RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 U3KPZ7 1027 aaPredicted RBP24.49■■□□□ 1.51
CHKB-201ENST00000406938 HSPA4P34932 840 aa24.48■■□□□ 1.51
CHKB-201ENST00000406938 PPP4CP60510 307 aa24.48■■□□□ 1.51
CHKB-201ENST00000406938 HDLBPQ00341 1268 aaKnown RBP24.48■■□□□ 1.51
CHKB-201ENST00000406938 SERPINA10Q9UK55 444 aa24.48■■□□□ 1.51
CHKB-201ENST00000406938 APPP05067 770 aa24.47■■□□□ 1.51
CHKB-201ENST00000406938 C9orf131Q5VYM1 1079 aa24.47■■□□□ 1.51
CHKB-201ENST00000406938 SDR42E1Q8WUS8 393 aa24.47■■□□□ 1.51
CHKB-201ENST00000406938 MRIQ9BWK5 157 aa24.47■■□□□ 1.51
CHKB-201ENST00000406938 EPB41L4AQ9HCS5 686 aaPredicted RBP24.47■■□□□ 1.51
CHKB-201ENST00000406938 GSG1L2A8MUP6 293 aa24.46■■□□□ 1.51
CHKB-201ENST00000406938 PATL2C9JE40 543 aaKnown RBP24.46■■□□□ 1.51
CHKB-201ENST00000406938 NECTIN1Q15223 517 aa24.46■■□□□ 1.51
CHKB-201ENST00000406938 CERS3Q8IU89 383 aa24.46■■□□□ 1.51
CHKB-201ENST00000406938 SH3RF3Q8TEJ3 882 aaPredicted RBP24.46■■□□□ 1.51
CHKB-201ENST00000406938 ZDHHC15Q96MV8 337 aa24.46■■□□□ 1.51
CHKB-201ENST00000406938 CRNKL1Q9BZJ0 848 aaKnown RBP24.46■■□□□ 1.51
CHKB-201ENST00000406938 PALD1Q9ULE6 856 aa24.46■■□□□ 1.51
CHKB-201ENST00000406938 GJA3Q9Y6H8 435 aa24.46■■□□□ 1.51
CHKB-201ENST00000406938 RPS12P25398 132 aaKnown RBP24.46■■□□□ 1.51
CHKB-201ENST00000406938 HDAC9Q9UKV0 1011 aa24.46■■□□□ 1.51
CHKB-201ENST00000406938 USP17L8P0C7I0 530 aa24.45■■□□□ 1.5
CHKB-201ENST00000406938 PLCG2P16885 1265 aa24.45■■□□□ 1.5
CHKB-201ENST00000406938 RBM5P52756 815 aaKnown RBP eCLIP24.45■■□□□ 1.5
CHKB-201ENST00000406938 RHBDL3P58872 404 aa24.45■■□□□ 1.5
CHKB-201ENST00000406938 OGFOD1Q8N543 542 aa24.45■■□□□ 1.5
CHKB-201ENST00000406938 PCDHAC2Q9Y5I4 1007 aa24.45■■□□□ 1.5
CHKB-201ENST00000406938 RPAP1Q9BWH6 1393 aaPredicted RBP24.45■■□□□ 1.5
CHKB-201ENST00000406938 FGAP02671 866 aa24.44■■□□□ 1.5
CHKB-201ENST00000406938 CREB3L3Q68CJ9 461 aa24.44■■□□□ 1.5
CHKB-201ENST00000406938 APOBEC3HQ6NTF7 200 aaKnown RBP24.44■■□□□ 1.5
CHKB-201ENST00000406938 ZMYM6O95789 1325 aa24.44■■□□□ 1.5
CHKB-201ENST00000406938 SLC27A2O14975 620 aa24.43■■□□□ 1.5
CHKB-201ENST00000406938 GMPSP49915 693 aaPredicted RBP24.43■■□□□ 1.5
CHKB-201ENST00000406938 CFAP100Q494V2 611 aa24.43■■□□□ 1.5
CHKB-201ENST00000406938 IFNL3Q8IZI9 196 aa24.43■■□□□ 1.5
CHKB-201ENST00000406938 NACAP1Q9BZK3 213 aa24.43■■□□□ 1.5
CHKB-201ENST00000406938 NAPBQ9H115 298 aa24.43■■□□□ 1.5
CHKB-201ENST00000406938 CTNNA3Q9UI47 895 aa24.43■■□□□ 1.5
CHKB-201ENST00000406938 RBM19Q9Y4C8 960 aaKnown RBP24.43■■□□□ 1.5
CHKB-201ENST00000406938 TDO2P48775 406 aa24.42■■□□□ 1.5
CHKB-201ENST00000406938 ALX1Q15699 326 aa24.42■■□□□ 1.5
CHKB-201ENST00000406938 RNF20Q5VTR2 975 aa24.42■■□□□ 1.5
CHKB-201ENST00000406938 TEX11Q8IYF3 940 aa24.42■■□□□ 1.5
CHKB-201ENST00000406938 RASEFQ8IZ41 740 aa24.42■■□□□ 1.5
CHKB-201ENST00000406938 GPC2Q8N158 579 aa24.42■■□□□ 1.5
CHKB-201ENST00000406938 SHTN1A0MZ66 631 aa24.41■■□□□ 1.5
CHKB-201ENST00000406938 CYP21A2P08686 494 aa24.41■■□□□ 1.5
CHKB-201ENST00000406938 ANAPC15P60006 121 aa24.41■■□□□ 1.5
CHKB-201ENST00000406938 CDC42EP5Q6NZY7 148 aa24.41■■□□□ 1.5
CHKB-201ENST00000406938 DPF2Q92785 391 aa24.41■■□□□ 1.5
CHKB-201ENST00000406938 KCNB2Q92953 911 aa24.41■■□□□ 1.5
CHKB-201ENST00000406938 KIF2CQ99661 725 aa24.41■■□□□ 1.5
CHKB-201ENST00000406938 DCP1AQ9NPI6 582 aaPredicted RBP24.41■■□□□ 1.5
CHKB-201ENST00000406938 ATP8A2Q9NTI2 1148 aa24.41■■□□□ 1.5
CHKB-201ENST00000406938 SNX14Q9Y5W7 946 aa24.41■■□□□ 1.5
CHKB-201ENST00000406938 USP5P45974 858 aa24.4■■□□□ 1.5
CHKB-201ENST00000406938 USP40Q9NVE5 1235 aa24.4■■□□□ 1.5
CHKB-201ENST00000406938 TAF6LQ9Y6J9 622 aa24.4■■□□□ 1.5
CHKB-201ENST00000406938 ZKSCAN1P17029 563 aaPredicted RBP24.39■■□□□ 1.5
CHKB-201ENST00000406938 GIMAP6Q6P9H5 292 aa24.39■■□□□ 1.5
CHKB-201ENST00000406938 MICALL2Q8IY33 904 aa24.39■■□□□ 1.5
CHKB-201ENST00000406938 TGFBRAP1Q8WUH2 860 aa24.39■■□□□ 1.5
CHKB-201ENST00000406938 SPDYE2BA6NHP3 402 aa24.39■■□□□ 1.49
CHKB-201ENST00000406938 SPDYE6P0CI01 402 aa24.39■■□□□ 1.49
CHKB-201ENST00000406938 ZNF280AP59817 542 aaPredicted RBP24.39■■□□□ 1.49
CHKB-201ENST00000406938 HAND2P61296 217 aa24.39■■□□□ 1.49
CHKB-201ENST00000406938 DLGAP5Q15398 846 aa24.39■■□□□ 1.49
CHKB-201ENST00000406938 IMMTQ16891 758 aaKnown RBP24.39■■□□□ 1.49
CHKB-201ENST00000406938 DDRGK1Q96HY6 314 aa24.39■■□□□ 1.49
CHKB-201ENST00000406938 FLT1P17948 1338 aa24.38■■□□□ 1.49
CHKB-201ENST00000406938 MMP14P50281 582 aa24.38■■□□□ 1.49
CHKB-201ENST00000406938 MAPKAPK5Q8IW41 473 aa24.38■■□□□ 1.49
CHKB-201ENST00000406938 IL17RAQ96F46 866 aa24.38■■□□□ 1.49
CHKB-201ENST00000406938 PRMT6Q96LA8 375 aaPredicted RBP24.38■■□□□ 1.49
CHKB-201ENST00000406938 MYOZ2Q9NPC6 264 aa24.38■■□□□ 1.49
CHKB-201ENST00000406938 MKRN1Q9UHC7 482 aaKnown RBP24.38■■□□□ 1.49
CHKB-201ENST00000406938 CDK5RAP2Q96SN8 1893 aa24.38■■□□□ 1.49
CHKB-201ENST00000406938 NAV1Q8NEY1 1877 aa24.37■■□□□ 1.49
CHKB-201ENST00000406938 LAMA4Q16363 1823 aa24.37■■□□□ 1.49
CHKB-201ENST00000406938 WDHD1O75717 1129 aaPredicted RBP24.37■■□□□ 1.49
CHKB-201ENST00000406938 MTMR14Q8NCE2 650 aa24.37■■□□□ 1.49
CHKB-201ENST00000406938 CNOT7Q9UIV1 285 aaKnown RBP24.37■■□□□ 1.49
CHKB-201ENST00000406938 ZC3H4Q9UPT8 1303 aaKnown RBP24.36■■□□□ 1.49
CHKB-201ENST00000406938 DDX60LQ5H9U9 1706 aaKnown RBP24.36■■□□□ 1.49
CHKB-201ENST00000406938 ZNF213O14771 459 aa24.36■■□□□ 1.49
CHKB-201ENST00000406938 DDNO94850 711 aaPredicted RBP24.36■■□□□ 1.49
CHKB-201ENST00000406938 TDRD3Q9H7E2 651 aaKnown RBP24.36■■□□□ 1.49
CHKB-201ENST00000406938 FOCADQ5VW36 1801 aa24.36■■□□□ 1.49
CHKB-201ENST00000406938 ECM29Q5VYK3 1845 aa24.35■■□□□ 1.49
CHKB-201ENST00000406938 PICALMQ13492 652 aa24.35■■□□□ 1.49
CHKB-201ENST00000406938 TSGA10IPQ3SY00 556 aa24.35■■□□□ 1.49
CHKB-201ENST00000406938 CTR9Q6PD62 1173 aa24.35■■□□□ 1.49
CHKB-201ENST00000406938 NBPF3Q9H094 633 aa24.35■■□□□ 1.49
CHKB-201ENST00000406938 DDX4Q9NQI0 724 aaKnown RBP24.35■■□□□ 1.49
CHKB-201ENST00000406938 MCM9Q9NXL9 1143 aa24.35■■□□□ 1.49
CHKB-201ENST00000406938 BAZ2AQ9UIF9 1905 aaKnown RBP24.35■■□□□ 1.49
CHKB-201ENST00000406938 CACNB3P54284 484 aa24.35■■□□□ 1.49
CHKB-201ENST00000406938 ADCK5Q3MIX3 580 aa24.35■■□□□ 1.49
CHKB-201ENST00000406938 ZBED3Q96IU2 234 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms