RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 CYP46A1Q9Y6A2 500 aa12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 SNED1Q8TER0 1413 aa12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 F8W031 263 aaPredicted RBP12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 HSP90AA1P07900 732 aaKnown RBP12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 PLCG2P16885 1265 aa12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 CASTP20810 708 aaKnown RBP12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 IARSP41252 1262 aaKnown RBP12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 MCM2P49736 904 aa12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 FKBP1AP62942 108 aaKnown RBP12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 BLOC1S2Q6QNY1 142 aa12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 ADGRA1Q86SQ6 560 aa12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 JDP2Q8WYK2 163 aa12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 KCNB2Q92953 911 aa12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 TBC1D2Q9BYX2 928 aa12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 UPF3BQ9BZI7 483 aaKnown RBP12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 TM6SF1Q9BZW5 370 aa12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 ZNF277Q9NRM2 450 aaPredicted RBP12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 TTF2Q9UNY4 1162 aaKnown RBP12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 MROH7-TTC4A0A0A0MT08 1334 aa12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 ZMYM6O95789 1325 aa12.09□□□□□ -0.47
DEPDC4-203ENST00000416321 HAX1O00165 279 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 FGAP02671 866 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 CYP21A2P08686 494 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 HMGB1P09429 215 aaKnown RBP12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 USP5P45974 858 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 DYNLL1P63167 89 aaKnown RBP12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 TRDNQ13061 729 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 DIXDC1Q155Q3 683 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 ALX1Q15699 326 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 TSGA10IPQ3SY00 556 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 AMOTL1Q8IY63 956 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 IFNL3Q8IZI9 196 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 NLGN2Q8NFZ4 835 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 SP7Q8TDD2 431 aaPredicted RBP12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 NEK1Q96PY6 1258 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 RIOK1Q9BRS2 568 aaKnown RBP12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 FHDC1Q9C0D6 1143 aaPredicted RBP12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 MYO3BQ8WXR4 1341 aa12.08□□□□□ -0.48
DEPDC4-203ENST00000416321 CHD4Q14839 1912 aa12.07□□□□□ -0.48
DEPDC4-203ENST00000416321 MYH2Q9UKX2 1941 aa12.07□□□□□ -0.48
DEPDC4-203ENST00000416321 K7ELQ4 463 aaPredicted RBP12.07□□□□□ -0.48
DEPDC4-203ENST00000416321 PRKAB2O43741 272 aa12.07□□□□□ -0.48
DEPDC4-203ENST00000416321 BTDP43251 543 aa12.07□□□□□ -0.48
DEPDC4-203ENST00000416321 HAND2P61296 217 aa12.07□□□□□ -0.48
DEPDC4-203ENST00000416321 FGD1P98174 961 aa12.07□□□□□ -0.48
DEPDC4-203ENST00000416321 RALYLQ86SE5 291 aaKnown RBP12.07□□□□□ -0.48
DEPDC4-203ENST00000416321 TEKT1Q969V4 418 aa12.07□□□□□ -0.48
DEPDC4-203ENST00000416321 FER1L6Q2WGJ9 1857 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 GSG1L2A8MUP6 293 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 GRIK5Q16478 980 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 ADCK5Q3MIX3 580 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 DACT2Q5SW24 774 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 GIMAP6Q6P9H5 292 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 RUFY3Q7L099 469 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 ZNF384Q8TF68 577 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 SDR42E1Q8WUS8 393 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 ZSWIM6Q9HCJ5 1215 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 ATP8A2Q9NTI2 1148 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 PDRG1Q9NUG6 133 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 ZNRF3Q9ULT6 936 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 ARFGEF1Q9Y6D6 1849 aa12.06□□□□□ -0.48
DEPDC4-203ENST00000416321 LAMA4Q16363 1823 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 GPR75-ASB3A0A0A6YYF3 556 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 E7EWF7 191 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 FOXP2O15409 715 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 SLC3A2P08195 630 aaKnown RBP12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 RPS6KB1P23443 525 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 SLC4A3P48751 1232 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 RBM5P52756 815 aaKnown RBP eCLIP12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 PPP4CP60510 307 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 ANKRD1Q15327 319 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 KIAA0825Q8IV33 1275 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 TEX11Q8IYF3 940 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 CERS5Q8N5B7 392 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 NCOA7Q8NI08 942 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 FAM163AQ96GL9 167 aaPredicted RBP12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 MXD3Q9BW11 206 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 RNF41Q9H4P4 317 aaPredicted RBP12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 EPB41L4AQ9HCS5 686 aaPredicted RBP12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 ARPP21Q9UBL0 812 aaPredicted RBP12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 HDAC9Q9UKV0 1011 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 GAKO14976 1311 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 LTBP3Q9NS15 1303 aa12.05□□□□□ -0.48
DEPDC4-203ENST00000416321 YDJCA8MPS7 323 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 MINDY4BA8MYZ0 360 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 NFKBIEO00221 500 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 RAD17O75943 681 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 CRKP46108 304 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 SCNN1DP51172 638 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 HDLBPQ00341 1268 aaKnown RBP12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 PPARAQ07869 468 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 HHIPL2Q6UWX4 724 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 NOL8Q76FK4 1167 aaKnown RBP12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 SH3RF3Q8TEJ3 882 aaPredicted RBP12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 CNNM2Q9H8M5 875 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 KCNQ5Q9NR82 932 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 TOMM22Q9NS69 142 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 DAGLAQ9Y4D2 1042 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 SCN9AQ15858 1988 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms