RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 SPTY2D1Q68D10 685 aaPredicted RBP16.41■□□□□ 0.22
SDF4-203ENST00000403997 DZIP1Q86YF9 867 aaKnown RBP16.41■□□□□ 0.22
SDF4-203ENST00000403997 USP40Q9NVE5 1235 aa16.41■□□□□ 0.22
SDF4-203ENST00000403997 INHBEP58166 350 aa16.4■□□□□ 0.22
SDF4-203ENST00000403997 TCP10Q12799 353 aa16.4■□□□□ 0.22
SDF4-203ENST00000403997 DGKZQ13574 1117 aa16.4■□□□□ 0.22
SDF4-203ENST00000403997 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
SDF4-203ENST00000403997 ELP3Q9H9T3 547 aa16.4■□□□□ 0.22
SDF4-203ENST00000403997 PDS5AQ29RF7 1337 aaKnown RBP16.4■□□□□ 0.22
SDF4-203ENST00000403997 GJA5P36382 358 aa16.39■□□□□ 0.21
SDF4-203ENST00000403997 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.39■□□□□ 0.21
SDF4-203ENST00000403997 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
SDF4-203ENST00000403997 SLF2Q8IX21 1173 aa16.39■□□□□ 0.21
SDF4-203ENST00000403997 SPATA5Q8NB90 893 aa16.39■□□□□ 0.21
SDF4-203ENST00000403997 FAM151AQ8WW52 585 aa16.39■□□□□ 0.21
SDF4-203ENST00000403997 MCOLN1Q9GZU1 580 aa16.39■□□□□ 0.21
SDF4-203ENST00000403997 HMG20BQ9P0W2 317 aa16.39■□□□□ 0.21
SDF4-203ENST00000403997 RCAN3Q9UKA8 241 aa16.39■□□□□ 0.21
SDF4-203ENST00000403997 CSADQ9Y600 493 aa16.39■□□□□ 0.21
SDF4-203ENST00000403997 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
SDF4-203ENST00000403997 TNNI3KQ59H18 835 aa16.38■□□□□ 0.21
SDF4-203ENST00000403997 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.38■□□□□ 0.21
SDF4-203ENST00000403997 OPTNQ96CV9 577 aa16.38■□□□□ 0.21
SDF4-203ENST00000403997 GPR108Q9NPR9 543 aa16.38■□□□□ 0.21
SDF4-203ENST00000403997 NOP58Q9Y2X3 529 aaKnown RBP16.38■□□□□ 0.21
SDF4-203ENST00000403997 FPGT-TNNI3KV9GXZ4 949 aa16.38■□□□□ 0.21
SDF4-203ENST00000403997 CCDC85CA6NKD9 419 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 ALDH1A1P00352 501 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 ARID4AP29374 1257 aaPredicted RBP16.37■□□□□ 0.21
SDF4-203ENST00000403997 NFIAQ12857 509 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 VGLL4Q14135 290 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 CCDC158Q5M9N0 1113 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 DCAF15Q66K64 600 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 CEP85Q6P2H3 762 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 PI16Q6UXB8 463 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 TBC1D9Q6ZT07 1266 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 MIGA2Q7L4E1 593 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 IFNL1Q8IU54 200 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 FAM163AQ96GL9 167 aaPredicted RBP16.37■□□□□ 0.21
SDF4-203ENST00000403997 WRNIP1Q96S55 665 aa16.37■□□□□ 0.21
SDF4-203ENST00000403997 MECOMQ03112 1051 aa16.36■□□□□ 0.21
SDF4-203ENST00000403997 TTC39AQ5SRH9 613 aa16.36■□□□□ 0.21
SDF4-203ENST00000403997 OTUD7BQ6GQQ9 843 aa16.36■□□□□ 0.21
SDF4-203ENST00000403997 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
SDF4-203ENST00000403997 DBNDD2Q9BQY9 259 aa16.36■□□□□ 0.21
SDF4-203ENST00000403997 FAM198AQ9UFP1 575 aa16.36■□□□□ 0.21
SDF4-203ENST00000403997 COG6Q9Y2V7 657 aa16.36■□□□□ 0.21
SDF4-203ENST00000403997 GAKO14976 1311 aa16.36■□□□□ 0.21
SDF4-203ENST00000403997 GPR25O00155 361 aa16.35■□□□□ 0.21
SDF4-203ENST00000403997 MCAMP43121 646 aa16.35■□□□□ 0.21
SDF4-203ENST00000403997 BTDP43251 543 aa16.35■□□□□ 0.21
SDF4-203ENST00000403997 ZNF296Q8WUU4 475 aaPredicted RBP16.35■□□□□ 0.21
SDF4-203ENST00000403997 ZKSCAN4Q969J2 545 aaPredicted RBP16.35■□□□□ 0.21
SDF4-203ENST00000403997 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
SDF4-203ENST00000403997 ZNF341Q9BYN7 854 aa16.35■□□□□ 0.21
SDF4-203ENST00000403997 R3HDMLQ9H3Y0 253 aa16.35■□□□□ 0.21
SDF4-203ENST00000403997 SNRKQ9NRH2 765 aa16.35■□□□□ 0.21
SDF4-203ENST00000403997 RAI14Q9P0K7 980 aa16.35■□□□□ 0.21
SDF4-203ENST00000403997 LRP2BPQ9P2M1 347 aa16.35■□□□□ 0.21
SDF4-203ENST00000403997 IGF2BP3O00425 579 aaKnown RBP eCLIP16.34■□□□□ 0.21
SDF4-203ENST00000403997 LDHCP07864 332 aa16.34■□□□□ 0.21
SDF4-203ENST00000403997 RGS3P49796 1198 aa16.34■□□□□ 0.21
SDF4-203ENST00000403997 GSTO1P78417 241 aa16.34■□□□□ 0.21
SDF4-203ENST00000403997 CTU1Q7Z7A3 348 aaKnown RBP16.34■□□□□ 0.21
SDF4-203ENST00000403997 ZSCAN29Q8IWY8 852 aaPredicted RBP16.34■□□□□ 0.21
SDF4-203ENST00000403997 ZFPM1Q8IX07 1006 aa16.34■□□□□ 0.21
SDF4-203ENST00000403997 CFHR5Q9BXR6 569 aa16.34■□□□□ 0.21
SDF4-203ENST00000403997 IDI2Q9BXS1 227 aa16.34■□□□□ 0.21
SDF4-203ENST00000403997 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
SDF4-203ENST00000403997 DDX19BQ9UMR2 479 aa16.34■□□□□ 0.21
SDF4-203ENST00000403997 MROH7-TTC4A0A0A0MT08 1334 aa16.34■□□□□ 0.21
SDF4-203ENST00000403997 RPAP1Q9BWH6 1393 aaPredicted RBP16.34■□□□□ 0.21
SDF4-203ENST00000403997 MYH2Q9UKX2 1941 aa16.33■□□□□ 0.21
SDF4-203ENST00000403997 GPR75-ASB3A0A0A6YYF3 556 aa16.33■□□□□ 0.2
SDF4-203ENST00000403997 ENTPD3O75355 529 aa16.33■□□□□ 0.2
SDF4-203ENST00000403997 GTF2A2P52657 109 aa16.33■□□□□ 0.2
SDF4-203ENST00000403997 NOM1Q5C9Z4 860 aaKnown RBP16.33■□□□□ 0.2
SDF4-203ENST00000403997 ZNF384Q8TF68 577 aa16.33■□□□□ 0.2
SDF4-203ENST00000403997 NSUN4Q96CB9 384 aaKnown RBP16.33■□□□□ 0.2
SDF4-203ENST00000403997 MS4A4AQ96JQ5 239 aa16.33■□□□□ 0.2
SDF4-203ENST00000403997 EXOC6BQ9Y2D4 811 aa16.33■□□□□ 0.2
SDF4-203ENST00000403997 SNCAIPQ9Y6H5 919 aa16.33■□□□□ 0.2
SDF4-203ENST00000403997 AK9Q5TCS8 1911 aa16.33■□□□□ 0.2
SDF4-203ENST00000403997 TESPA1A2RU30 521 aaPredicted RBP16.32■□□□□ 0.2
SDF4-203ENST00000403997 SPDYE5A6NIY4 337 aa16.32■□□□□ 0.2
SDF4-203ENST00000403997 FKTNO75072 461 aa16.32■□□□□ 0.2
SDF4-203ENST00000403997 INPP5BP32019 993 aa16.32■□□□□ 0.2
SDF4-203ENST00000403997 PICALMQ13492 652 aa16.32■□□□□ 0.2
SDF4-203ENST00000403997 ERO1BQ86YB8 467 aa16.32■□□□□ 0.2
SDF4-203ENST00000403997 ERC1Q8IUD2 1116 aa16.32■□□□□ 0.2
SDF4-203ENST00000403997 EAF2Q96CJ1 260 aaPredicted RBP16.32■□□□□ 0.2
SDF4-203ENST00000403997 PTPN18Q99952 460 aa16.32■□□□□ 0.2
SDF4-203ENST00000403997 CHMP4BQ9H444 224 aaKnown RBP16.32■□□□□ 0.2
SDF4-203ENST00000403997 CCL15-CCL14A0A0B4J2E2 113 aa16.31■□□□□ 0.2
SDF4-203ENST00000403997 WDHD1O75717 1129 aaPredicted RBP16.31■□□□□ 0.2
SDF4-203ENST00000403997 CCL15Q16663 113 aa16.31■□□□□ 0.2
SDF4-203ENST00000403997 HSP90AB4PQ58FF6 505 aa16.31■□□□□ 0.2
SDF4-203ENST00000403997 RPAP2Q8IXW5 612 aaPredicted RBP16.31■□□□□ 0.2
SDF4-203ENST00000403997 BRI3BPQ8WY22 251 aa16.31■□□□□ 0.2
SDF4-203ENST00000403997 DDX4Q9NQI0 724 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms