RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 PYCARDQ9ULZ3 195 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 SPTLC2O15270 562 aa19.59■□□□□ 0.73
NUP50-203ENST00000407019 MARCH10Q8NA82 808 aaPredicted RBP19.59■□□□□ 0.73
NUP50-203ENST00000407019 IGDCC4Q8TDY8 1250 aa19.59■□□□□ 0.73
NUP50-203ENST00000407019 ALG1Q9BT22 464 aa19.59■□□□□ 0.73
NUP50-203ENST00000407019 ARMT1Q9H993 441 aa19.59■□□□□ 0.73
NUP50-203ENST00000407019 NIP7Q9Y221 180 aaKnown RBP eCLIP19.59■□□□□ 0.73
NUP50-203ENST00000407019 LAMB2P55268 1798 aa19.59■□□□□ 0.73
NUP50-203ENST00000407019 ZBTB43O43298 467 aa19.58■□□□□ 0.73
NUP50-203ENST00000407019 NFXL1Q6ZNB6 911 aa19.58■□□□□ 0.73
NUP50-203ENST00000407019 SGMS1Q86VZ5 419 aa19.58■□□□□ 0.73
NUP50-203ENST00000407019 LY9Q9HBG7 655 aa19.58■□□□□ 0.73
NUP50-203ENST00000407019 TIAM2Q8IVF5 1701 aa19.58■□□□□ 0.72
NUP50-203ENST00000407019 A0A1B0GVL5 298 aa19.58■□□□□ 0.72
NUP50-203ENST00000407019 RXRAP19793 462 aa19.58■□□□□ 0.72
NUP50-203ENST00000407019 CDC25BP30305 580 aa19.58■□□□□ 0.72
NUP50-203ENST00000407019 TMEM67Q5HYA8 995 aa19.58■□□□□ 0.72
NUP50-203ENST00000407019 ANO1Q5XXA6 986 aa19.58■□□□□ 0.72
NUP50-203ENST00000407019 SARM1Q6SZW1 724 aa19.58■□□□□ 0.72
NUP50-203ENST00000407019 MICU3Q86XE3 530 aa19.58■□□□□ 0.72
NUP50-203ENST00000407019 CNNM2Q9H8M5 875 aa19.58■□□□□ 0.72
NUP50-203ENST00000407019 SENP2Q9HC62 589 aa19.58■□□□□ 0.72
NUP50-203ENST00000407019 GOLGA8AA7E2F4 631 aa19.57■□□□□ 0.72
NUP50-203ENST00000407019 CDC27P30260 824 aa19.57■□□□□ 0.72
NUP50-203ENST00000407019 NDUFA8P51970 172 aa19.57■□□□□ 0.72
NUP50-203ENST00000407019 HSP90AA2PQ14568 343 aaPredicted RBP19.57■□□□□ 0.72
NUP50-203ENST00000407019 CCDC186Q7Z3E2 898 aa19.57■□□□□ 0.72
NUP50-203ENST00000407019 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.56■□□□□ 0.72
NUP50-203ENST00000407019 GNAT2P19087 354 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 LIFRP42702 1097 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 BCAMP50895 628 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 CTDSPL2Q05D32 466 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 SDF4Q9BRK5 362 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 KRT23Q9C075 422 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 PNPLA7Q6ZV29 1317 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 GSG1L2A8MUP6 293 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 CHRNDQ07001 517 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 AKNAD1Q5T1N1 836 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 CEP57L1Q8IYX8 460 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 PRIMPOLQ96LW4 560 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 AIFM3Q96NN9 605 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 NACAP1Q9BZK3 213 aa19.56■□□□□ 0.72
NUP50-203ENST00000407019 BECN2A8MW95 431 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 DYNC1I1O14576 645 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 IARSP41252 1262 aaKnown RBP19.55■□□□□ 0.72
NUP50-203ENST00000407019 KRT40Q6A162 431 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 INCENPQ9NQS7 918 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 ZSWIM5Q9P217 1185 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 CLIP2Q9UDT6 1046 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 ZNF652Q9Y2D9 606 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 IFIT3O14879 490 aaKnown RBP19.55■□□□□ 0.72
NUP50-203ENST00000407019 MFSD6Q6ZSS7 791 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 VPS37DQ86XT2 251 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 CCDC144CPQ8IYA2 1237 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 LCORLQ8N3X6 602 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 PHKBQ93100 1093 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 NAT10Q9H0A0 1025 aaKnown RBP19.55■□□□□ 0.72
NUP50-203ENST00000407019 SLC12A7Q9Y666 1083 aa19.55■□□□□ 0.72
NUP50-203ENST00000407019 SPATA31A5Q5VU36 1347 aa19.54■□□□□ 0.72
NUP50-203ENST00000407019 SPATA31A7Q8IWB4 1347 aa19.54■□□□□ 0.72
NUP50-203ENST00000407019 CCDC69A6NI79 296 aa19.54■□□□□ 0.72
NUP50-203ENST00000407019 TDO2P48775 406 aa19.54■□□□□ 0.72
NUP50-203ENST00000407019 NTRK3Q16288 839 aa19.54■□□□□ 0.72
NUP50-203ENST00000407019 DHX40Q8IX18 779 aaKnown RBP19.54■□□□□ 0.72
NUP50-203ENST00000407019 SMARCC1Q92922 1105 aaPredicted RBP19.54■□□□□ 0.72
NUP50-203ENST00000407019 CDC5LQ99459 802 aaKnown RBP19.54■□□□□ 0.72
NUP50-203ENST00000407019 NRBP1Q9UHY1 535 aa19.54■□□□□ 0.72
NUP50-203ENST00000407019 SLC4A4Q9Y6R1 1079 aa19.54■□□□□ 0.72
NUP50-203ENST00000407019 STK36Q9NRP7 1315 aa19.54■□□□□ 0.72
NUP50-203ENST00000407019 PRKAB2O43741 272 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 RANBP6O60518 1105 aaKnown RBP19.53■□□□□ 0.72
NUP50-203ENST00000407019 GNL2Q13823 731 aaKnown RBP19.53■□□□□ 0.72
NUP50-203ENST00000407019 TRIM29Q14134 588 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 MYRIPQ8NFW9 859 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 STAG1Q8WVM7 1258 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 MRFAP1L1Q96HT8 127 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 MYL10Q9BUA6 226 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 LRP2BPQ9P2M1 347 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 TACC3Q9Y6A5 838 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 MYH14Q7Z406 1995 aaKnown RBP19.53■□□□□ 0.72
NUP50-203ENST00000407019 BCL9LQ86UU0 1499 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 CMA1P23946 247 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 SLC39A14Q15043 492 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 AXDND1Q5T1B0 1012 aaPredicted RBP19.53■□□□□ 0.72
NUP50-203ENST00000407019 FAM217BQ9NTX9 383 aaPredicted RBP19.53■□□□□ 0.72
NUP50-203ENST00000407019 NID2Q14112 1375 aa19.53■□□□□ 0.72
NUP50-203ENST00000407019 ECM29Q5VYK3 1845 aa19.52■□□□□ 0.72
NUP50-203ENST00000407019 CHD4Q14839 1912 aa19.52■□□□□ 0.72
NUP50-203ENST00000407019 A0A087WWV3 80 aa19.52■□□□□ 0.72
NUP50-203ENST00000407019 ERCC4Q92889 916 aaPredicted RBP19.52■□□□□ 0.72
NUP50-203ENST00000407019 KIAA1468Q9P260 1216 aa19.52■□□□□ 0.72
NUP50-203ENST00000407019 BCORQ6W2J9 1755 aa19.52■□□□□ 0.71
NUP50-203ENST00000407019 SSRP1Q08945 709 aaKnown RBP19.52■□□□□ 0.71
NUP50-203ENST00000407019 ZRSR1Q15695 479 aaKnown RBP19.52■□□□□ 0.71
NUP50-203ENST00000407019 BARGINQ6ZT62 677 aa19.52■□□□□ 0.71
NUP50-203ENST00000407019 ZNF202O95125 648 aa19.51■□□□□ 0.71
NUP50-203ENST00000407019 PFKFB1P16118 471 aa19.51■□□□□ 0.71
NUP50-203ENST00000407019 SART3Q15020 963 aaKnown RBP19.51■□□□□ 0.71
NUP50-203ENST00000407019 RRP12Q5JTH9 1297 aaKnown RBP19.51■□□□□ 0.71
NUP50-203ENST00000407019 AOPEPQ8N6M6 819 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms