RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 ALX1Q15699 326 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 KRT40Q6A162 431 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 APOA5Q6Q788 366 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 BRINP3Q76B58 766 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 TMC6Q7Z403 805 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 VGLL2Q8N8G2 317 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
CLIP4-204ENST00000404424 CNNM1Q9NRU3 951 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 ARID4AP29374 1257 aaPredicted RBP12.41□□□□□ -0.42
CLIP4-204ENST00000404424 CTSWP56202 376 aa12.41□□□□□ -0.42
CLIP4-204ENST00000404424 GNL2Q13823 731 aaKnown RBP12.41□□□□□ -0.42
CLIP4-204ENST00000404424 CYB5R4Q7L1T6 521 aa12.41□□□□□ -0.42
CLIP4-204ENST00000404424 SGMS1Q86VZ5 419 aa12.41□□□□□ -0.42
CLIP4-204ENST00000404424 NLRP10Q86W26 655 aa12.41□□□□□ -0.42
CLIP4-204ENST00000404424 RAB11FIP4Q86YS3 637 aa12.41□□□□□ -0.42
CLIP4-204ENST00000404424 TBC1D10CQ8IV04 446 aa12.41□□□□□ -0.42
CLIP4-204ENST00000404424 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
CLIP4-204ENST00000404424 GJB4Q9NTQ9 266 aa12.41□□□□□ -0.42
CLIP4-204ENST00000404424 TRMT1Q9NXH9 659 aaKnown RBP12.41□□□□□ -0.42
CLIP4-204ENST00000404424 CCP110O43303 1012 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 CBFA2T2O43439 604 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 PDE8BO95263 885 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 APPP05067 770 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 TRIM29Q14134 588 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 PTPAQ15257 358 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 ELOA2Q8IYF1 753 aaPredicted RBP12.4□□□□□ -0.42
CLIP4-204ENST00000404424 GREM2Q9H772 168 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 MROH7-TTC4A0A0A0MT08 1334 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 STK36Q9NRP7 1315 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 BIN1O00499 593 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 ZBTB43O43298 467 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 MARCKSP29966 332 aaPredicted RBP12.4□□□□□ -0.42
CLIP4-204ENST00000404424 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
CLIP4-204ENST00000404424 LIFRP42702 1097 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 FANCCQ00597 558 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 RESP18Q5W5W9 173 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 E4F1Q66K89 784 aaPredicted RBP12.4□□□□□ -0.42
CLIP4-204ENST00000404424 ARMCX5Q6P1M9 558 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 IGDCC4Q8TDY8 1250 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 SOS2Q07890 1332 aaPredicted RBP12.4□□□□□ -0.42
CLIP4-204ENST00000404424 ZNF532Q9HCE3 1301 aa12.4□□□□□ -0.42
CLIP4-204ENST00000404424 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 CUTAO60888 179 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 IDH1O75874 414 aaKnown RBP12.39□□□□□ -0.43
CLIP4-204ENST00000404424 SLU7O95391 586 aaKnown RBP12.39□□□□□ -0.43
CLIP4-204ENST00000404424 NTRK3Q16288 839 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 ZNF397Q8NF99 534 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-204ENST00000404424 MAP3K14Q99558 947 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 PIH1D3Q9NQM4 214 aaKnown RBP12.39□□□□□ -0.43
CLIP4-204ENST00000404424 PRDM10Q9NQV6 1147 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 ZNF215Q9UL58 517 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-204ENST00000404424 PDE6AP16499 860 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 CDC27P30260 824 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 MYL5Q02045 173 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 CCDC102BQ68D86 513 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 SHC4Q6S5L8 630 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 WASF1Q92558 559 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 AIDAQ96BJ3 306 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 STRBPQ96SI9 672 aaKnown RBP12.39□□□□□ -0.43
CLIP4-204ENST00000404424 DDX41Q9UJV9 622 aaKnown RBP12.39□□□□□ -0.43
CLIP4-204ENST00000404424 TOGARAM1Q9Y4F4 1720 aa12.39□□□□□ -0.43
CLIP4-204ENST00000404424 TCRBV5S4A2TA0A5A2 114 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 GOLGA8AA7E2F4 631 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 B4E1Z4 1266 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 PATL2C9JE40 543 aaKnown RBP12.38□□□□□ -0.43
CLIP4-204ENST00000404424 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
CLIP4-204ENST00000404424 PDE8AO60658 829 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 EVA1CP58658 441 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 OLFM4Q6UX06 510 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 NFXL1Q6ZNB6 911 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 PIGBQ92521 554 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 LPIN2Q92539 896 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 PPP1R13BQ96KQ4 1090 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 AIFM3Q96NN9 605 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLIP4-204ENST00000404424 CNNM2Q9H8M5 875 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 L2HGDHQ9H9P8 463 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 LY9Q9HBG7 655 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 ASAP1Q9ULH1 1129 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 NAA30Q147X3 362 aaPredicted RBP12.38□□□□□ -0.43
CLIP4-204ENST00000404424 HLFQ16534 295 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 MICU3Q86XE3 530 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 DENND2AQ9ULE3 1009 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 NID2Q14112 1375 aa12.38□□□□□ -0.43
CLIP4-204ENST00000404424 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
CLIP4-204ENST00000404424 UBASH3AP57075 661 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 SSRP1Q08945 709 aaKnown RBP12.37□□□□□ -0.43
CLIP4-204ENST00000404424 PUM3Q15397 648 aaKnown RBP12.37□□□□□ -0.43
CLIP4-204ENST00000404424 TMEM67Q5HYA8 995 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 SYNE4Q8N205 404 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 PHKBQ93100 1093 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 HSD3B7Q9H2F3 369 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 HOOK1Q9UJC3 728 aaKnown RBP12.37□□□□□ -0.43
CLIP4-204ENST00000404424 MORC2Q9Y6X9 1032 aaPredicted RBP12.37□□□□□ -0.43
CLIP4-204ENST00000404424 MROH5Q6ZUA9 1318 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 GPTP24298 496 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 PHKA1P46020 1223 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 KRBA2Q6ZNG9 492 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 AK7Q96M32 723 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 MTA3Q9BTC8 594 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms