RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 STK31Q9BXU1 1019 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZNF341Q9BYN7 854 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 UBE2OQ9C0C9 1292 aaKnown RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 NBPF3Q9H094 633 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 MYH16Q9H6N6 1097 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 PAK6Q9NQU5 681 aaPredicted RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 PRDM6Q9NQX0 595 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 IFT57Q9NWB7 429 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 TAOK2Q9UL54 1235 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 GABRQQ9UN88 632 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 KCNH4Q9UQ05 1017 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 RBBP6Q7Z6E9 1792 aaKnown RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 DDX60Q8IY21 1712 aaKnown RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 POTEB2H3BUK9 544 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 PLIN1O60240 522 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 FRAT2O75474 233 aaPredicted RBP3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 CYP2C8P10632 490 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 SYN1P17600 705 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 INPP5BP32019 993 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 MAGEA10P43363 369 aaPredicted RBP3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 GYG1P46976 350 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 CASP7P55210 303 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 MOGSQ13724 837 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 UBE4AQ14139 1066 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 RALBP1Q15311 655 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 CCDC57Q2TAC2 916 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 CAVIN4Q5BKX8 364 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 NOL9Q5SY16 702 aaKnown RBP3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZNF697Q5TEC3 545 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 GPAT2Q6NUI2 795 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 MIGA2Q7L4E1 593 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 VPS37DQ86XT2 251 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 C8orf58Q8NAV2 365 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 LINS1Q8NG48 757 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 SMCR8Q8TEV9 937 aaPredicted RBP3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 DIS3LQ8TF46 1054 aaKnown RBP3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 SYMPKQ92797 1274 aaKnown RBP3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 FAM84BQ96KN1 310 aaPredicted RBP3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZDHHC15Q96MV8 337 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 GUCD1Q96NT3 240 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 MRIQ9BWK5 157 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 C11orf49Q9H6J7 331 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 HMX1Q9NP08 348 aaPredicted RBP3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 CNNM1Q9NRU3 951 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZNF112Q9UJU3 913 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 SLC45A1Q9Y2W3 748 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 SUGT1Q9Y2Z0 365 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 CHMP3Q9Y3E7 222 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 LAMB2P55268 1798 aa3.01□□□□□ -1.93
RNU4-53P-201ENST00000410828 MAST3O60307 1309 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 A0A0G2JLL6 359 aaPredicted RBP3□□□□□ -1.93
RNU4-53P-201ENST00000410828 HMGCRP04035 888 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 SLC4A2P04920 1241 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 COL9A1P20849 921 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 MDM2Q00987 491 aaPredicted RBP3□□□□□ -1.93
RNU4-53P-201ENST00000410828 FLIIQ13045 1269 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 CHAF1AQ13111 956 aaPredicted RBP3□□□□□ -1.93
RNU4-53P-201ENST00000410828 FKBP5Q13451 457 aaPredicted RBP3□□□□□ -1.93
RNU4-53P-201ENST00000410828 FAM110CQ1W6H9 321 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 APOBEC3HQ6NTF7 200 aaKnown RBP3□□□□□ -1.93
RNU4-53P-201ENST00000410828 HHIPL2Q6UWX4 724 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 LMBR1LQ6UX01 489 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 GADL1Q6ZQY3 521 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 PRRT2Q7Z6L0 340 aaPredicted RBP3□□□□□ -1.93
RNU4-53P-201ENST00000410828 SCYL3Q8IZE3 742 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 ANKRD13CQ8N6S4 541 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 TSPYL6Q8N831 410 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 MAFAQ8NHW3 353 aaPredicted RBP3□□□□□ -1.93
RNU4-53P-201ENST00000410828 FAM151AQ8WW52 585 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 DNAAF4Q8WXU2 420 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 FAM161BQ96MY7 647 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 LBHD1Q9BQE6 289 aaPredicted RBP3□□□□□ -1.93
RNU4-53P-201ENST00000410828 PICK1Q9NRD5 415 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 PNMA3Q9UL41 463 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 OGDHLQ9ULD0 1010 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 ADAMTS8Q9UP79 889 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZHX2Q9Y6X8 837 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 MYO9BQ13459 2157 aa3□□□□□ -1.93
RNU4-53P-201ENST00000410828 RPAP1Q9BWH6 1393 aaPredicted RBP3□□□□□ -1.93
RNU4-53P-201ENST00000410828 MROH5Q6ZUA9 1318 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 PSME4Q14997 1843 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 PHF20L1A8MW92 1017 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 APAF1O14727 1248 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 PTPRAP18433 802 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZEB1P37275 1124 aaPredicted RBP2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 GCLCP48506 637 aaPredicted RBP2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 FOXO4P98177 505 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 TCP10Q12799 353 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 GRIK5Q16478 980 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 TWISTNBQ3B726 338 aaPredicted RBP2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 TJAP1Q5JTD0 557 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 CDC42EP5Q6NZY7 148 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 G2E3Q7L622 706 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 FBXO33Q7Z6M2 555 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZSCAN29Q8IWY8 852 aaPredicted RBP2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 WDR66Q8TBY9 1149 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZNF594Q96JF6 807 aaPredicted RBP2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 CDX2Q99626 313 aaPredicted RBP2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 SEMA6BQ9H3T3 888 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms