RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RANBP2P49792 3224 aaKnown RBP21.1■□□□□ 0.97
CHMP3-203ENST00000409225 CACNA1FO60840 1977 aa21.09■□□□□ 0.97
CHMP3-203ENST00000409225 VAMP4O75379 141 aa21.09■□□□□ 0.97
CHMP3-203ENST00000409225 INPP5BP32019 993 aa21.09■□□□□ 0.97
CHMP3-203ENST00000409225 ZDHHC15Q96MV8 337 aa21.09■□□□□ 0.97
CHMP3-203ENST00000409225 ZNF341Q9BYN7 854 aa21.09■□□□□ 0.97
CHMP3-203ENST00000409225 PRO3102Q9H379 93 aa21.09■□□□□ 0.97
CHMP3-203ENST00000409225 ADGRA2Q96PE1 1338 aa21.08■□□□□ 0.97
CHMP3-203ENST00000409225 UBXN2AP68543 259 aa21.08■□□□□ 0.97
CHMP3-203ENST00000409225 APOBEC3HQ6NTF7 200 aaKnown RBP21.08■□□□□ 0.97
CHMP3-203ENST00000409225 ZBTB7BO15156 539 aaPredicted RBP21.07■□□□□ 0.96
CHMP3-203ENST00000409225 FARP2O94887 1054 aaPredicted RBP21.07■□□□□ 0.96
CHMP3-203ENST00000409225 PRKCZQ05513 592 aa21.07■□□□□ 0.96
CHMP3-203ENST00000409225 FKBP1CQ5VVH2 108 aa21.07■□□□□ 0.96
CHMP3-203ENST00000409225 SUCLG2Q96I99 432 aa21.07■□□□□ 0.96
CHMP3-203ENST00000409225 MROH5Q6ZUA9 1318 aa21.06■□□□□ 0.96
CHMP3-203ENST00000409225 CAVIN4Q5BKX8 364 aa21.06■□□□□ 0.96
CHMP3-203ENST00000409225 U2AF1L4Q8WU68 220 aaKnown RBP21.06■□□□□ 0.96
CHMP3-203ENST00000409225 KCNH4Q9UQ05 1017 aa21.06■□□□□ 0.96
CHMP3-203ENST00000409225 RPAP1Q9BWH6 1393 aaPredicted RBP21.06■□□□□ 0.96
CHMP3-203ENST00000409225 EXOSC9Q06265 439 aaKnown RBP21.05■□□□□ 0.96
CHMP3-203ENST00000409225 METTL24Q5JXM2 366 aa21.05■□□□□ 0.96
CHMP3-203ENST00000409225 SLC4A10Q6U841 1118 aa21.05■□□□□ 0.96
CHMP3-203ENST00000409225 UNC93B1Q9H1C4 597 aa21.05■□□□□ 0.96
CHMP3-203ENST00000409225 MAST3O60307 1309 aa21.04■□□□□ 0.96
CHMP3-203ENST00000409225 BCAMP50895 628 aa21.04■□□□□ 0.96
CHMP3-203ENST00000409225 FCGRTP55899 365 aa21.04■□□□□ 0.96
CHMP3-203ENST00000409225 MOGSQ13724 837 aa21.04■□□□□ 0.96
CHMP3-203ENST00000409225 LRRC24Q50LG9 513 aa21.04■□□□□ 0.96
CHMP3-203ENST00000409225 MRIQ9BWK5 157 aa21.04■□□□□ 0.96
CHMP3-203ENST00000409225 GABRQQ9UN88 632 aa21.04■□□□□ 0.96
CHMP3-203ENST00000409225 SOX1O00570 391 aaPredicted RBP21.03■□□□□ 0.96
CHMP3-203ENST00000409225 ALDH1L1O75891 902 aa21.03■□□□□ 0.96
CHMP3-203ENST00000409225 CYP2C8P10632 490 aa21.03■□□□□ 0.96
CHMP3-203ENST00000409225 SLAIN1Q8ND83 568 aa21.03■□□□□ 0.96
CHMP3-203ENST00000409225 KAZALD1Q96I82 304 aa21.03■□□□□ 0.96
CHMP3-203ENST00000409225 PARK7Q99497 189 aaKnown RBP21.03■□□□□ 0.96
CHMP3-203ENST00000409225 SRCIN1Q9C0H9 1055 aa21.03■□□□□ 0.96
CHMP3-203ENST00000409225 EVI5O60447 810 aa21.02■□□□□ 0.96
CHMP3-203ENST00000409225 BCRP11274 1271 aa21.02■□□□□ 0.96
CHMP3-203ENST00000409225 TCP10Q12799 353 aa21.02■□□□□ 0.96
CHMP3-203ENST00000409225 HHIPL2Q6UWX4 724 aa21.02■□□□□ 0.96
CHMP3-203ENST00000409225 FAM151AQ8WW52 585 aa21.02■□□□□ 0.96
CHMP3-203ENST00000409225 LRCH3Q96II8 777 aa21.02■□□□□ 0.96
CHMP3-203ENST00000409225 ZNF112Q9UJU3 913 aa21.02■□□□□ 0.96
CHMP3-203ENST00000409225 ADCY3O60266 1144 aa21.01■□□□□ 0.95
CHMP3-203ENST00000409225 SGPL1O95470 568 aa21.01■□□□□ 0.95
CHMP3-203ENST00000409225 CCDC184Q52MB2 194 aa21.01■□□□□ 0.95
CHMP3-203ENST00000409225 GPAT2Q6NUI2 795 aa21.01■□□□□ 0.95
CHMP3-203ENST00000409225 SUGT1Q9Y2Z0 365 aa21.01■□□□□ 0.95
CHMP3-203ENST00000409225 SALL2Q9Y467 1007 aaPredicted RBP21.01■□□□□ 0.95
CHMP3-203ENST00000409225 A0A1W2PPC1 479 aa21■□□□□ 0.95
CHMP3-203ENST00000409225 NBPF7P0C2Y1 421 aaPredicted RBP21■□□□□ 0.95
CHMP3-203ENST00000409225 NOL9Q5SY16 702 aaKnown RBP21■□□□□ 0.95
CHMP3-203ENST00000409225 BICC1Q9H694 974 aaKnown RBP21■□□□□ 0.95
CHMP3-203ENST00000409225 PDE8BO95263 885 aa20.99■□□□□ 0.95
CHMP3-203ENST00000409225 TFRCP02786 760 aaKnown RBP20.99■□□□□ 0.95
CHMP3-203ENST00000409225 ELNP15502 786 aa20.99■□□□□ 0.95
CHMP3-203ENST00000409225 VGLL2Q8N8G2 317 aa20.99■□□□□ 0.95
CHMP3-203ENST00000409225 STAP2Q9UGK3 403 aa20.99■□□□□ 0.95
CHMP3-203ENST00000409225 MGAMO43451 1857 aa20.98■□□□□ 0.95
CHMP3-203ENST00000409225 AK9Q5TCS8 1911 aa20.98■□□□□ 0.95
CHMP3-203ENST00000409225 CXCL11O14625 94 aa20.98■□□□□ 0.95
CHMP3-203ENST00000409225 INHAP05111 366 aa20.98■□□□□ 0.95
CHMP3-203ENST00000409225 FLT3LGP49771 235 aa20.98■□□□□ 0.95
CHMP3-203ENST00000409225 NFIAQ12857 509 aa20.98■□□□□ 0.95
CHMP3-203ENST00000409225 CDC42EP5Q6NZY7 148 aa20.97■□□□□ 0.95
CHMP3-203ENST00000409225 KLHDC4Q8TBB5 520 aa20.97■□□□□ 0.95
CHMP3-203ENST00000409225 DEFB118Q96PH6 123 aa20.97■□□□□ 0.95
CHMP3-203ENST00000409225 SPINK5Q9NQ38 1064 aaPredicted RBP20.97■□□□□ 0.95
CHMP3-203ENST00000409225 DAGLAQ9Y4D2 1042 aa20.97■□□□□ 0.95
CHMP3-203ENST00000409225 IFIT1P09914 478 aaKnown RBP20.96■□□□□ 0.95
CHMP3-203ENST00000409225 ZEB1P37275 1124 aaPredicted RBP20.96■□□□□ 0.95
CHMP3-203ENST00000409225 DIXDC1Q155Q3 683 aa20.96■□□□□ 0.95
CHMP3-203ENST00000409225 GADL1Q6ZQY3 521 aa20.96■□□□□ 0.95
CHMP3-203ENST00000409225 WDR63Q8IWG1 891 aa20.96■□□□□ 0.95
CHMP3-203ENST00000409225 ANKRD44Q8N8A2 993 aa20.96■□□□□ 0.95
CHMP3-203ENST00000409225 TAOK2Q9UL54 1235 aa20.96■□□□□ 0.95
CHMP3-203ENST00000409225 TNPO2O14787 897 aaKnown RBP20.95■□□□□ 0.94
CHMP3-203ENST00000409225 PUM3Q15397 648 aaKnown RBP20.95■□□□□ 0.94
CHMP3-203ENST00000409225 RABL6Q3YEC7 729 aaPredicted RBP20.95■□□□□ 0.94
CHMP3-203ENST00000409225 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
CHMP3-203ENST00000409225 WDR66Q8TBY9 1149 aa20.95■□□□□ 0.94
CHMP3-203ENST00000409225 FAM198AQ9UFP1 575 aa20.95■□□□□ 0.94
CHMP3-203ENST00000409225 ZHX2Q9Y6X8 837 aa20.95■□□□□ 0.94
CHMP3-203ENST00000409225 COL6A3P12111 3177 aa20.95■□□□□ 0.94
CHMP3-203ENST00000409225 A0A0G2JLL6 359 aaPredicted RBP20.94■□□□□ 0.94
CHMP3-203ENST00000409225 FASTKD5Q7L8L6 764 aaKnown RBP20.94■□□□□ 0.94
CHMP3-203ENST00000409225 PRRT2Q7Z6L0 340 aaPredicted RBP20.94■□□□□ 0.94
CHMP3-203ENST00000409225 PXYLP1Q8TE99 480 aa20.94■□□□□ 0.94
CHMP3-203ENST00000409225 PAWRQ96IZ0 340 aaKnown RBP20.94■□□□□ 0.94
CHMP3-203ENST00000409225 USP40Q9NVE5 1235 aa20.94■□□□□ 0.94
CHMP3-203ENST00000409225 UTYO14607 1347 aa20.94■□□□□ 0.94
CHMP3-203ENST00000409225 KIF16BQ96L93 1317 aa20.94■□□□□ 0.94
CHMP3-203ENST00000409225 FGFR2P21802 821 aa20.93■□□□□ 0.94
CHMP3-203ENST00000409225 ZFPM1Q8IX07 1006 aa20.93■□□□□ 0.94
CHMP3-203ENST00000409225 PICK1Q9NRD5 415 aa20.93■□□□□ 0.94
CHMP3-203ENST00000409225 LAMA3Q16787 3333 aa20.92■□□□□ 0.94
CHMP3-203ENST00000409225 PRDX5P30044 214 aa20.92■□□□□ 0.94
CHMP3-203ENST00000409225 IRF5Q13568 498 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms