RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 PPATQ06203 517 aa20.91■□□□□ 0.94
MRPL55-220ENST00000411464 LPIN2Q92539 896 aa20.91■□□□□ 0.94
MRPL55-220ENST00000411464 ZNF521Q96K83 1311 aa20.91■□□□□ 0.94
MRPL55-220ENST00000411464 ARHGAP39Q9C0H5 1083 aa20.9■□□□□ 0.94
MRPL55-220ENST00000411464 LAMB1P07942 1786 aa20.9■□□□□ 0.94
MRPL55-220ENST00000411464 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.89■□□□□ 0.93
MRPL55-220ENST00000411464 FAM151AQ8WW52 585 aa20.89■□□□□ 0.93
MRPL55-220ENST00000411464 SSH1Q8WYL5 1049 aa20.89■□□□□ 0.93
MRPL55-220ENST00000411464 RPAP1Q9BWH6 1393 aaPredicted RBP20.88■□□□□ 0.93
MRPL55-220ENST00000411464 E9PSI1 815 aa20.88■□□□□ 0.93
MRPL55-220ENST00000411464 INPP5BP32019 993 aa20.88■□□□□ 0.93
MRPL55-220ENST00000411464 PRMT2P55345 433 aa20.88■□□□□ 0.93
MRPL55-220ENST00000411464 TCP10Q12799 353 aa20.88■□□□□ 0.93
MRPL55-220ENST00000411464 SH3TC2Q8TF17 1288 aa20.88■□□□□ 0.93
MRPL55-220ENST00000411464 RFX5P48382 616 aaPredicted RBP20.87■□□□□ 0.93
MRPL55-220ENST00000411464 CDC42EP5Q6NZY7 148 aa20.87■□□□□ 0.93
MRPL55-220ENST00000411464 GNL3LQ9NVN8 582 aaKnown RBP20.87■□□□□ 0.93
MRPL55-220ENST00000411464 OTOFQ9HC10 1997 aa20.86■□□□□ 0.93
MRPL55-220ENST00000411464 PDHXO00330 501 aa20.86■□□□□ 0.93
MRPL55-220ENST00000411464 C17orf99Q6UX52 265 aa20.86■□□□□ 0.93
MRPL55-220ENST00000411464 ANKRD23Q86SG2 305 aa20.86■□□□□ 0.93
MRPL55-220ENST00000411464 DAGLAQ9Y4D2 1042 aa20.86■□□□□ 0.93
MRPL55-220ENST00000411464 ECM2O94769 699 aaPredicted RBP20.85■□□□□ 0.93
MRPL55-220ENST00000411464 LDHBP07195 334 aaKnown RBP20.85■□□□□ 0.93
MRPL55-220ENST00000411464 HOXD10P28358 340 aa20.85■□□□□ 0.93
MRPL55-220ENST00000411464 PSMC4P43686 418 aa20.85■□□□□ 0.93
MRPL55-220ENST00000411464 DIXDC1Q155Q3 683 aa20.85■□□□□ 0.93
MRPL55-220ENST00000411464 ATG9AQ7Z3C6 839 aa20.85■□□□□ 0.93
MRPL55-220ENST00000411464 USP40Q9NVE5 1235 aa20.85■□□□□ 0.93
MRPL55-220ENST00000411464 CEP126Q9P2H0 1117 aa20.85■□□□□ 0.93
MRPL55-220ENST00000411464 CPA4Q9UI42 421 aa20.85■□□□□ 0.93
MRPL55-220ENST00000411464 ZNF112Q9UJU3 913 aa20.85■□□□□ 0.93
MRPL55-220ENST00000411464 KIAA0100Q14667 2235 aaKnown RBP20.85■□□□□ 0.93
MRPL55-220ENST00000411464 ARAP2Q8WZ64 1704 aa20.84■□□□□ 0.93
MRPL55-220ENST00000411464 PRDX5P30044 214 aa20.84■□□□□ 0.93
MRPL55-220ENST00000411464 ATP2B3Q16720 1220 aa20.84■□□□□ 0.93
MRPL55-220ENST00000411464 SIL1Q9H173 461 aa20.84■□□□□ 0.93
MRPL55-220ENST00000411464 FBXO3Q9UK99 471 aa20.84■□□□□ 0.93
MRPL55-220ENST00000411464 KCNH4Q9UQ05 1017 aa20.84■□□□□ 0.93
MRPL55-220ENST00000411464 FMNL1O95466 1100 aaPredicted RBP20.83■□□□□ 0.93
MRPL55-220ENST00000411464 UBTFL1P0CB47 393 aaPredicted RBP20.83■□□□□ 0.93
MRPL55-220ENST00000411464 NFIAQ12857 509 aa20.83■□□□□ 0.93
MRPL55-220ENST00000411464 ALDH1L2Q3SY69 923 aa20.83■□□□□ 0.93
MRPL55-220ENST00000411464 CIAO1O76071 339 aa20.82■□□□□ 0.92
MRPL55-220ENST00000411464 NOL9Q5SY16 702 aaKnown RBP20.82■□□□□ 0.92
MRPL55-220ENST00000411464 RAET1EQ8TD07 263 aa20.82■□□□□ 0.92
MRPL55-220ENST00000411464 TRIM47Q96LD4 638 aa20.82■□□□□ 0.92
MRPL55-220ENST00000411464 SMC4Q9NTJ3 1288 aa20.82■□□□□ 0.92
MRPL55-220ENST00000411464 FAM198AQ9UFP1 575 aa20.82■□□□□ 0.92
MRPL55-220ENST00000411464 SRRDQ9UH36 339 aa20.82■□□□□ 0.92
MRPL55-220ENST00000411464 DENND2AQ9ULE3 1009 aa20.82■□□□□ 0.92
MRPL55-220ENST00000411464 HDAC5Q9UQL6 1122 aa20.82■□□□□ 0.92
MRPL55-220ENST00000411464 SEMA3EO15041 775 aa20.81■□□□□ 0.92
MRPL55-220ENST00000411464 SLFN5Q08AF3 891 aa20.81■□□□□ 0.92
MRPL55-220ENST00000411464 BRCA2P51587 3418 aa20.81■□□□□ 0.92
MRPL55-220ENST00000411464 OSBPP22059 807 aa20.8■□□□□ 0.92
MRPL55-220ENST00000411464 PARK7Q99497 189 aaKnown RBP20.8■□□□□ 0.92
MRPL55-220ENST00000411464 COLQQ9Y215 455 aaPredicted RBP20.8■□□□□ 0.92
MRPL55-220ENST00000411464 SALL1Q9NSC2 1324 aa20.79■□□□□ 0.92
MRPL55-220ENST00000411464 CXCL11O14625 94 aa20.79■□□□□ 0.92
MRPL55-220ENST00000411464 CTGFP29279 349 aa20.79■□□□□ 0.92
MRPL55-220ENST00000411464 GRK4P32298 578 aa20.79■□□□□ 0.92
MRPL55-220ENST00000411464 IL15P40933 162 aaPredicted RBP20.79■□□□□ 0.92
MRPL55-220ENST00000411464 MOGSQ13724 837 aa20.79■□□□□ 0.92
MRPL55-220ENST00000411464 ZFPM1Q8IX07 1006 aa20.79■□□□□ 0.92
MRPL55-220ENST00000411464 ZGPATQ8N5A5 531 aaKnown RBP20.79■□□□□ 0.92
MRPL55-220ENST00000411464 NKX2-3Q8TAU0 364 aa20.79■□□□□ 0.92
MRPL55-220ENST00000411464 PICK1Q9NRD5 415 aa20.79■□□□□ 0.92
MRPL55-220ENST00000411464 RBBP6Q7Z6E9 1792 aaKnown RBP20.79■□□□□ 0.92
MRPL55-220ENST00000411464 H0YGN5 161 aa20.78■□□□□ 0.92
MRPL55-220ENST00000411464 PHKA1P46020 1223 aa20.78■□□□□ 0.92
MRPL55-220ENST00000411464 FXR1P51114 621 aaKnown RBP eCLIP20.78■□□□□ 0.92
MRPL55-220ENST00000411464 MTFR1Q15390 333 aa20.78■□□□□ 0.92
MRPL55-220ENST00000411464 ZSCAN29Q8IWY8 852 aaPredicted RBP20.78■□□□□ 0.92
MRPL55-220ENST00000411464 BIN2Q9UBW5 565 aaPredicted RBP20.78■□□□□ 0.92
MRPL55-220ENST00000411464 MYPNQ86TC9 1320 aa20.78■□□□□ 0.92
MRPL55-220ENST00000411464 ENTPD3O75355 529 aa20.77■□□□□ 0.92
MRPL55-220ENST00000411464 RGS3P49796 1198 aa20.77■□□□□ 0.92
MRPL55-220ENST00000411464 FCGRTP55899 365 aa20.77■□□□□ 0.92
MRPL55-220ENST00000411464 FASTKD5Q7L8L6 764 aaKnown RBP20.77■□□□□ 0.92
MRPL55-220ENST00000411464 SLF2Q8IX21 1173 aa20.77■□□□□ 0.92
MRPL55-220ENST00000411464 SCYL3Q8IZE3 742 aa20.77■□□□□ 0.92
MRPL55-220ENST00000411464 DPF3Q92784 378 aa20.77■□□□□ 0.92
MRPL55-220ENST00000411464 IDI2Q9BXS1 227 aa20.77■□□□□ 0.92
MRPL55-220ENST00000411464 ZHX2Q9Y6X8 837 aa20.77■□□□□ 0.92
MRPL55-220ENST00000411464 ADGRA2Q96PE1 1338 aa20.77■□□□□ 0.91
MRPL55-220ENST00000411464 PHF20L1A8MW92 1017 aa20.76■□□□□ 0.91
MRPL55-220ENST00000411464 CYP2C8P10632 490 aa20.76■□□□□ 0.91
MRPL55-220ENST00000411464 GPAT2Q6NUI2 795 aa20.76■□□□□ 0.91
MRPL55-220ENST00000411464 DZIP1Q86YF9 867 aaKnown RBP20.76■□□□□ 0.91
MRPL55-220ENST00000411464 NOB1Q9ULX3 412 aaKnown RBP20.76■□□□□ 0.91
MRPL55-220ENST00000411464 LRRFIP2Q9Y608 721 aaKnown RBP20.76■□□□□ 0.91
MRPL55-220ENST00000411464 UBXN2AP68543 259 aa20.75■□□□□ 0.91
MRPL55-220ENST00000411464 CCDC102BQ68D86 513 aa20.75■□□□□ 0.91
MRPL55-220ENST00000411464 CDCA7LQ96GN5 454 aa20.75■□□□□ 0.91
MRPL55-220ENST00000411464 API5Q9BZZ5 524 aaKnown RBP20.75■□□□□ 0.91
MRPL55-220ENST00000411464 RNF208Q9H0X6 261 aa20.75■□□□□ 0.91
MRPL55-220ENST00000411464 ABCF2Q9UG63 623 aa20.75■□□□□ 0.91
MRPL55-220ENST00000411464 PA2G4Q9UQ80 394 aaKnown RBP20.75■□□□□ 0.91
MRPL55-220ENST00000411464 GJB1P08034 283 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms