RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 AOX1Q06278 1338 aa28.06■■■□□ 2.08
SMARCB1-205ENST00000417137 GPR75-ASB3A0A0A6YYF3 556 aa28.05■■■□□ 2.08
SMARCB1-205ENST00000417137 MX1P20591 662 aa28.05■■■□□ 2.08
SMARCB1-205ENST00000417137 NUCB1Q02818 461 aa28.05■■■□□ 2.08
SMARCB1-205ENST00000417137 CDC42EP5Q6NZY7 148 aa28.05■■■□□ 2.08
SMARCB1-205ENST00000417137 DLK2Q6UY11 383 aa28.05■■■□□ 2.08
SMARCB1-205ENST00000417137 CHD1LQ86WJ1 897 aa28.05■■■□□ 2.08
SMARCB1-205ENST00000417137 TCP10L2B9ZVM9 353 aa28.04■■■□□ 2.08
SMARCB1-205ENST00000417137 BAG3O95817 575 aa28.04■■■□□ 2.08
SMARCB1-205ENST00000417137 MAP4K4O95819 1239 aaPredicted RBP28.04■■■□□ 2.08
SMARCB1-205ENST00000417137 BTDP43251 543 aa28.04■■■□□ 2.08
SMARCB1-205ENST00000417137 RASA3Q14644 834 aa28.04■■■□□ 2.08
SMARCB1-205ENST00000417137 ZNF384Q8TF68 577 aa28.04■■■□□ 2.08
SMARCB1-205ENST00000417137 LNPKQ9C0E8 428 aa28.04■■■□□ 2.08
SMARCB1-205ENST00000417137 AKAP11Q9UKA4 1901 aa28.04■■■□□ 2.08
SMARCB1-205ENST00000417137 GLRX3O76003 335 aaKnown RBP28.03■■■□□ 2.08
SMARCB1-205ENST00000417137 C2orf69Q8N8R5 385 aa28.03■■■□□ 2.08
SMARCB1-205ENST00000417137 CYP7A1P22680 504 aa28.02■■■□□ 2.08
SMARCB1-205ENST00000417137 SUPT20HL1Q3ZLR7 823 aa28.02■■■□□ 2.08
SMARCB1-205ENST00000417137 COL13A1Q5TAT6 717 aaPredicted RBP28.02■■■□□ 2.08
SMARCB1-205ENST00000417137 PRAMEF18Q5VWM3 479 aa28.02■■■□□ 2.08
SMARCB1-205ENST00000417137 FAM83AQ86UY5 434 aa28.02■■■□□ 2.08
SMARCB1-205ENST00000417137 ABT1Q9ULW3 272 aaKnown RBP28.02■■■□□ 2.08
SMARCB1-205ENST00000417137 CACNB3P54284 484 aa28.01■■■□□ 2.07
SMARCB1-205ENST00000417137 MAGEB6Q8N7X4 407 aa28.01■■■□□ 2.07
SMARCB1-205ENST00000417137 OTUD7AQ8TE49 926 aaPredicted RBP28.01■■■□□ 2.07
SMARCB1-205ENST00000417137 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.01■■■□□ 2.07
SMARCB1-205ENST00000417137 GBA2Q9HCG7 927 aaPredicted RBP28.01■■■□□ 2.07
SMARCB1-205ENST00000417137 POLR2AP24928 1970 aaKnown RBP28■■■□□ 2.07
SMARCB1-205ENST00000417137 PLCG2P16885 1265 aa28■■■□□ 2.07
SMARCB1-205ENST00000417137 FKBP1BP68106 108 aa28■■■□□ 2.07
SMARCB1-205ENST00000417137 TSHZ3Q63HK5 1081 aa28■■■□□ 2.07
SMARCB1-205ENST00000417137 STAP2Q9UGK3 403 aa28■■■□□ 2.07
SMARCB1-205ENST00000417137 SLC9C2Q5TAH2 1124 aa27.99■■■□□ 2.07
SMARCB1-205ENST00000417137 CERS3Q8IU89 383 aa27.99■■■□□ 2.07
SMARCB1-205ENST00000417137 EDC3Q96F86 508 aaKnown RBP27.99■■■□□ 2.07
SMARCB1-205ENST00000417137 PPP4CP60510 307 aa27.98■■■□□ 2.07
SMARCB1-205ENST00000417137 ZSCAN25Q6NSZ9 544 aa27.98■■■□□ 2.07
SMARCB1-205ENST00000417137 IDI2Q9BXS1 227 aa27.98■■■□□ 2.07
SMARCB1-205ENST00000417137 TLL2Q9Y6L7 1015 aa27.98■■■□□ 2.07
SMARCB1-205ENST00000417137 SALL3Q9BXA9 1300 aa27.97■■■□□ 2.07
SMARCB1-205ENST00000417137 PDE1AP54750 535 aa27.97■■■□□ 2.07
SMARCB1-205ENST00000417137 PI4K2BQ8TCG2 481 aa27.97■■■□□ 2.07
SMARCB1-205ENST00000417137 FAM151AQ8WW52 585 aa27.97■■■□□ 2.07
SMARCB1-205ENST00000417137 HOOK2Q96ED9 719 aa27.97■■■□□ 2.07
SMARCB1-205ENST00000417137 ECM29Q5VYK3 1845 aa27.97■■■□□ 2.07
SMARCB1-205ENST00000417137 PDE6AP16499 860 aa27.96■■■□□ 2.07
SMARCB1-205ENST00000417137 RHBDL3P58872 404 aa27.96■■■□□ 2.07
SMARCB1-205ENST00000417137 TTLL12Q14166 644 aaPredicted RBP27.96■■■□□ 2.07
SMARCB1-205ENST00000417137 SAPCD2Q86UD0 394 aa27.96■■■□□ 2.07
SMARCB1-205ENST00000417137 TMEM39BQ9GZU3 492 aa27.96■■■□□ 2.07
SMARCB1-205ENST00000417137 AATFQ9NY61 560 aaKnown RBP eCLIP27.96■■■□□ 2.07
SMARCB1-205ENST00000417137 MYH2Q9UKX2 1941 aa27.96■■■□□ 2.07
SMARCB1-205ENST00000417137 PPP1R12BO60237 982 aaPredicted RBP27.95■■■□□ 2.06
SMARCB1-205ENST00000417137 ENTPD3O75355 529 aa27.95■■■□□ 2.06
SMARCB1-205ENST00000417137 DEFB115Q30KQ5 88 aa27.95■■■□□ 2.06
SMARCB1-205ENST00000417137 LRRFIP1Q32MZ4 808 aaKnown RBP27.95■■■□□ 2.06
SMARCB1-205ENST00000417137 NBPF12Q5TAG4 269 aaPredicted RBP27.95■■■□□ 2.06
SMARCB1-205ENST00000417137 ARMC9Q7Z3E5 817 aa27.95■■■□□ 2.06
SMARCB1-205ENST00000417137 NPM3O75607 178 aaKnown RBP27.94■■■□□ 2.06
SMARCB1-205ENST00000417137 TCP10Q12799 353 aa27.94■■■□□ 2.06
SMARCB1-205ENST00000417137 NFIAQ12857 509 aa27.94■■■□□ 2.06
SMARCB1-205ENST00000417137 ADGRA1Q86SQ6 560 aa27.94■■■□□ 2.06
SMARCB1-205ENST00000417137 TEX11Q8IYF3 940 aa27.94■■■□□ 2.06
SMARCB1-205ENST00000417137 TNS4Q8IZW8 715 aa27.94■■■□□ 2.06
SMARCB1-205ENST00000417137 KBTBD3Q8NAB2 608 aa27.94■■■□□ 2.06
SMARCB1-205ENST00000417137 CNTNAP1P78357 1384 aa27.94■■■□□ 2.06
SMARCB1-205ENST00000417137 TRPM7Q96QT4 1865 aa27.93■■■□□ 2.06
SMARCB1-205ENST00000417137 WDHD1O75717 1129 aaPredicted RBP27.93■■■□□ 2.06
SMARCB1-205ENST00000417137 RGS3P49796 1198 aa27.93■■■□□ 2.06
SMARCB1-205ENST00000417137 HUNKP57058 714 aa27.93■■■□□ 2.06
SMARCB1-205ENST00000417137 HHIPL1Q96JK4 782 aa27.93■■■□□ 2.06
SMARCB1-205ENST00000417137 TEPSINQ96N21 525 aa27.93■■■□□ 2.06
SMARCB1-205ENST00000417137 FAM198AQ9UFP1 575 aa27.93■■■□□ 2.06
SMARCB1-205ENST00000417137 ZNF532Q9HCE3 1301 aa27.92■■■□□ 2.06
SMARCB1-205ENST00000417137 RASSF10A6NK89 507 aa27.92■■■□□ 2.06
SMARCB1-205ENST00000417137 ADD2P35612 726 aa27.92■■■□□ 2.06
SMARCB1-205ENST00000417137 SH3RF3Q8TEJ3 882 aaPredicted RBP27.92■■■□□ 2.06
SMARCB1-205ENST00000417137 PICALMQ13492 652 aa27.91■■■□□ 2.06
SMARCB1-205ENST00000417137 UBE3CQ15386 1083 aa27.91■■■□□ 2.06
SMARCB1-205ENST00000417137 PLEKHM2Q8IWE5 1019 aa27.91■■■□□ 2.06
SMARCB1-205ENST00000417137 MIGA1Q8NAN2 632 aa27.91■■■□□ 2.06
SMARCB1-205ENST00000417137 RPAP1Q9BWH6 1393 aaPredicted RBP27.9■■■□□ 2.06
SMARCB1-205ENST00000417137 MAGEB6P1A0A0J9YX57 407 aa27.9■■■□□ 2.06
SMARCB1-205ENST00000417137 ZFYP08048 801 aaPredicted RBP27.9■■■□□ 2.06
SMARCB1-205ENST00000417137 PRKG1Q13976 671 aa27.9■■■□□ 2.06
SMARCB1-205ENST00000417137 CENPQQ7L2Z9 268 aaPredicted RBP27.9■■■□□ 2.06
SMARCB1-205ENST00000417137 ZSCAN29Q8IWY8 852 aaPredicted RBP27.9■■■□□ 2.06
SMARCB1-205ENST00000417137 OSBPL3Q9H4L5 887 aa27.9■■■□□ 2.06
SMARCB1-205ENST00000417137 MKRN1Q9UHC7 482 aaKnown RBP27.9■■■□□ 2.06
SMARCB1-205ENST00000417137 PCNTO95613 3336 aa27.89■■■□□ 2.06
SMARCB1-205ENST00000417137 MAST2Q6P0Q8 1798 aa27.89■■■□□ 2.06
SMARCB1-205ENST00000417137 TCRBV5S4A2TA0A5A2 114 aa27.89■■■□□ 2.06
SMARCB1-205ENST00000417137 HSPA1AP0DMV8 641 aaKnown RBP27.89■■■□□ 2.06
SMARCB1-205ENST00000417137 HSPA1BP0DMV9 641 aaKnown RBP27.89■■■□□ 2.06
SMARCB1-205ENST00000417137 DYNLL1P63167 89 aaKnown RBP27.89■■■□□ 2.06
SMARCB1-205ENST00000417137 ERICH6BQ5W0A0 696 aa27.89■■■□□ 2.06
SMARCB1-205ENST00000417137 PAXIP1Q6ZW49 1069 aaPredicted RBP27.89■■■□□ 2.06
SMARCB1-205ENST00000417137 CCDC136Q96JN2 1154 aa27.89■■■□□ 2.06
SMARCB1-205ENST00000417137 ANGEL1Q9UNK9 670 aaKnown RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms