RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 NSUN7Q8NE18 718 aaKnown RBP13.16□□□□□ -0.3
RCC1-204ENST00000398958 LEO1Q8WVC0 666 aaPredicted RBP13.16□□□□□ -0.3
RCC1-204ENST00000398958 PGBD1Q96JS3 809 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 SENP2Q9HC62 589 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 AKAP2Q9Y2D5 859 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 CYP2D7A0A087X1C5 515 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 NR1I2O75469 434 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 CTDSPL2Q05D32 466 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 KRT222Q8N1A0 295 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 SDR42E1Q8WUS8 393 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 GPR108Q9NPR9 543 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 TMEM51Q9NW97 253 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 ZNF532Q9HCE3 1301 aa13.16□□□□□ -0.3
RCC1-204ENST00000398958 ABCC12Q96J65 1359 aa13.15□□□□□ -0.3
RCC1-204ENST00000398958 RIC1Q4ADV7 1423 aa13.15□□□□□ -0.3
RCC1-204ENST00000398958 PDIA3P30101 505 aaKnown RBP13.15□□□□□ -0.3
RCC1-204ENST00000398958 CCDC152Q4G0S7 254 aa13.15□□□□□ -0.3
RCC1-204ENST00000398958 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.15□□□□□ -0.3
RCC1-204ENST00000398958 DSCC1Q9BVC3 393 aa13.15□□□□□ -0.3
RCC1-204ENST00000398958 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
RCC1-204ENST00000398958 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.15□□□□□ -0.3
RCC1-204ENST00000398958 V9GYY5 206 aaPredicted RBP13.15□□□□□ -0.3
RCC1-204ENST00000398958 PRDM1O75626 825 aa13.15□□□□□ -0.3
RCC1-204ENST00000398958 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
RCC1-204ENST00000398958 ZNF165P49910 485 aa13.15□□□□□ -0.3
RCC1-204ENST00000398958 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
RCC1-204ENST00000398958 TERF2Q15554 542 aa13.15□□□□□ -0.3
RCC1-204ENST00000398958 CCDC144BQ3MJ40 725 aa13.15□□□□□ -0.3
RCC1-204ENST00000398958 CMTR1Q8N1G2 835 aaKnown RBP13.15□□□□□ -0.3
RCC1-204ENST00000398958 ANKIB1Q9P2G1 1089 aa13.15□□□□□ -0.3
RCC1-204ENST00000398958 UBE2Q2LH0YL09 131 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 PDCP20941 246 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 NFIXQ14938 502 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 ZNF397Q8NF99 534 aaPredicted RBP13.14□□□□□ -0.31
RCC1-204ENST00000398958 TDRD7Q8NHU6 1098 aaKnown RBP13.14□□□□□ -0.31
RCC1-204ENST00000398958 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 DNAJC25Q9H1X3 360 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 TRPC5Q9UL62 973 aaPredicted RBP13.14□□□□□ -0.31
RCC1-204ENST00000398958 CENPFP49454 3210 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 PAPPAQ13219 1627 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 COL4A1P02462 1669 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 KLF18A0A0U1RQI7 1052 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 VGLL3A8MV65 326 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 MINDY4BA8MYZ0 360 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 PRC1O43663 620 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 RESTQ13127 1097 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
RCC1-204ENST00000398958 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
RCC1-204ENST00000398958 PFKFB2O60825 505 aa13.13□□□□□ -0.31
RCC1-204ENST00000398958 TRIM28Q13263 835 aaKnown RBP13.13□□□□□ -0.31
RCC1-204ENST00000398958 IMMTQ16891 758 aaKnown RBP13.13□□□□□ -0.31
RCC1-204ENST00000398958 KMT5BQ4FZB7 885 aa13.13□□□□□ -0.31
RCC1-204ENST00000398958 ANKRD18AQ8IVF6 992 aa13.13□□□□□ -0.31
RCC1-204ENST00000398958 DDX19AQ9NUU7 478 aaKnown RBP13.13□□□□□ -0.31
RCC1-204ENST00000398958 ZNF215Q9UL58 517 aaPredicted RBP13.13□□□□□ -0.31
RCC1-204ENST00000398958 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.13□□□□□ -0.31
RCC1-204ENST00000398958 ERVV-1B6SEH8 477 aa13.13□□□□□ -0.31
RCC1-204ENST00000398958 ELP1O95163 1332 aa13.13□□□□□ -0.31
RCC1-204ENST00000398958 CCDC66A2RUB6 948 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 USP27XA6NNY8 438 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 GOLGA8BA8MQT2 603 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 ZNF213O14771 459 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 MBD4O95243 580 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 ANTXR2P58335 489 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 LAMA4Q16363 1823 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 TBC1D10CQ8IV04 446 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 SPATA5Q8NB90 893 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 NBPF3Q9H094 633 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 CLSTN2Q9H4D0 955 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 ZNF652Q9Y2D9 606 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 MYO5AQ9Y4I1 1855 aaKnown RBP13.12□□□□□ -0.31
RCC1-204ENST00000398958 B4E1Z4 1266 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 APBA3O96018 575 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 FDPSP14324 419 aaKnown RBP13.12□□□□□ -0.31
RCC1-204ENST00000398958 DYNLL1P63167 89 aaKnown RBP13.12□□□□□ -0.31
RCC1-204ENST00000398958 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 PUM3Q15397 648 aaKnown RBP13.12□□□□□ -0.31
RCC1-204ENST00000398958 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 ADGRA1Q86SQ6 560 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 VGLL2Q8N8G2 317 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 APPBP2Q92624 585 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 AIDAQ96BJ3 306 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 USP28Q96RU2 1077 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 SCAND2PQ9GZW5 306 aaPredicted RBP13.12□□□□□ -0.31
RCC1-204ENST00000398958 ERICH4A6NGS2 130 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 F8W031 263 aaPredicted RBP13.12□□□□□ -0.31
RCC1-204ENST00000398958 PDIA4P13667 645 aaKnown RBP13.12□□□□□ -0.31
RCC1-204ENST00000398958 CDK11BP21127 795 aaKnown RBP13.12□□□□□ -0.31
RCC1-204ENST00000398958 CYB5R4Q7L1T6 521 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 LRRC8AQ8IWT6 810 aa13.12□□□□□ -0.31
RCC1-204ENST00000398958 PDGFDQ9GZP0 370 aaPredicted RBP13.12□□□□□ -0.31
RCC1-204ENST00000398958 GOLGA6L19H0YKK7 550 aa13.11□□□□□ -0.31
RCC1-204ENST00000398958 KRT27Q7Z3Y8 459 aa13.11□□□□□ -0.31
RCC1-204ENST00000398958 RALYLQ86SE5 291 aaKnown RBP13.11□□□□□ -0.31
RCC1-204ENST00000398958 NLRP3Q96P20 1036 aa13.11□□□□□ -0.31
RCC1-204ENST00000398958 PLA2G12BQ9BX93 195 aa13.11□□□□□ -0.31
RCC1-204ENST00000398958 ALDH8A1Q9H2A2 487 aaPredicted RBP13.11□□□□□ -0.31
RCC1-204ENST00000398958 hCG_1642624A0A1W2PR95 340 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms