RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CCDC86Q9H6F5 360 aaKnown RBP6.53□□□□□ -1.36
HMGB3P23-201ENST00000414981 SAMM50Q9Y512 469 aa6.53□□□□□ -1.36
HMGB3P23-201ENST00000414981 FAM95CA0A1B0GW59 222 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 ZNF862O60290 1169 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 LIG1P18858 919 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 CCDC27Q2M243 656 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 KIF4BQ2VIQ3 1234 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 AKAP4Q5JQC9 854 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 SCARA3Q6AZY7 606 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 CDPF1Q6NVV7 123 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 PAOXQ6QHF9 649 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 NPAS4Q8IUM7 802 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 SULF2Q8IWU5 870 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 Q8N3U1 123 aa6.52□□□□□ -1.37
HMGB3P23-201ENST00000414981 ENC1O14682 589 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 BMP6P22004 513 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 EIF4BP23588 611 aaKnown RBP6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 RXRBP28702 533 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 ASPAP45381 313 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 ZNF252P-AS1Q0IIN9 211 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 ARTNQ5T4W7 220 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 DYMQ7RTS9 669 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 FBLIM1Q8WUP2 373 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 DUSP9Q99956 384 aaKnown RBP6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 CACNA2D2Q9NY47 1150 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 CRIM1Q9NZV1 1036 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 PPP1R9AQ9ULJ8 1098 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 ACTL7BQ9Y614 415 aa6.51□□□□□ -1.37
HMGB3P23-201ENST00000414981 USP17L7P0C7H9 530 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 MAP7Q14244 749 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 LRRC14Q15048 493 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 NFKBIBQ15653 356 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 TPTE2Q6XPS3 522 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 SV2BQ7L1I2 683 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 ZDHHC13Q8IUH4 622 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 GIMAP7Q8NHV1 300 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 STK35Q8TDR2 534 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 KCNB2Q92953 911 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 WDR89Q96FK6 387 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 ZC3H12CQ9C0D7 883 aaKnown RBP6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 ACSS3Q9H6R3 686 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 CYP8B1Q9UNU6 501 aa6.5□□□□□ -1.37
HMGB3P23-201ENST00000414981 TMPRSS2O15393 492 aa6.49□□□□□ -1.37
HMGB3P23-201ENST00000414981 DAB2P98082 770 aa6.49□□□□□ -1.37
HMGB3P23-201ENST00000414981 ID3Q02535 119 aa6.49□□□□□ -1.37
HMGB3P23-201ENST00000414981 LRP8Q14114 963 aa6.49□□□□□ -1.37
HMGB3P23-201ENST00000414981 FBXO33Q7Z6M2 555 aa6.49□□□□□ -1.37
HMGB3P23-201ENST00000414981 ATXN3LQ9H3M9 355 aa6.49□□□□□ -1.37
HMGB3P23-201ENST00000414981 FAM105AQ9NUU6 356 aa6.49□□□□□ -1.37
HMGB3P23-201ENST00000414981 PARP2Q9UGN5 583 aa6.49□□□□□ -1.37
HMGB3P23-201ENST00000414981 PCDHGC5Q9Y5F6 944 aa6.49□□□□□ -1.37
HMGB3P23-201ENST00000414981 PRR19A6NJB7 356 aa6.48□□□□□ -1.37
HMGB3P23-201ENST00000414981 HYAL3O43820 417 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P23-201ENST00000414981 NFICP08651 508 aa6.48□□□□□ -1.37
HMGB3P23-201ENST00000414981 INTS5Q6P9B9 1019 aaKnown RBP6.48□□□□□ -1.37
HMGB3P23-201ENST00000414981 SHKBP1Q8TBC3 707 aa6.48□□□□□ -1.37
HMGB3P23-201ENST00000414981 FANCD2OSQ96PS1 177 aa6.48□□□□□ -1.37
HMGB3P23-201ENST00000414981 ZFP64Q9NPA5 681 aa6.48□□□□□ -1.37
HMGB3P23-201ENST00000414981 DISC1Q9NRI5 854 aa6.48□□□□□ -1.37
HMGB3P23-201ENST00000414981 AP4E1Q9UPM8 1137 aa6.48□□□□□ -1.37
HMGB3P23-201ENST00000414981 SCO2A0A1W2PP80 73 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 COBLO75128 1261 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 PAGE1O75459 146 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 TRIM37O94972 964 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 XPCQ01831 940 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 CPSF6Q16630 551 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 ZC3H12AQ5D1E8 599 aaKnown RBP6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 MAP1SQ66K74 1059 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 SEZ6L2Q6UXD5 910 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 TMC4Q7Z404 712 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 GRIN3AQ8TCU5 1115 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 MFSD14AQ96MC6 490 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 SEMA6CQ9H3T2 930 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 CBX8Q9HC52 389 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 ATG3Q9NT62 314 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 RNF19AQ9NV58 838 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 PRKAG2Q9UGJ0 569 aa6.47□□□□□ -1.37
HMGB3P23-201ENST00000414981 ZBTB7CA1YPR0 619 aa6.46□□□□□ -1.38
HMGB3P23-201ENST00000414981 WDR64B1ANS9 1081 aa6.46□□□□□ -1.38
HMGB3P23-201ENST00000414981 GRIK1P39086 918 aa6.46□□□□□ -1.38
HMGB3P23-201ENST00000414981 ERVK-24P63145 666 aa6.46□□□□□ -1.38
HMGB3P23-201ENST00000414981 ZAR1Q86SH2 424 aa6.46□□□□□ -1.38
HMGB3P23-201ENST00000414981 HOMEZQ8IX15 550 aa6.46□□□□□ -1.38
HMGB3P23-201ENST00000414981 GPBAR1Q8TDU6 330 aa6.46□□□□□ -1.38
HMGB3P23-201ENST00000414981 FBXO24O75426 580 aa6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 TGFB1P01137 390 aa6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 F13BP05160 661 aa6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 RAB6AP20340 208 aa6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 ITGAEP38570 1179 aa6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 CD97P48960 835 aa6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 PSMD2Q13200 908 aa6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 LLGL2Q6P1M3 1020 aa6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 GATA6Q92908 595 aa6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 METTL22Q9BUU2 404 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 C1GALT1Q9NS00 363 aa6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 PCOLCE2Q9UKZ9 415 aa6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 TTF2Q9UNY4 1162 aaKnown RBP6.45□□□□□ -1.38
HMGB3P23-201ENST00000414981 ADMP35318 185 aa6.44□□□□□ -1.38
HMGB3P23-201ENST00000414981 RPS26P62854 115 aaKnown RBP6.44□□□□□ -1.38
HMGB3P23-201ENST00000414981 CYP27A1Q02318 531 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms