RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 MCCP23508 829 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 LMOD3Q0VAK6 560 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 RASA3Q14644 834 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 SYCP2LQ5T4T6 812 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 ALG1LQ6GMV1 187 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 HS2ST1Q7LGA3 356 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 AMOTL1Q8IY63 956 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 ANKRD24Q8TF21 1146 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 RELTQ969Z4 430 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 ZNF512BQ96KM6 892 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 DEPDC7Q96QD5 511 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 APBA2Q99767 749 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 CFHR5Q9BXR6 569 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 TMX4Q9H1E5 349 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 PNMA3Q9UL41 463 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 KNSTRNQ9Y448 316 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 FLT4P35916 1363 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 RGPD3A6NKT7 1758 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 RGPD4Q7Z3J3 1758 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 NCAPD2Q15021 1401 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 NR1I2O75469 434 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 AMPHP49418 695 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 CDKN1CP49918 316 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 RRS1Q15050 365 aaKnown RBP6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 WDR78Q5VTH9 848 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 ANKS3Q6ZW76 656 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 KIAA0907Q7Z7F0 614 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 TSEN2Q8NCE0 465 aaKnown RBP6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 ZNF516Q92618 1163 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 APPBP2Q92624 585 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 COL26A1Q96A83 441 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 ALKBH8Q96BT7 664 aaKnown RBP6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 NIF3L1Q9GZT8 377 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 TMX1Q9H3N1 280 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 CHST12Q9NRB3 414 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 CNTN3Q9P232 1028 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 POLKQ9UBT6 870 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 AK5Q9Y6K8 562 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 PKD1L3Q7Z443 1732 aa6.75□□□□□ -1.33
HMGB3P7-201ENST00000400214 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 DGAT1O75907 488 aa6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 ETFBP38117 255 aa6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 EIF1AXP47813 144 aaKnown RBP6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 BRDTQ58F21 947 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 ARSHQ5FYA8 562 aa6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 LYPD8Q6UX82 237 aa6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 JAMLQ86YT9 394 aa6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 CCDC85AQ96PX6 553 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 ARPC5LQ9BPX5 153 aa6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 SWAP70Q9UH65 585 aa6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 DOLKQ9UPQ8 538 aa6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 TNS2Q63HR2 1409 aa6.74□□□□□ -1.33
HMGB3P7-201ENST00000400214 VIRMAQ69YN4 1812 aaKnown RBP6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 PLEKHG2Q9H7P9 1386 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 NBPF26B4DH59 902 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 PLIN1O60240 522 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 IL2RBP14784 551 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 EXOSC10Q01780 885 aaKnown RBP6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 AAMPQ13685 434 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 DDB1Q16531 1140 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 PKDCCQ504Y2 493 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 TTC39BQ5VTQ0 682 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 FAM196AQ6ZSG2 479 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 LILRB2Q8N423 598 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 TATDN2Q93075 761 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 OCSTAMPQ9BR26 566 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 TRIM55Q9BYV6 548 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 MAP3K20Q9NYL2 800 aaKnown RBP6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 PCDHGA11Q9Y5H2 935 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 NHSQ6T4R5 1651 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 RREB1Q92766 1687 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 OVOS2A0A0G2JMS6 1433 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 ITGB4P16144 1822 aa6.73□□□□□ -1.33
HMGB3P7-201ENST00000400214 CCDC85CA6NKD9 419 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 SMAPO00193 183 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 IFRD1O00458 451 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 KLF4O43474 513 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 ZNF500O60304 480 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 CAND2O75155 1236 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 FGAP02671 866 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 USP5P45974 858 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 FUT2Q10981 343 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 NFX1Q12986 1120 aaKnown RBP6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 RAB33AQ14088 237 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 DESI1Q6ICB0 168 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 SAMD7Q7Z3H4 446 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 MORC1Q86VD1 984 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 MARCH10Q8NA82 808 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 RASGRP4Q8TDF6 673 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 HNRNPLLQ8WVV9 542 aaKnown RBP6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 FAM126AQ9BYI3 521 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 SAP130Q9H0E3 1048 aa6.72□□□□□ -1.33
HMGB3P7-201ENST00000400214 BTAF1O14981 1849 aa6.71□□□□□ -1.33
HMGB3P7-201ENST00000400214 MEGF6O75095 1541 aa6.71□□□□□ -1.33
HMGB3P7-201ENST00000400214 CFAP69A5D8W1 941 aa6.71□□□□□ -1.34
HMGB3P7-201ENST00000400214 TSPAN6O43657 245 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms