RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 HHIPL2Q6UWX4 724 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 MOB2Q70IA6 237 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 ADGRA1Q86SQ6 560 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 SMC5Q8IY18 1101 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 PIP4P2Q8N4L2 257 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 NSUN4Q96CB9 384 aaKnown RBP9.42□□□□□ -0.9
CPSF4-202ENST00000412686 GCC1Q96CN9 775 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 LNPKQ9C0E8 428 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 LRP2BPQ9P2M1 347 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 FZD1Q9UP38 647 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 SSC5DA1L4H1 1573 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 MROH7-TTC4A0A0A0MT08 1334 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 SALL3Q9BXA9 1300 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 TMEM88BA6NKF7 163 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 GOLIM4O00461 696 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 MYO1BO43795 1136 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 IDH1O75874 414 aaKnown RBP9.41□□□□□ -0.9
CPSF4-202ENST00000412686 ATP5JP18859 108 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 BTDP43251 543 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 NFIAQ12857 509 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 RASA3Q14644 834 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 SPTY2D1Q68D10 685 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-202ENST00000412686 CDC42EP5Q6NZY7 148 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 APOBEC3FQ8IUX4 373 aaKnown RBP9.41□□□□□ -0.9
CPSF4-202ENST00000412686 MRIQ9BWK5 157 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 DEFB129Q9H1M3 183 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 RWDD1Q9H446 243 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-202ENST00000412686 ECHDC1Q9NTX5 307 aa9.41□□□□□ -0.9
CPSF4-202ENST00000412686 CNTNAP1P78357 1384 aa9.4□□□□□ -0.9
CPSF4-202ENST00000412686 MAP4K4O95819 1239 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-202ENST00000412686 PRKG1Q13976 671 aa9.4□□□□□ -0.9
CPSF4-202ENST00000412686 NBPF12Q5TAG4 269 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-202ENST00000412686 NAA16Q6N069 864 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-202ENST00000412686 MAGEB6Q8N7X4 407 aa9.4□□□□□ -0.9
CPSF4-202ENST00000412686 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.4□□□□□ -0.9
CPSF4-202ENST00000412686 HAUS7Q99871 368 aa9.4□□□□□ -0.9
CPSF4-202ENST00000412686 TMEM39BQ9GZU3 492 aa9.4□□□□□ -0.9
CPSF4-202ENST00000412686 CREBZFQ9NS37 354 aa9.4□□□□□ -0.9
CPSF4-202ENST00000412686 USP40Q9NVE5 1235 aa9.4□□□□□ -0.9
CPSF4-202ENST00000412686 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.9
CPSF4-202ENST00000412686 ABT1Q9ULW3 272 aaKnown RBP9.4□□□□□ -0.9
CPSF4-202ENST00000412686 CDK5RAP2Q96SN8 1893 aa9.4□□□□□ -0.91
CPSF4-202ENST00000412686 RFX7Q2KHR2 1363 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 MYH7P12883 1935 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 GPR75-ASB3A0A0A6YYF3 556 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 SLURP2P0DP57 97 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 MX1P20591 662 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 CYP7A1P22680 504 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 RHBDL3P58872 404 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 TCP10Q12799 353 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 ZFPM1Q8IX07 1006 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 MIGA1Q8NAN2 632 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 PI4K2BQ8TCG2 481 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 FAM163AQ96GL9 167 aaPredicted RBP9.39□□□□□ -0.91
CPSF4-202ENST00000412686 TEPSINQ96N21 525 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 PAG1Q9NWQ8 432 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 AATFQ9NY61 560 aaKnown RBP eCLIP9.39□□□□□ -0.91
CPSF4-202ENST00000412686 FAM198AQ9UFP1 575 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 PAPPA2Q9BXP8 1791 aa9.39□□□□□ -0.91
CPSF4-202ENST00000412686 OTOFQ9HC10 1997 aa9.38□□□□□ -0.91
CPSF4-202ENST00000412686 WDHD1O75717 1129 aaPredicted RBP9.38□□□□□ -0.91
CPSF4-202ENST00000412686 CENPBP07199 599 aaPredicted RBP9.38□□□□□ -0.91
CPSF4-202ENST00000412686 DYNLL1P63167 89 aaKnown RBP9.38□□□□□ -0.91
CPSF4-202ENST00000412686 NUCB1Q02818 461 aa9.38□□□□□ -0.91
CPSF4-202ENST00000412686 PICALMQ13492 652 aa9.38□□□□□ -0.91
CPSF4-202ENST00000412686 POTEHQ6S545 545 aa9.38□□□□□ -0.91
CPSF4-202ENST00000412686 SAPCD2Q86UD0 394 aa9.38□□□□□ -0.91
CPSF4-202ENST00000412686 CHD1LQ86WJ1 897 aa9.38□□□□□ -0.91
CPSF4-202ENST00000412686 DNAJC5GQ8N7S2 189 aa9.38□□□□□ -0.91
CPSF4-202ENST00000412686 SH3RF3Q8TEJ3 882 aaPredicted RBP9.38□□□□□ -0.91
CPSF4-202ENST00000412686 GBA2Q9HCG7 927 aaPredicted RBP9.38□□□□□ -0.91
CPSF4-202ENST00000412686 DDX4Q9NQI0 724 aaKnown RBP9.38□□□□□ -0.91
CPSF4-202ENST00000412686 TMOD2Q9NZR1 351 aa9.38□□□□□ -0.91
CPSF4-202ENST00000412686 ZBTB47Q9UFB7 747 aaPredicted RBP9.38□□□□□ -0.91
CPSF4-202ENST00000412686 TLL2Q9Y6L7 1015 aa9.38□□□□□ -0.91
CPSF4-202ENST00000412686 FOCADQ5VW36 1801 aa9.38□□□□□ -0.91
CPSF4-202ENST00000412686 TTC41PQ6P2S7 1318 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 ZNF532Q9HCE3 1301 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 UBE2Q2LH0YL09 131 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 LDHCP07864 332 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 PDE6AP16499 860 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 PDE4AP27815 886 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 TNNI2P48788 182 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 RGS3P49796 1198 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 PDE1AP54750 535 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 GSTO1P78417 241 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 MAP3K12Q12852 859 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 GRM1Q13255 1194 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 TNFAIP1Q13829 316 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 CYP4F22Q6NT55 531 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 PAXIP1Q6ZW49 1069 aaPredicted RBP9.37□□□□□ -0.91
CPSF4-202ENST00000412686 SH3BP5LQ7L8J4 393 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 SKAP1Q86WV1 359 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 SLF2Q8IX21 1173 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 GPATCH3Q96I76 525 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.37□□□□□ -0.91
CPSF4-202ENST00000412686 AK9Q5TCS8 1911 aa9.37□□□□□ -0.91
CPSF4-202ENST00000412686 SIPA1L1O43166 1804 aa9.36□□□□□ -0.91
CPSF4-202ENST00000412686 TCRBV5S4A2TA0A5A2 114 aa9.36□□□□□ -0.91
CPSF4-202ENST00000412686 RASSF10A6NK89 507 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms