RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 TRAPPC8Q9Y2L5 1435 aa17.11■□□□□ 0.33
UBXN2B-201ENST00000399598 CCDC121Q6ZUS5 278 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 DPH6Q7L8W6 267 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 ANKS4BQ8N8V4 417 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 NOC4LQ9BVI4 516 aaKnown RBP17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 RBM28Q9NW13 759 aaKnown RBP17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 OGFRQ9NZT2 677 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 HDAC9Q9UKV0 1011 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 POLR2DO15514 142 aaKnown RBP17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 FERP16591 822 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 FANCCQ00597 558 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 FAM212AQ96EL1 285 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 STMN4Q9H169 189 aaPredicted RBP17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 ARMT1Q9H993 441 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 TNNC1P63316 161 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 MSL1Q68DK7 614 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 SV2BQ7L1I2 683 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 UBE2Q2Q8WVN8 375 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 METTL22Q9BUU2 404 aaPredicted RBP17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 GPAA1O43292 621 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 DEXIO95424 95 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 LLPHQ9BRT6 129 aaKnown RBP17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 ABCC1P33527 1531 aa17.1■□□□□ 0.33
UBXN2B-201ENST00000399598 RIOK3O14730 519 aaKnown RBP17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 RIMBP2O15034 1052 aa17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 ITGA6P23229 1130 aa17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 APPBP2Q92624 585 aa17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 PIK3AP1Q6ZUJ8 805 aa17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 PARP1P09874 1014 aaKnown RBP17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 ZNF445P59923 1031 aa17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 PDE4DQ08499 809 aa17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 HDXQ7Z353 690 aa17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 NUP153P49790 1475 aaKnown RBP17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 KCNA6P17658 529 aa17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 ZNF75DP51815 510 aa17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 XAGE2Q96GT9 111 aa17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 MPHOSPH6Q99547 160 aaKnown RBP17.09■□□□□ 0.33
UBXN2B-201ENST00000399598 USP19O94966 1318 aa17.08■□□□□ 0.33
UBXN2B-201ENST00000399598 PLBD2Q8NHP8 589 aa17.08■□□□□ 0.33
UBXN2B-201ENST00000399598 LGR6Q9HBX8 967 aa17.08■□□□□ 0.33
UBXN2B-201ENST00000399598 SP4Q02446 784 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 PPM1EQ8WY54 764 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 MYL10Q9BUA6 226 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 WWC3Q9ULE0 1092 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 RPL13P26373 211 aaKnown RBP17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 PLCD1P51178 756 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 CDC37L1Q7L3B6 337 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 TTC14Q96N46 770 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 RTCBQ9Y3I0 505 aaKnown RBP17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 JAK2O60674 1132 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 CCDC65Q8IXS2 484 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 FAM76AQ8TAV0 307 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 CARD6Q9BX69 1037 aa17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 SAP30BPQ9UHR5 308 aaKnown RBP17.08■□□□□ 0.32
UBXN2B-201ENST00000399598 ZNF202O95125 648 aa17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 KBTBD3Q8NAB2 608 aa17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 ANKRD2Q9GZV1 360 aa17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 MTRF1LQ9UGC7 380 aaKnown RBP17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 CCDC63Q8NA47 563 aa17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 SUCLG2Q96I99 432 aa17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 CALCOCO2Q13137 446 aa17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 PHKBQ93100 1093 aa17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 KCNK9Q9NPC2 374 aa17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 GTF2A1P52655 376 aaPredicted RBP17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 RNASE9P60153 205 aaKnown RBP17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 PPP1R7Q15435 360 aa17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 C19orf44Q9H6X5 657 aa17.07■□□□□ 0.32
UBXN2B-201ENST00000399598 CSGALNACT2Q8N6G5 542 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 GPCPD1Q9NPB8 672 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 NFE2L3Q9Y4A8 694 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 TTC6Q86TZ1 520 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 TEX11Q8IYF3 940 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 C10orf67Q8IYJ2 551 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 NAPGQ99747 312 aaPredicted RBP17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 DENND2AQ9ULE3 1009 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 MRPL12P52815 198 aaKnown RBP17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 TMEM87AQ8NBN3 555 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 SREK1Q8WXA9 508 aaKnown RBP17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 PKD2L1Q9P0L9 805 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 AOX1Q06278 1338 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 UBLCP1Q8WVY7 318 aaPredicted RBP17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 CCDC114Q96M63 670 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 SH3TC1Q8TE82 1336 aa17.06■□□□□ 0.32
UBXN2B-201ENST00000399598 ARL1P40616 181 aaPredicted RBP17.05■□□□□ 0.32
UBXN2B-201ENST00000399598 ZNF354CQ86Y25 554 aa17.05■□□□□ 0.32
UBXN2B-201ENST00000399598 TMEM63CQ9P1W3 806 aa17.05■□□□□ 0.32
UBXN2B-201ENST00000399598 CUTAO60888 179 aa17.05■□□□□ 0.32
UBXN2B-201ENST00000399598 PUM3Q15397 648 aaKnown RBP17.05■□□□□ 0.32
UBXN2B-201ENST00000399598 RBM26Q5T8P6 1007 aaKnown RBP17.05■□□□□ 0.32
UBXN2B-201ENST00000399598 C8orf37Q96NL8 207 aa17.05■□□□□ 0.32
UBXN2B-201ENST00000399598 MTUS1Q9ULD2 1270 aa17.05■□□□□ 0.32
UBXN2B-201ENST00000399598 A1BGP04217 495 aa17.05■□□□□ 0.32
UBXN2B-201ENST00000399598 EIF6P56537 245 aaKnown RBP17.05■□□□□ 0.32
UBXN2B-201ENST00000399598 ELF2Q15723 593 aa17.05■□□□□ 0.32
UBXN2B-201ENST00000399598 TSGA10Q9BZW7 698 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms