RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SAPCD2Q86UD0 394 aa24.15■■□□□ 1.46
PDLIM2-207ENST00000409417 C2orf69Q8N8R5 385 aa24.15■■□□□ 1.46
PDLIM2-207ENST00000409417 USP40Q9NVE5 1235 aa24.15■■□□□ 1.46
PDLIM2-207ENST00000409417 TLL2Q9Y6L7 1015 aa24.15■■□□□ 1.46
PDLIM2-207ENST00000409417 GOLIM4O00461 696 aa24.14■■□□□ 1.46
PDLIM2-207ENST00000409417 NF2P35240 595 aa24.14■■□□□ 1.46
PDLIM2-207ENST00000409417 BTDP43251 543 aa24.14■■□□□ 1.46
PDLIM2-207ENST00000409417 MAP3K12Q12852 859 aa24.14■■□□□ 1.46
PDLIM2-207ENST00000409417 TMED8Q6PL24 325 aaPredicted RBP24.14■■□□□ 1.46
PDLIM2-207ENST00000409417 FAM83AQ86UY5 434 aa24.14■■□□□ 1.46
PDLIM2-207ENST00000409417 MYH2Q9UKX2 1941 aa24.14■■□□□ 1.45
PDLIM2-207ENST00000409417 RASSF10A6NK89 507 aa24.13■■□□□ 1.45
PDLIM2-207ENST00000409417 FKBP1BP68106 108 aa24.13■■□□□ 1.45
PDLIM2-207ENST00000409417 PAG1Q9NWQ8 432 aa24.13■■□□□ 1.45
PDLIM2-207ENST00000409417 SUPT20HL1Q3ZLR7 823 aa24.13■■□□□ 1.45
PDLIM2-207ENST00000409417 OTUD7AQ8TE49 926 aaPredicted RBP24.13■■□□□ 1.45
PDLIM2-207ENST00000409417 TMEM39BQ9GZU3 492 aa24.13■■□□□ 1.45
PDLIM2-207ENST00000409417 TTC41PQ6P2S7 1318 aa24.12■■□□□ 1.45
PDLIM2-207ENST00000409417 CNTNAP1P78357 1384 aa24.12■■□□□ 1.45
PDLIM2-207ENST00000409417 MAP4K4O95819 1239 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-207ENST00000409417 CENPBP07199 599 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-207ENST00000409417 TEPSINQ96N21 525 aa24.12■■□□□ 1.45
PDLIM2-207ENST00000409417 MX1P20591 662 aa24.11■■□□□ 1.45
PDLIM2-207ENST00000409417 DEFB115Q30KQ5 88 aa24.11■■□□□ 1.45
PDLIM2-207ENST00000409417 TSHZ3Q63HK5 1081 aa24.11■■□□□ 1.45
PDLIM2-207ENST00000409417 KLRG1Q96E93 195 aa24.11■■□□□ 1.45
PDLIM2-207ENST00000409417 EDC3Q96F86 508 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-207ENST00000409417 HHIPL1Q96JK4 782 aa24.11■■□□□ 1.45
PDLIM2-207ENST00000409417 IDI2Q9BXS1 227 aa24.11■■□□□ 1.45
PDLIM2-207ENST00000409417 MKRN1Q9UHC7 482 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-207ENST00000409417 BAG3O95817 575 aa24.1■■□□□ 1.45
PDLIM2-207ENST00000409417 HUNKP57058 714 aa24.1■■□□□ 1.45
PDLIM2-207ENST00000409417 RHBDL3P58872 404 aa24.1■■□□□ 1.45
PDLIM2-207ENST00000409417 NUCB1Q02818 461 aa24.1■■□□□ 1.45
PDLIM2-207ENST00000409417 NFIAQ12857 509 aa24.1■■□□□ 1.45
PDLIM2-207ENST00000409417 NBPF12Q5TAG4 269 aaPredicted RBP24.1■■□□□ 1.45
PDLIM2-207ENST00000409417 B4GALNT3Q6L9W6 998 aa24.1■■□□□ 1.45
PDLIM2-207ENST00000409417 ADGRA1Q86SQ6 560 aa24.1■■□□□ 1.45
PDLIM2-207ENST00000409417 MAGEB6Q8N7X4 407 aa24.1■■□□□ 1.45
PDLIM2-207ENST00000409417 NOL10Q9BSC4 688 aaKnown RBP24.1■■□□□ 1.45
PDLIM2-207ENST00000409417 ERC2O15083 957 aa24.09■■□□□ 1.45
PDLIM2-207ENST00000409417 CYP7A1P22680 504 aa24.09■■□□□ 1.45
PDLIM2-207ENST00000409417 PPP4CP60510 307 aa24.09■■□□□ 1.45
PDLIM2-207ENST00000409417 SALL3Q9BXA9 1300 aa24.09■■□□□ 1.45
PDLIM2-207ENST00000409417 WDHD1O75717 1129 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-207ENST00000409417 PLCG2P16885 1265 aa24.08■■□□□ 1.45
PDLIM2-207ENST00000409417 SLC9C2Q5TAH2 1124 aa24.08■■□□□ 1.45
PDLIM2-207ENST00000409417 CHD1LQ86WJ1 897 aa24.08■■□□□ 1.45
PDLIM2-207ENST00000409417 FAM151AQ8WW52 585 aa24.08■■□□□ 1.45
PDLIM2-207ENST00000409417 LNPKQ9C0E8 428 aa24.08■■□□□ 1.45
PDLIM2-207ENST00000409417 FAM198AQ9UFP1 575 aa24.08■■□□□ 1.45
PDLIM2-207ENST00000409417 PPP1R12BO60237 982 aaPredicted RBP24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 GLRX3O76003 335 aaKnown RBP24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 TTLL12Q14166 644 aaPredicted RBP24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 CDAN1Q8IWY9 1227 aa24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 PI4K2BQ8TCG2 481 aa24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 AATFQ9NY61 560 aaKnown RBP eCLIP24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 STAP2Q9UGK3 403 aa24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 RFX7Q2KHR2 1363 aa24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 RPAP1Q9BWH6 1393 aaPredicted RBP24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 MYO5AQ9Y4I1 1855 aaKnown RBP24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 MAST2Q6P0Q8 1798 aa24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 ENTPD3O75355 529 aa24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 NPM3O75607 178 aaKnown RBP24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 PDE6AP16499 860 aa24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 RGS3P49796 1198 aa24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 TCP10Q12799 353 aa24.07■■□□□ 1.44
PDLIM2-207ENST00000409417 SSC5DA1L4H1 1573 aa24.06■■□□□ 1.44
PDLIM2-207ENST00000409417 PAPPA2Q9BXP8 1791 aa24.06■■□□□ 1.44
PDLIM2-207ENST00000409417 MOB2Q70IA6 237 aa24.06■■□□□ 1.44
PDLIM2-207ENST00000409417 ARMC9Q7Z3E5 817 aa24.06■■□□□ 1.44
PDLIM2-207ENST00000409417 CERS3Q8IU89 383 aa24.06■■□□□ 1.44
PDLIM2-207ENST00000409417 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.06■■□□□ 1.44
PDLIM2-207ENST00000409417 VEGFBP49765 207 aa24.05■■□□□ 1.44
PDLIM2-207ENST00000409417 PDE1AP54750 535 aa24.05■■□□□ 1.44
PDLIM2-207ENST00000409417 PRKG1Q13976 671 aa24.05■■□□□ 1.44
PDLIM2-207ENST00000409417 SH3RF3Q8TEJ3 882 aaPredicted RBP24.05■■□□□ 1.44
PDLIM2-207ENST00000409417 HOOK2Q96ED9 719 aa24.05■■□□□ 1.44
PDLIM2-207ENST00000409417 DOCK2Q92608 1830 aa24.05■■□□□ 1.44
PDLIM2-207ENST00000409417 UBE2Q2LH0YL09 131 aa24.04■■□□□ 1.44
PDLIM2-207ENST00000409417 MAP3K11Q16584 847 aa24.04■■□□□ 1.44
PDLIM2-207ENST00000409417 PAXIP1Q6ZW49 1069 aaPredicted RBP24.04■■□□□ 1.44
PDLIM2-207ENST00000409417 ZFPM1Q8IX07 1006 aa24.04■■□□□ 1.44
PDLIM2-207ENST00000409417 TEX11Q8IYF3 940 aa24.04■■□□□ 1.44
PDLIM2-207ENST00000409417 DDX4Q9NQI0 724 aaKnown RBP24.04■■□□□ 1.44
PDLIM2-207ENST00000409417 ANGEL1Q9UNK9 670 aaKnown RBP24.04■■□□□ 1.44
PDLIM2-207ENST00000409417 PCNTO95613 3336 aa24.03■■□□□ 1.44
PDLIM2-207ENST00000409417 TCRBV5S4A2TA0A5A2 114 aa24.03■■□□□ 1.44
PDLIM2-207ENST00000409417 ECE1P42892 770 aa24.03■■□□□ 1.44
PDLIM2-207ENST00000409417 RGMBQ6NW40 437 aa24.03■■□□□ 1.44
PDLIM2-207ENST00000409417 MIGA1Q8NAN2 632 aa24.03■■□□□ 1.44
PDLIM2-207ENST00000409417 CAPNS2Q96L46 248 aa24.03■■□□□ 1.44
PDLIM2-207ENST00000409417 ZNF532Q9HCE3 1301 aa24.03■■□□□ 1.44
PDLIM2-207ENST00000409417 ADD2P35612 726 aa24.02■■□□□ 1.44
PDLIM2-207ENST00000409417 PICALMQ13492 652 aa24.02■■□□□ 1.44
PDLIM2-207ENST00000409417 LDLRAD1Q5T700 205 aa24.02■■□□□ 1.44
PDLIM2-207ENST00000409417 CYP4F22Q6NT55 531 aa24.02■■□□□ 1.44
PDLIM2-207ENST00000409417 KBTBD3Q8NAB2 608 aa24.02■■□□□ 1.44
PDLIM2-207ENST00000409417 FZD1Q9UP38 647 aa24.02■■□□□ 1.44
PDLIM2-207ENST00000409417 WDR33Q9C0J8 1336 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms