3-201ENST00000420996 PPATQ06203 517 aa21.1■□□□□ 0.97
UPF3AP3-201ENST00000420996 HABP4Q5JVS0 413 aaKnown RBP21.1■□□□□ 0.97
UPF3AP3-201ENST00000420996 FAM151AQ8WW52 585 aa21.1■□□□□ 0.97
UPF3AP3-201ENST00000420996 GNRH1P01148 92 aa21.09■□□□□ 0.97
UPF3AP3-201ENST00000420996 SLC4A8Q2Y0W8 1093 aa21.09■□□□□ 0.97
UPF3AP3-201ENST00000420996 MIGA2Q7L4E1 593 aa21.09■□□□□ 0.97
UPF3AP3-201ENST00000420996 ARHGAP39Q9C0H5 1083 aa21.09■□□□□ 0.97
UPF3AP3-201ENST00000420996 AK9Q5TCS8 1911 aa21.09■□□□□ 0.97
UPF3AP3-201ENST00000420996 ZSWIM8A7E2V4 1837 aa21.08■□□□□ 0.97
UPF3AP3-201ENST00000420996 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.97
UPF3AP3-201ENST00000420996 ZNF112Q9UJU3 913 aa21.08■□□□□ 0.97
UPF3AP3-201ENST00000420996 INPP5BP32019 993 aa21.07■□□□□ 0.96
UPF3AP3-201ENST00000420996 PRMT2P55345 433 aa21.07■□□□□ 0.96
UPF3AP3-201ENST00000420996 CDC42EP5Q6NZY7 148 aa21.07■□□□□ 0.96
UPF3AP3-201ENST00000420996 ATG9AQ7Z3C6 839 aa21.07■□□□□ 0.96
UPF3AP3-201ENST00000420996 DAGLAQ9Y4D2 1042 aa21.07■□□□□ 0.96
UPF3AP3-201ENST00000420996 ALDH1L2Q3SY69 923 aa21.06■□□□□ 0.96
UPF3AP3-201ENST00000420996 C17orf99Q6UX52 265 aa21.06■□□□□ 0.96
UPF3AP3-201ENST00000420996 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.06■□□□□ 0.96
UPF3AP3-201ENST00000420996 FBXO3Q9UK99 471 aa21.06■□□□□ 0.96
UPF3AP3-201ENST00000420996 SLFN5Q08AF3 891 aa21.05■□□□□ 0.96
UPF3AP3-201ENST00000420996 TCP10Q12799 353 aa21.05■□□□□ 0.96
UPF3AP3-201ENST00000420996 DIXDC1Q155Q3 683 aa21.05■□□□□ 0.96
UPF3AP3-201ENST00000420996 ANKRD23Q86SG2 305 aa21.05■□□□□ 0.96
UPF3AP3-201ENST00000420996 SH3TC2Q8TF17 1288 aa21.05■□□□□ 0.96
UPF3AP3-201ENST00000420996 GNL3LQ9NVN8 582 aaKnown RBP21.05■□□□□ 0.96
UPF3AP3-201ENST00000420996 KCNH4Q9UQ05 1017 aa21.05■□□□□ 0.96
UPF3AP3-201ENST00000420996 BRCA2P51587 3418 aa21.04■□□□□ 0.96
UPF3AP3-201ENST00000420996 CIAO1O76071 339 aa21.04■□□□□ 0.96
UPF3AP3-201ENST00000420996 PRDX5P30044 214 aa21.04■□□□□ 0.96
UPF3AP3-201ENST00000420996 CEP126Q9P2H0 1117 aa21.04■□□□□ 0.96
UPF3AP3-201ENST00000420996 PDHXO00330 501 aa21.03■□□□□ 0.96
UPF3AP3-201ENST00000420996 MYCP01106 439 aaPredicted RBP21.03■□□□□ 0.96
UPF3AP3-201ENST00000420996 LDHBP07195 334 aaKnown RBP21.03■□□□□ 0.96
UPF3AP3-201ENST00000420996 NFIAQ12857 509 aa21.03■□□□□ 0.96
UPF3AP3-201ENST00000420996 ATP2B3Q16720 1220 aa21.03■□□□□ 0.96
UPF3AP3-201ENST00000420996 NOL9Q5SY16 702 aaKnown RBP21.03■□□□□ 0.96
UPF3AP3-201ENST00000420996 SIL1Q9H173 461 aa21.03■□□□□ 0.96
UPF3AP3-201ENST00000420996 FAM198AQ9UFP1 575 aa21.03■□□□□ 0.96
UPF3AP3-201ENST00000420996 CPA4Q9UI42 421 aa21.03■□□□□ 0.96
UPF3AP3-201ENST00000420996 SALL1Q9NSC2 1324 aa21.03■□□□□ 0.96
UPF3AP3-201ENST00000420996 UBTFL1P0CB47 393 aaPredicted RBP21.02■□□□□ 0.96
UPF3AP3-201ENST00000420996 SMC4Q9NTJ3 1288 aa21.02■□□□□ 0.96
UPF3AP3-201ENST00000420996 USP40Q9NVE5 1235 aa21.02■□□□□ 0.96
UPF3AP3-201ENST00000420996 DENND2AQ9ULE3 1009 aa21.02■□□□□ 0.96
UPF3AP3-201ENST00000420996 ADGRA2Q96PE1 1338 aa21.02■□□□□ 0.95
UPF3AP3-201ENST00000420996 SEMA3EO15041 775 aa21.01■□□□□ 0.95
UPF3AP3-201ENST00000420996 HOXD10P28358 340 aa21.01■□□□□ 0.95
UPF3AP3-201ENST00000420996 CTGFP29279 349 aa21.01■□□□□ 0.95
UPF3AP3-201ENST00000420996 PSMC4P43686 418 aa21.01■□□□□ 0.95
UPF3AP3-201ENST00000420996 SRRDQ9UH36 339 aa21.01■□□□□ 0.95
UPF3AP3-201ENST00000420996 MYH2Q9UKX2 1941 aa21■□□□□ 0.95
UPF3AP3-201ENST00000420996 CXCL11O14625 94 aa21■□□□□ 0.95
UPF3AP3-201ENST00000420996 ZBTB22O15209 634 aa21■□□□□ 0.95
UPF3AP3-201ENST00000420996 MOGSQ13724 837 aa21■□□□□ 0.95
UPF3AP3-201ENST00000420996 TRIM47Q96LD4 638 aa21■□□□□ 0.95
UPF3AP3-201ENST00000420996 HDAC5Q9UQL6 1122 aa21■□□□□ 0.95
UPF3AP3-201ENST00000420996 ECM2O94769 699 aaPredicted RBP20.99■□□□□ 0.95
UPF3AP3-201ENST00000420996 IL15P40933 162 aaPredicted RBP20.99■□□□□ 0.95
UPF3AP3-201ENST00000420996 PHKA1P46020 1223 aa20.99■□□□□ 0.95
UPF3AP3-201ENST00000420996 ZFPM1Q8IX07 1006 aa20.99■□□□□ 0.95
UPF3AP3-201ENST00000420996 DOCK2Q92608 1830 aa20.99■□□□□ 0.95
UPF3AP3-201ENST00000420996 FMNL1O95466 1100 aaPredicted RBP20.98■□□□□ 0.95
UPF3AP3-201ENST00000420996 OSBPP22059 807 aa20.98■□□□□ 0.95
UPF3AP3-201ENST00000420996 ZGPATQ8N5A5 531 aaKnown RBP20.98■□□□□ 0.95
UPF3AP3-201ENST00000420996 IDI2Q9BXS1 227 aa20.98■□□□□ 0.95
UPF3AP3-201ENST00000420996 PHF20L1A8MW92 1017 aa20.97■□□□□ 0.95
UPF3AP3-201ENST00000420996 ENTPD3O75355 529 aa20.97■□□□□ 0.95
UPF3AP3-201ENST00000420996 GRK4P32298 578 aa20.97■□□□□ 0.95
UPF3AP3-201ENST00000420996 MTFR1Q15390 333 aa20.97■□□□□ 0.95
UPF3AP3-201ENST00000420996 GPAT2Q6NUI2 795 aa20.97■□□□□ 0.95
UPF3AP3-201ENST00000420996 RAET1EQ8TD07 263 aa20.97■□□□□ 0.95
UPF3AP3-201ENST00000420996 CDCA7LQ96GN5 454 aa20.97■□□□□ 0.95
UPF3AP3-201ENST00000420996 PARK7Q99497 189 aaKnown RBP20.97■□□□□ 0.95
UPF3AP3-201ENST00000420996 ATRNL1Q5VV63 1379 aa20.97■□□□□ 0.95
UPF3AP3-201ENST00000420996 MGAMO43451 1857 aa20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 BCRP11274 1271 aa20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 RGS3P49796 1198 aa20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 FXR1P51114 621 aaKnown RBP eCLIP20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 CCDC102BQ68D86 513 aa20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 TRMT2AQ8IZ69 625 aaKnown RBP20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 COPRSQ9NQ92 184 aa20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 PA2G4Q9UQ80 394 aaKnown RBP20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 COLQQ9Y215 455 aaPredicted RBP20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 LRRFIP2Q9Y608 721 aaKnown RBP20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 GAKO14976 1311 aa20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 MYPNQ86TC9 1320 aa20.96■□□□□ 0.95
UPF3AP3-201ENST00000420996 CT47B1P0C2W7 299 aaPredicted RBP20.95■□□□□ 0.94
UPF3AP3-201ENST00000420996 MAP3K10Q02779 954 aa20.95■□□□□ 0.94
UPF3AP3-201ENST00000420996 FASTKD5Q7L8L6 764 aaKnown RBP20.95■□□□□ 0.94
UPF3AP3-201ENST00000420996 SCYL3Q8IZE3 742 aa20.95■□□□□ 0.94
UPF3AP3-201ENST00000420996 NKX2-3Q8TAU0 364 aa20.95■□□□□ 0.94
UPF3AP3-201ENST00000420996 API5Q9BZZ5 524 aaKnown RBP20.95■□□□□ 0.94
UPF3AP3-201ENST00000420996 NOB1Q9ULX3 412 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms