RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 RPAP1Q9BWH6 1393 aaPredicted RBP24.17■■□□□ 1.46
TSPAN4-209ENST00000409543 OS9Q13438 667 aaPredicted RBP24.17■■□□□ 1.46
TSPAN4-209ENST00000409543 FAM151AQ8WW52 585 aa24.17■■□□□ 1.46
TSPAN4-209ENST00000409543 HMG20BQ9P0W2 317 aa24.17■■□□□ 1.46
TSPAN4-209ENST00000409543 ARID4AP29374 1257 aaPredicted RBP24.16■■□□□ 1.46
TSPAN4-209ENST00000409543 MAP3K9P80192 1104 aa24.16■■□□□ 1.46
TSPAN4-209ENST00000409543 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.16■■□□□ 1.46
TSPAN4-209ENST00000409543 DZIP1Q86YF9 867 aaKnown RBP24.16■■□□□ 1.46
TSPAN4-209ENST00000409543 SLF2Q8IX21 1173 aa24.16■■□□□ 1.46
TSPAN4-209ENST00000409543 SPATA5Q8NB90 893 aa24.16■■□□□ 1.46
TSPAN4-209ENST00000409543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.16■■□□□ 1.463e-7■■■□□ 17.9
TSPAN4-209ENST00000409543 USP40Q9NVE5 1235 aa24.16■■□□□ 1.46
TSPAN4-209ENST00000409543 RCAN3Q9UKA8 241 aa24.16■■□□□ 1.46
TSPAN4-209ENST00000409543 GAKO14976 1311 aa24.15■■□□□ 1.46
TSPAN4-209ENST00000409543 OTOFQ9HC10 1997 aa24.15■■□□□ 1.46
TSPAN4-209ENST00000409543 TBC1D8O95759 1140 aa24.15■■□□□ 1.46
TSPAN4-209ENST00000409543 UQCRFS1P1P0C7P4 283 aa24.15■■□□□ 1.46
TSPAN4-209ENST00000409543 TNNI3KQ59H18 835 aa24.15■■□□□ 1.46
TSPAN4-209ENST00000409543 CEP85Q6P2H3 762 aa24.15■■□□□ 1.46
TSPAN4-209ENST00000409543 FAM163AQ96GL9 167 aaPredicted RBP24.15■■□□□ 1.46
TSPAN4-209ENST00000409543 CFHR5Q9BXR6 569 aa24.15■■□□□ 1.46
TSPAN4-209ENST00000409543 ELP3Q9H9T3 547 aa24.15■■□□□ 1.46
TSPAN4-209ENST00000409543 FPGT-TNNI3KV9GXZ4 949 aa24.15■■□□□ 1.46
TSPAN4-209ENST00000409543 LAMB1P07942 1786 aa24.15■■□□□ 1.46
TSPAN4-209ENST00000409543 MYH2Q9UKX2 1941 aa24.14■■□□□ 1.46
TSPAN4-209ENST00000409543 ALDH1A1P00352 501 aa24.14■■□□□ 1.45
TSPAN4-209ENST00000409543 GJA5P36382 358 aa24.14■■□□□ 1.45
TSPAN4-209ENST00000409543 DGKZQ13574 1117 aa24.14■■□□□ 1.45
TSPAN4-209ENST00000409543 ERICH6Q7L0X2 663 aa24.14■■□□□ 1.45
TSPAN4-209ENST00000409543 MCOLN1Q9GZU1 580 aa24.14■■□□□ 1.45
TSPAN4-209ENST00000409543 NFIAQ12857 509 aa24.13■■□□□ 1.45
TSPAN4-209ENST00000409543 VGLL4Q14135 290 aa24.13■■□□□ 1.45
TSPAN4-209ENST00000409543 NOM1Q5C9Z4 860 aaKnown RBP24.13■■□□□ 1.45
TSPAN4-209ENST00000409543 DCAF15Q66K64 600 aa24.13■■□□□ 1.45
TSPAN4-209ENST00000409543 IFNL1Q8IU54 200 aa24.13■■□□□ 1.45
TSPAN4-209ENST00000409543 OPTNQ96CV9 577 aa24.13■■□□□ 1.45
TSPAN4-209ENST00000409543 CSADQ9Y600 493 aa24.13■■□□□ 1.45
TSPAN4-209ENST00000409543 TCP10Q12799 353 aa24.12■■□□□ 1.45
TSPAN4-209ENST00000409543 PI16Q6UXB8 463 aa24.12■■□□□ 1.45
TSPAN4-209ENST00000409543 FAM198AQ9UFP1 575 aa24.12■■□□□ 1.45
TSPAN4-209ENST00000409543 MCAMP43121 646 aa24.11■■□□□ 1.45
TSPAN4-209ENST00000409543 MECOMQ03112 1051 aa24.11■■□□□ 1.45
TSPAN4-209ENST00000409543 CCDC158Q5M9N0 1113 aa24.11■■□□□ 1.45
TSPAN4-209ENST00000409543 DBNDD2Q9BQY9 259 aa24.11■■□□□ 1.45
TSPAN4-209ENST00000409543 IDI2Q9BXS1 227 aa24.11■■□□□ 1.45
TSPAN4-209ENST00000409543 DDX19BQ9UMR2 479 aa24.11■■□□□ 1.45
TSPAN4-209ENST00000409543 MROH7-TTC4A0A0A0MT08 1334 aa24.1■■□□□ 1.45
TSPAN4-209ENST00000409543 TESPA1A2RU30 521 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-209ENST00000409543 TBC1D9Q6ZT07 1266 aa24.1■■□□□ 1.45
TSPAN4-209ENST00000409543 WRNIP1Q96S55 665 aa24.1■■□□□ 1.45
TSPAN4-209ENST00000409543 ZNF341Q9BYN7 854 aa24.1■■□□□ 1.45
TSPAN4-209ENST00000409543 GPR75-ASB3A0A0A6YYF3 556 aa24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 GPR25O00155 361 aa24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 IGF2BP3O00425 579 aaKnown RBP eCLIP24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 ENTPD3O75355 529 aa24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 GSTO1P78417 241 aa24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 TTC39AQ5SRH9 613 aa24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 MIGA2Q7L4E1 593 aa24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 ZNF384Q8TF68 577 aa24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 ZNF296Q8WUU4 475 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 CNKSR2Q8WXI2 1034 aa24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 ZNF512BQ96KM6 892 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 COG6Q9Y2V7 657 aa24.09■■□□□ 1.45
TSPAN4-209ENST00000409543 SPDYE5A6NIY4 337 aa24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 LDHCP07864 332 aa24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 BTDP43251 543 aa24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 OTUD7BQ6GQQ9 843 aa24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 CTU1Q7Z7A3 348 aaKnown RBP24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 ERC1Q8IUD2 1116 aa24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 ZKSCAN4Q969J2 545 aaPredicted RBP24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 NSUN4Q96CB9 384 aaKnown RBP24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 MS4A4AQ96JQ5 239 aa24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 R3HDMLQ9H3Y0 253 aa24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 ZBTB40Q9NUA8 1239 aa24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 SNCAIPQ9Y6H5 919 aa24.08■■□□□ 1.45
TSPAN4-209ENST00000409543 RFX7Q2KHR2 1363 aa24.07■■□□□ 1.44
TSPAN4-209ENST00000409543 RGS3P49796 1198 aa24.07■■□□□ 1.44
TSPAN4-209ENST00000409543 ERO1BQ86YB8 467 aa24.07■■□□□ 1.44
TSPAN4-209ENST00000409543 ZFPM1Q8IX07 1006 aa24.07■■□□□ 1.44
TSPAN4-209ENST00000409543 RPAP2Q8IXW5 612 aaPredicted RBP24.07■■□□□ 1.44
TSPAN4-209ENST00000409543 CHMP4BQ9H444 224 aaKnown RBP24.07■■□□□ 1.44
TSPAN4-209ENST00000409543 RAI14Q9P0K7 980 aa24.07■■□□□ 1.44
TSPAN4-209ENST00000409543 ZNF112Q9UJU3 913 aa24.07■■□□□ 1.44
TSPAN4-209ENST00000409543 DBNLQ9UJU6 430 aaKnown RBP24.07■■□□□ 1.44
TSPAN4-209ENST00000409543 AK9Q5TCS8 1911 aa24.06■■□□□ 1.44
TSPAN4-209ENST00000409543 WDHD1O75717 1129 aaPredicted RBP24.06■■□□□ 1.44
TSPAN4-209ENST00000409543 GTF2A2P52657 109 aa24.06■■□□□ 1.44
TSPAN4-209ENST00000409543 HSP90AB4PQ58FF6 505 aa24.06■■□□□ 1.44
TSPAN4-209ENST00000409543 EAF2Q96CJ1 260 aaPredicted RBP24.06■■□□□ 1.44
TSPAN4-209ENST00000409543 OTUD5Q96G74 571 aa24.06■■□□□ 1.44
TSPAN4-209ENST00000409543 PTPN18Q99952 460 aa24.06■■□□□ 1.44
TSPAN4-209ENST00000409543 SNRKQ9NRH2 765 aa24.06■■□□□ 1.44
TSPAN4-209ENST00000409543 LRP2BPQ9P2M1 347 aa24.06■■□□□ 1.44
TSPAN4-209ENST00000409543 EXOC6BQ9Y2D4 811 aa24.06■■□□□ 1.44
TSPAN4-209ENST00000409543 MAP4K4O95819 1239 aaPredicted RBP24.05■■□□□ 1.44
TSPAN4-209ENST00000409543 RHBDL3P58872 404 aa24.05■■□□□ 1.44
TSPAN4-209ENST00000409543 CCDC8Q9H0W5 538 aaPredicted RBP24.05■■□□□ 1.44
TSPAN4-209ENST00000409543 CCDC85CA6NKD9 419 aa24.04■■□□□ 1.44
TSPAN4-209ENST00000409543 FKTNO75072 461 aa24.04■■□□□ 1.44
TSPAN4-209ENST00000409543 INPP5BP32019 993 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms