RNA–Protein interactions for RNA: ENST00000399562.8

C22orf39-202, Transcript of chromosome 22 open reading frame 39, humanhuman

TSL 1 (best) BASIC

Gene C22orf39, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C22orf39-202ENST00000399562 FBXO9Q9UK97 447 aaPredicted RBP13.71□□□□□ -0.22
C22orf39-202ENST00000399562 FOSBP53539 338 aa13.7□□□□□ -0.22
C22orf39-202ENST00000399562 KRT28Q7Z3Y7 464 aa13.7□□□□□ -0.22
C22orf39-202ENST00000399562 TBC1D31Q96DN5 1066 aa13.7□□□□□ -0.22
C22orf39-202ENST00000399562 DUSP9Q99956 384 aaKnown RBP13.7□□□□□ -0.22
C22orf39-202ENST00000399562 MBIPQ9NS73 344 aa13.7□□□□□ -0.22
C22orf39-202ENST00000399562 AATFQ9NY61 560 aaKnown RBP eCLIP13.7□□□□□ -0.22
C22orf39-202ENST00000399562 TPCN1Q9ULQ1 816 aa13.7□□□□□ -0.22
C22orf39-202ENST00000399562 ARHGEF28Q8N1W1 1705 aaKnown RBP13.7□□□□□ -0.22
C22orf39-202ENST00000399562 MYCLP1P12525 358 aaPredicted RBP13.7□□□□□ -0.22
C22orf39-202ENST00000399562 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
C22orf39-202ENST00000399562 TPX2Q9ULW0 747 aaKnown RBP13.7□□□□□ -0.22
C22orf39-202ENST00000399562 FIBPO43427 364 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 EVA1CP58658 441 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 SF3B2Q13435 895 aaKnown RBP13.69□□□□□ -0.22
C22orf39-202ENST00000399562 TBC1D9Q6ZT07 1266 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 NANOGNBQ7Z5D8 188 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 SDCCAG8Q86SQ7 713 aaPredicted RBP13.69□□□□□ -0.22
C22orf39-202ENST00000399562 BRD8Q9H0E9 1235 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 PTPRUQ92729 1446 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 EIF4BP23588 611 aaKnown RBP13.69□□□□□ -0.22
C22orf39-202ENST00000399562 FAM204AQ9H8W3 233 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 PUF60Q9UHX1 559 aaKnown RBP13.69□□□□□ -0.22
C22orf39-202ENST00000399562 TSPYL4Q9UJ04 414 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 IQSEC2Q5JU85 1478 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 CD163L1Q9NR16 1453 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 SPDYE3A6NKU9 549 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 LSM1O15116 133 aaKnown RBP13.69□□□□□ -0.22
C22orf39-202ENST00000399562 SMIM24O75264 130 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 PDHBP11177 359 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 USP48Q86UV5 1035 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 TTC30BQ8N4P2 665 aa13.69□□□□□ -0.22
C22orf39-202ENST00000399562 MMTAG2Q9BU76 263 aaKnown RBP13.69□□□□□ -0.22
C22orf39-202ENST00000399562 TESPA1A2RU30 521 aaPredicted RBP13.68□□□□□ -0.22
C22orf39-202ENST00000399562 GOLGA6L10A6NI86 522 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 DTNBO60941 627 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 NUCB1Q02818 461 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 CAMK4Q16566 473 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 SMCR8Q8TEV9 937 aaPredicted RBP13.68□□□□□ -0.22
C22orf39-202ENST00000399562 DHRS1Q96LJ7 313 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 SHPRHQ149N8 1683 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 hCG_2014768A0A024R1R8 64 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 SESN3P58005 492 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 IFT88Q13099 833 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 DNAAF2Q9NVR5 837 aaKnown RBP13.68□□□□□ -0.22
C22orf39-202ENST00000399562 NUTM2BA6NNL0 878 aaPredicted RBP13.68□□□□□ -0.22
C22orf39-202ENST00000399562 NUTM2EB1AL46 878 aaPredicted RBP13.68□□□□□ -0.22
C22orf39-202ENST00000399562 GNAT1P11488 350 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
C22orf39-202ENST00000399562 SIRT2Q8IXJ6 389 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.68□□□□□ -0.22
C22orf39-202ENST00000399562 NEK9Q8TD19 979 aa13.68□□□□□ -0.22
C22orf39-202ENST00000399562 LRRC59Q96AG4 307 aaKnown RBP13.68□□□□□ -0.22
C22orf39-202ENST00000399562 PPFIA3O75145 1194 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 VAMP4O75379 141 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 VCAM1P19320 739 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 TEFQ10587 303 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 PUS10Q3MIT2 529 aaKnown RBP13.67□□□□□ -0.22
C22orf39-202ENST00000399562 RNF168Q8IYW5 571 aaPredicted RBP13.67□□□□□ -0.22
C22orf39-202ENST00000399562 SPATA17Q96L03 361 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 EYA1Q99502 592 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 RHBDL2Q9NX52 303 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 DDX20Q9UHI6 824 aaKnown RBP13.67□□□□□ -0.22
C22orf39-202ENST00000399562 ZDHHC9Q9Y397 364 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 FUT4P22083 530 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 DMPKQ09013 629 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 Q4G0T1 1027 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 IQCF2Q8IXL9 164 aa13.67□□□□□ -0.22
C22orf39-202ENST00000399562 FAM163AQ96GL9 167 aaPredicted RBP13.67□□□□□ -0.22
C22orf39-202ENST00000399562 TFIP11Q9UBB9 837 aaKnown RBP13.67□□□□□ -0.22
C22orf39-202ENST00000399562 NDUFB5O43674 189 aa13.66□□□□□ -0.22
C22orf39-202ENST00000399562 LONRF2Q1L5Z9 754 aa13.66□□□□□ -0.22
C22orf39-202ENST00000399562 TSC22D3Q99576 134 aa13.66□□□□□ -0.22
C22orf39-202ENST00000399562 MRGBPQ9NV56 204 aa13.66□□□□□ -0.22
C22orf39-202ENST00000399562 N6AMT1Q9Y5N5 214 aa13.66□□□□□ -0.22
C22orf39-202ENST00000399562 BZW2Q9Y6E2 419 aaKnown RBP13.66□□□□□ -0.22
C22orf39-202ENST00000399562 ATP8B1O43520 1251 aa13.66□□□□□ -0.22
C22orf39-202ENST00000399562 ATP2C2O75185 946 aa13.66□□□□□ -0.22
C22orf39-202ENST00000399562 KRT38O76015 456 aa13.66□□□□□ -0.22
C22orf39-202ENST00000399562 TSR1Q2NL82 804 aaKnown RBP13.66□□□□□ -0.22
C22orf39-202ENST00000399562 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.66□□□□□ -0.22
C22orf39-202ENST00000399562 TRIM7Q9C029 511 aa13.66□□□□□ -0.22
C22orf39-202ENST00000399562 ZBTB7BO15156 539 aaPredicted RBP13.66□□□□□ -0.22
C22orf39-202ENST00000399562 PAPOLAP51003 745 aaKnown RBP13.66□□□□□ -0.22
C22orf39-202ENST00000399562 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
C22orf39-202ENST00000399562 CCDC65Q8IXS2 484 aa13.66□□□□□ -0.22
C22orf39-202ENST00000399562 HELLSQ9NRZ9 838 aa13.66□□□□□ -0.22
C22orf39-202ENST00000399562 F6X3S4 739 aa13.65□□□□□ -0.22
C22orf39-202ENST00000399562 CCDC144BQ3MJ40 725 aa13.65□□□□□ -0.22
C22orf39-202ENST00000399562 CCDC144CPQ8IYA2 1237 aa13.65□□□□□ -0.22
C22orf39-202ENST00000399562 CEP112Q8N8E3 955 aa13.65□□□□□ -0.22
C22orf39-202ENST00000399562 USP33Q8TEY7 942 aa13.65□□□□□ -0.22
C22orf39-202ENST00000399562 KLC4Q9NSK0 619 aa13.65□□□□□ -0.22
C22orf39-202ENST00000399562 REREQ9P2R6 1566 aa13.65□□□□□ -0.22
C22orf39-202ENST00000399562 ATP7BP35670 1465 aa13.65□□□□□ -0.22
C22orf39-202ENST00000399562 MYO3AQ8NEV4 1616 aa13.65□□□□□ -0.22
C22orf39-202ENST00000399562 BECN2A8MW95 431 aa13.65□□□□□ -0.22
C22orf39-202ENST00000399562 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
C22orf39-202ENST00000399562 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms