RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PARNO95453 639 aaKnown RBP6.82□□□□□ -1.32
LSM5-205ENST00000409952 PTPRAP18433 802 aa6.82□□□□□ -1.32
LSM5-205ENST00000409952 EPHA1P21709 976 aa6.82□□□□□ -1.32
LSM5-205ENST00000409952 PLEKHG4Q58EX7 1191 aa6.82□□□□□ -1.32
LSM5-205ENST00000409952 TMEM130Q8N3G9 435 aa6.82□□□□□ -1.32
LSM5-205ENST00000409952 RNPC3Q96LT9 517 aaKnown RBP6.82□□□□□ -1.32
LSM5-205ENST00000409952 OSBPL7Q9BZF2 842 aa6.82□□□□□ -1.32
LSM5-205ENST00000409952 TMX1Q9H3N1 280 aa6.82□□□□□ -1.32
LSM5-205ENST00000409952 ZNF408Q9H9D4 720 aa6.82□□□□□ -1.32
LSM5-205ENST00000409952 SPC25Q9HBM1 224 aa6.82□□□□□ -1.32
LSM5-205ENST00000409952 PRKAB1Q9Y478 270 aa6.82□□□□□ -1.32
LSM5-205ENST00000409952 RIPOR2Q9Y4F9 1068 aa6.82□□□□□ -1.32
LSM5-205ENST00000409952 TXNRD3Q86VQ6 643 aa6.81□□□□□ -1.32
LSM5-205ENST00000409952 GALNT11Q8NCW6 608 aa6.81□□□□□ -1.32
LSM5-205ENST00000409952 DCAF11Q8TEB1 546 aa6.81□□□□□ -1.32
LSM5-205ENST00000409952 WNT8BQ93098 351 aa6.81□□□□□ -1.32
LSM5-205ENST00000409952 SRPK1Q96SB4 655 aaKnown RBP6.81□□□□□ -1.32
LSM5-205ENST00000409952 OSMRQ99650 979 aa6.81□□□□□ -1.32
LSM5-205ENST00000409952 LACRTQ9GZZ8 138 aa6.81□□□□□ -1.32
LSM5-205ENST00000409952 COPRSQ9NQ92 184 aa6.81□□□□□ -1.32
LSM5-205ENST00000409952 LOC102724159A0A0B4J2E5 919 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 PPP1R12AO14974 1030 aaPredicted RBP6.8□□□□□ -1.32
LSM5-205ENST00000409952 TRPA1O75762 1119 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 USP17L7P0C7H9 530 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 DOC2BQ14184 412 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 PWP2Q15269 919 aaKnown RBP6.8□□□□□ -1.32
LSM5-205ENST00000409952 HSP90AB2PQ58FF8 381 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 NKAPLQ5M9Q1 402 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 KIAA0319Q5VV43 1072 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 Q6ZS46 218 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 CCDC74AQ96AQ1 378 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 PSMD1Q99460 953 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 SPON2Q9BUD6 331 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 TRIM55Q9BYV6 548 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 SRCIN1Q9C0H9 1055 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 SH2B1Q9NRF2 756 aaPredicted RBP6.8□□□□□ -1.32
LSM5-205ENST00000409952 LATS2Q9NRM7 1088 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 SLC52A1Q9NWF4 448 aa6.8□□□□□ -1.32
LSM5-205ENST00000409952 A0A1W2PP55 124 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 H3BRJ5 948 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 LINC01387J3KSC0 135 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 U2SURPO15042 1029 aaKnown RBP6.79□□□□□ -1.32
LSM5-205ENST00000409952 NASPP49321 788 aaPredicted RBP6.79□□□□□ -1.32
LSM5-205ENST00000409952 PLEKHG6Q3KR16 790 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 USPL1Q5W0Q7 1092 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 PI16Q6UXB8 463 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 ANKS3Q6ZW76 656 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 LRP10Q7Z4F1 713 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 VN1R5Q7Z5H4 357 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 CCNJLQ8IV13 435 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 KIAA0825Q8IV33 1275 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 KLHL23Q8NBE8 558 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 SLKQ9H2G2 1235 aaPredicted RBP6.79□□□□□ -1.32
LSM5-205ENST00000409952 OSGEPQ9NPF4 335 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 TPSG1Q9NRR2 321 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 CHPF2Q9P2E5 772 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 STRIP2Q9ULQ0 834 aa6.79□□□□□ -1.32
LSM5-205ENST00000409952 FSCN2O14926 492 aa6.78□□□□□ -1.32
LSM5-205ENST00000409952 TPD52L2O43399 206 aaKnown RBP6.78□□□□□ -1.32
LSM5-205ENST00000409952 POLR3DP05423 398 aaPredicted RBP6.78□□□□□ -1.32
LSM5-205ENST00000409952 NOS3P29474 1203 aa6.78□□□□□ -1.32
LSM5-205ENST00000409952 PIP4K2BP78356 416 aa6.78□□□□□ -1.32
LSM5-205ENST00000409952 RSPO4Q2I0M5 234 aaPredicted RBP6.78□□□□□ -1.32
LSM5-205ENST00000409952 FOXD4L6Q3SYB3 417 aaPredicted RBP6.78□□□□□ -1.32
LSM5-205ENST00000409952 FOXD4L3Q6VB84 417 aaPredicted RBP6.78□□□□□ -1.32
LSM5-205ENST00000409952 RPUSD2Q8IZ73 545 aaKnown RBP6.78□□□□□ -1.32
LSM5-205ENST00000409952 EPS8L3Q8TE67 593 aaKnown RBP6.78□□□□□ -1.32
LSM5-205ENST00000409952 WFDC12Q8WWY7 111 aa6.78□□□□□ -1.32
LSM5-205ENST00000409952 BSNDQ8WZ55 320 aa6.78□□□□□ -1.32
LSM5-205ENST00000409952 TCF12Q99081 682 aa6.78□□□□□ -1.32
LSM5-205ENST00000409952 MRPL18Q9H0U6 180 aaKnown RBP6.78□□□□□ -1.32
LSM5-205ENST00000409952 IRF2BPLQ9H1B7 796 aa6.78□□□□□ -1.32
LSM5-205ENST00000409952 MYH16Q9H6N6 1097 aa6.78□□□□□ -1.32
LSM5-205ENST00000409952 KBTBD4Q9NVX7 518 aa6.78□□□□□ -1.32
LSM5-205ENST00000409952 SNTG2Q9NY99 539 aa6.78□□□□□ -1.32
LSM5-205ENST00000409952 BTBD11A6QL63 1104 aa6.77□□□□□ -1.33
LSM5-205ENST00000409952 F8W735 103 aaPredicted RBP6.77□□□□□ -1.33
LSM5-205ENST00000409952 KLF4O43474 513 aa6.77□□□□□ -1.33
LSM5-205ENST00000409952 RAB33AQ14088 237 aa6.77□□□□□ -1.33
LSM5-205ENST00000409952 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.77□□□□□ -1.33
LSM5-205ENST00000409952 DZIP1LQ8IYY4 767 aaKnown RBP6.77□□□□□ -1.33
LSM5-205ENST00000409952 DEPDC7Q96QD5 511 aa6.77□□□□□ -1.33
LSM5-205ENST00000409952 NOC4LQ9BVI4 516 aaKnown RBP6.77□□□□□ -1.33
LSM5-205ENST00000409952 KCNK4Q9NYG8 393 aa6.77□□□□□ -1.33
LSM5-205ENST00000409952 CDC45O75419 566 aa6.76□□□□□ -1.33
LSM5-205ENST00000409952 CD68P34810 354 aaPredicted RBP6.76□□□□□ -1.33
LSM5-205ENST00000409952 ETFBP38117 255 aa6.76□□□□□ -1.33
LSM5-205ENST00000409952 PWP1Q13610 501 aa6.76□□□□□ -1.33
LSM5-205ENST00000409952 RASA3Q14644 834 aa6.76□□□□□ -1.33
LSM5-205ENST00000409952 GORABQ5T7V8 394 aa6.76□□□□□ -1.33
LSM5-205ENST00000409952 TXNDC11Q6PKC3 985 aa6.76□□□□□ -1.33
LSM5-205ENST00000409952 RSRP1Q9BUV0 290 aa6.76□□□□□ -1.33
LSM5-205ENST00000409952 SOX17Q9H6I2 414 aaPredicted RBP6.76□□□□□ -1.33
LSM5-205ENST00000409952 SEC31BQ9NQW1 1179 aa6.76□□□□□ -1.33
LSM5-205ENST00000409952 DDX56Q9NY93 547 aaKnown RBP6.76□□□□□ -1.33
LSM5-205ENST00000409952 USP21Q9UK80 565 aa6.76□□□□□ -1.33
LSM5-205ENST00000409952 EFR3BQ9Y2G0 817 aa6.76□□□□□ -1.33
LSM5-205ENST00000409952 FAN1Q9Y2M0 1017 aa6.76□□□□□ -1.33
LSM5-205ENST00000409952 ADAM11O75078 769 aa6.75□□□□□ -1.33
LSM5-205ENST00000409952 S100BP04271 92 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms