RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 LRRFIP1Q32MZ4 808 aaKnown RBP21.43■■□□□ 1.02
CTNS-203ENST00000399306 ZSCAN25Q6NSZ9 544 aa21.43■■□□□ 1.02
CTNS-203ENST00000399306 FAM83AQ86UY5 434 aa21.43■■□□□ 1.02
CTNS-203ENST00000399306 PLEKHM2Q8IWE5 1019 aa21.43■■□□□ 1.02
CTNS-203ENST00000399306 CCDC136Q96JN2 1154 aa21.43■■□□□ 1.02
CTNS-203ENST00000399306 TDRD3Q9H7E2 651 aaKnown RBP21.43■■□□□ 1.02
CTNS-203ENST00000399306 ASTN2O75129 1339 aaPredicted RBP21.43■■□□□ 1.02
CTNS-203ENST00000399306 NPM3O75607 178 aaKnown RBP21.42■■□□□ 1.02
CTNS-203ENST00000399306 BAG3O95817 575 aa21.42■■□□□ 1.02
CTNS-203ENST00000399306 PLCG2P16885 1265 aa21.42■■□□□ 1.02
CTNS-203ENST00000399306 TNNI2P48788 182 aa21.42■■□□□ 1.02
CTNS-203ENST00000399306 KBTBD3Q8NAB2 608 aa21.42■■□□□ 1.02
CTNS-203ENST00000399306 GLIS2Q9BZE0 524 aaPredicted RBP21.42■■□□□ 1.02
CTNS-203ENST00000399306 NDUFB9Q9Y6M9 179 aa21.42■■□□□ 1.02
CTNS-203ENST00000399306 BTDP43251 543 aa21.41■■□□□ 1.02
CTNS-203ENST00000399306 CDC42EP5Q6NZY7 148 aa21.41■■□□□ 1.02
CTNS-203ENST00000399306 USP48Q86UV5 1035 aa21.41■■□□□ 1.02
CTNS-203ENST00000399306 NOL10Q9BSC4 688 aaKnown RBP21.41■■□□□ 1.02
CTNS-203ENST00000399306 IDI2Q9BXS1 227 aa21.41■■□□□ 1.02
CTNS-203ENST00000399306 PPP4R2Q9NY27 417 aa21.41■■□□□ 1.02
CTNS-203ENST00000399306 RPAP1Q9BWH6 1393 aaPredicted RBP21.4■■□□□ 1.02
CTNS-203ENST00000399306 ZFYP08048 801 aaPredicted RBP21.4■■□□□ 1.02
CTNS-203ENST00000399306 UBE3CQ15386 1083 aa21.4■■□□□ 1.02
CTNS-203ENST00000399306 SLC9C2Q5TAH2 1124 aa21.4■■□□□ 1.02
CTNS-203ENST00000399306 DEFB129Q9H1M3 183 aa21.4■■□□□ 1.02
CTNS-203ENST00000399306 RFX7Q2KHR2 1363 aa21.39■■□□□ 1.02
CTNS-203ENST00000399306 CLRN2A0PK11 232 aa21.39■■□□□ 1.01
CTNS-203ENST00000399306 PDE6AP16499 860 aa21.39■■□□□ 1.01
CTNS-203ENST00000399306 CYP7A1P22680 504 aa21.39■■□□□ 1.01
CTNS-203ENST00000399306 ADD2P35612 726 aa21.39■■□□□ 1.01
CTNS-203ENST00000399306 APLP1P51693 650 aa21.39■■□□□ 1.01
CTNS-203ENST00000399306 TSHZ3Q63HK5 1081 aa21.39■■□□□ 1.01
CTNS-203ENST00000399306 MAGEB6Q8N7X4 407 aa21.39■■□□□ 1.01
CTNS-203ENST00000399306 EDC3Q96F86 508 aaKnown RBP21.39■■□□□ 1.01
CTNS-203ENST00000399306 VEZTQ9HBM0 779 aa21.39■■□□□ 1.01
CTNS-203ENST00000399306 USP40Q9NVE5 1235 aa21.39■■□□□ 1.01
CTNS-203ENST00000399306 TCRBV5S4A2TA0A5A2 114 aa21.38■■□□□ 1.01
CTNS-203ENST00000399306 ENTPD3O75355 529 aa21.38■■□□□ 1.01
CTNS-203ENST00000399306 HSPA6P17066 643 aa21.38■■□□□ 1.01
CTNS-203ENST00000399306 RHBDL3P58872 404 aa21.38■■□□□ 1.01
CTNS-203ENST00000399306 EVI5LQ96CN4 794 aa21.38■■□□□ 1.01
CTNS-203ENST00000399306 ADM5C9JUS6 153 aa21.37■■□□□ 1.01
CTNS-203ENST00000399306 FKBP1BP68106 108 aa21.37■■□□□ 1.01
CTNS-203ENST00000399306 FAM151AQ8WW52 585 aa21.37■■□□□ 1.01
CTNS-203ENST00000399306 CDCA5Q96FF9 252 aa21.37■■□□□ 1.01
CTNS-203ENST00000399306 TRAF5O00463 557 aa21.36■■□□□ 1.01
CTNS-203ENST00000399306 PDE4AP27815 886 aa21.36■■□□□ 1.01
CTNS-203ENST00000399306 NF2P35240 595 aa21.36■■□□□ 1.01
CTNS-203ENST00000399306 RASA3Q14644 834 aa21.36■■□□□ 1.01
CTNS-203ENST00000399306 SUPT20HL1Q3ZLR7 823 aa21.36■■□□□ 1.01
CTNS-203ENST00000399306 HOOK2Q96ED9 719 aa21.36■■□□□ 1.01
CTNS-203ENST00000399306 CREBZFQ9NS37 354 aa21.36■■□□□ 1.01
CTNS-203ENST00000399306 COL2A1P02458 1487 aaPredicted RBP21.36■■□□□ 1.01
CTNS-203ENST00000399306 ZNF532Q9HCE3 1301 aa21.35■■□□□ 1.01
CTNS-203ENST00000399306 FOCADQ5VW36 1801 aa21.35■■□□□ 1.01
CTNS-203ENST00000399306 TMEM88BA6NKF7 163 aa21.35■■□□□ 1.01
CTNS-203ENST00000399306 WDHD1O75717 1129 aaPredicted RBP21.35■■□□□ 1.01
CTNS-203ENST00000399306 ADGRA1Q86SQ6 560 aa21.35■■□□□ 1.01
CTNS-203ENST00000399306 CNTNAP1P78357 1384 aa21.35■■□□□ 1.01
CTNS-203ENST00000399306 TCP10L2B9ZVM9 353 aa21.34■■□□□ 1.01
CTNS-203ENST00000399306 AATFQ9NY61 560 aaKnown RBP eCLIP21.34■■□□□ 1.01
CTNS-203ENST00000399306 FAM198AQ9UFP1 575 aa21.34■■□□□ 1.01
CTNS-203ENST00000399306 CDK5RAP2Q96SN8 1893 aa21.33■■□□□ 1.01
CTNS-203ENST00000399306 UNCXA6NJT0 531 aa21.33■■□□□ 1.01
CTNS-203ENST00000399306 RNF113AO15541 343 aaKnown RBP21.33■■□□□ 1.01
CTNS-203ENST00000399306 CELF2O95319 508 aaKnown RBP21.33■■□□□ 1.01
CTNS-203ENST00000399306 CST9Q5W186 159 aa21.33■■□□□ 1.01
CTNS-203ENST00000399306 TEX11Q8IYF3 940 aa21.33■■□□□ 1.01
CTNS-203ENST00000399306 TEPSINQ96N21 525 aa21.33■■□□□ 1.01
CTNS-203ENST00000399306 RIOK1Q9BRS2 568 aaKnown RBP21.33■■□□□ 1.01
CTNS-203ENST00000399306 PAPPA2Q9BXP8 1791 aa21.33■■□□□ 1
CTNS-203ENST00000399306 MAGEB6P1A0A0J9YX57 407 aa21.32■■□□□ 1
CTNS-203ENST00000399306 NFIAQ12857 509 aa21.32■■□□□ 1
CTNS-203ENST00000399306 APPBP2Q92624 585 aa21.32■■□□□ 1
CTNS-203ENST00000399306 HHIPL1Q96JK4 782 aa21.32■■□□□ 1
CTNS-203ENST00000399306 FSD1Q9BTV5 496 aa21.32■■□□□ 1
CTNS-203ENST00000399306 AK9Q5TCS8 1911 aa21.31■■□□□ 1
CTNS-203ENST00000399306 RGS3P49796 1198 aa21.31■■□□□ 1
CTNS-203ENST00000399306 CACNB3P54284 484 aa21.31■■□□□ 1
CTNS-203ENST00000399306 C2orf69Q8N8R5 385 aa21.31■■□□□ 1
CTNS-203ENST00000399306 SH3RF3Q8TEJ3 882 aaPredicted RBP21.31■■□□□ 1
CTNS-203ENST00000399306 GBA2Q9HCG7 927 aaPredicted RBP21.31■■□□□ 1
CTNS-203ENST00000399306 ATRNL1Q5VV63 1379 aa21.31■■□□□ 1
CTNS-203ENST00000399306 MAP3K11Q16584 847 aa21.3■■□□□ 1
CTNS-203ENST00000399306 TTC22Q5TAA0 569 aa21.3■■□□□ 1
CTNS-203ENST00000399306 TMEM39BQ9GZU3 492 aa21.3■■□□□ 1
CTNS-203ENST00000399306 FMR1Q06787 632 aaKnown RBP eCLIP21.29■■□□□ 1
CTNS-203ENST00000399306 MIGA1Q8NAN2 632 aa21.29■■□□□ 1
CTNS-203ENST00000399306 CRNKL1Q9BZJ0 848 aaKnown RBP21.29■■□□□ 1
CTNS-203ENST00000399306 OSBPL5Q9H0X9 879 aaPredicted RBP21.29■■□□□ 1
CTNS-203ENST00000399306 DHX36Q9H2U1 1008 aaKnown RBP21.29■■□□□ 1
CTNS-203ENST00000399306 DDX4Q9NQI0 724 aaKnown RBP21.29■■□□□ 1
CTNS-203ENST00000399306 TLL2Q9Y6L7 1015 aa21.29■■□□□ 1
CTNS-203ENST00000399306 HIP1O00291 1037 aa21.28■■□□□ 1
CTNS-203ENST00000399306 PPP1R12BO60237 982 aaPredicted RBP21.28■■□□□ 1
CTNS-203ENST00000399306 DYNLL1P63167 89 aaKnown RBP21.28■■□□□ 1
CTNS-203ENST00000399306 ZMYM1Q5SVZ6 1142 aa21.28■■□□□ 1
CTNS-203ENST00000399306 NBPF12Q5TAG4 269 aaPredicted RBP21.28■■□□□ 1
CTNS-203ENST00000399306 ARMC9Q7Z3E5 817 aa21.28■■□□□ 1
CTNS-203ENST00000399306 AIDAQ96BJ3 306 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms