RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PLIN2Q99541 437 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 RTEL1Q9NZ71 1219 aa5.67□□□□□ -1.5
SMAD4-202ENST00000398417 IFNL3Q8IZI9 196 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 SPATA5Q8NB90 893 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 ZNF202O95125 648 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 SLU7O95391 586 aaKnown RBP5.66□□□□□ -1.5
SMAD4-202ENST00000398417 ATP6V1AP38606 617 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 GRAMD1CQ8IYS0 662 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 ISCA1Q9BUE6 129 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 BRMS1Q9HCU9 246 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 PAXBP1Q9Y5B6 917 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 SPATA31D1Q6ZQQ2 1576 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 ELF2Q15723 593 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 KIF18AQ8NI77 898 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 CCDC34Q96HJ3 373 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 UBE2Q2LH0YL09 131 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 PDE6AP16499 860 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 TSGA10IPQ3SY00 556 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 FILIP1LQ4L180 1135 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 IL17RAQ96F46 866 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 GNL3LQ9NVN8 582 aaKnown RBP5.66□□□□□ -1.5
SMAD4-202ENST00000398417 V9GY48 417 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-202ENST00000398417 NEDD4P46934 1319 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 MAGEB6P1A0A0J9YX57 407 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 PATL2C9JE40 543 aaKnown RBP5.66□□□□□ -1.5
SMAD4-202ENST00000398417 DYNLL1P63167 89 aaKnown RBP5.66□□□□□ -1.5
SMAD4-202ENST00000398417 FAM47AQ5JRC9 791 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 PLA2G4DQ86XP0 818 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 TTLL11Q8NHH1 800 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 PIGBQ92521 554 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 MRFAP1L1Q96HT8 127 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 ARGLU1Q9NWB6 273 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-202ENST00000398417 BTBD18B2RXH4 712 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 POLR3GO15318 223 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-202ENST00000398417 ADD2P35612 726 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 MYL5Q02045 173 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 SUSD4Q5VX71 490 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 BRINP3Q76B58 766 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 LRRC8AQ8IWT6 810 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 LCORLQ8N3X6 602 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 CARD6Q9BX69 1037 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 SH2B2O14492 632 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-202ENST00000398417 CMA1P23946 247 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 CASQ1P31415 396 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 GNG11P61952 73 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 UBXN4Q92575 508 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 TRERF1Q96PN7 1200 aa5.66□□□□□ -1.5
SMAD4-202ENST00000398417 TMEM232C9JQI7 657 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 KRT23Q9C075 422 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 BLZF1Q9H2G9 400 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 TFCP2L1Q9NZI6 479 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 KCNH3Q9ULD8 1083 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 NRKQ7Z2Y5 1582 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 SETD1BQ9UPS6 1966 aaKnown RBP5.65□□□□□ -1.5
SMAD4-202ENST00000398417 CCP110O43303 1012 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 ATP1A3P13637 1013 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 GIGYF2Q6Y7W6 1299 aaKnown RBP5.65□□□□□ -1.5
SMAD4-202ENST00000398417 ZNF215Q9UL58 517 aaPredicted RBP5.65□□□□□ -1.5
SMAD4-202ENST00000398417 SPATA31A3Q5VYP0 1347 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 MYOM1P52179 1685 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 WDHD1O75717 1129 aaPredicted RBP5.65□□□□□ -1.5
SMAD4-202ENST00000398417 PRR29P0C7W0 189 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 DHX40Q8IX18 779 aaKnown RBP5.65□□□□□ -1.5
SMAD4-202ENST00000398417 SMAP1Q8IYB5 467 aaPredicted RBP5.65□□□□□ -1.5
SMAD4-202ENST00000398417 FMR1NBQ8N0W7 255 aaPredicted RBP5.65□□□□□ -1.5
SMAD4-202ENST00000398417 LPIN2Q92539 896 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 ATG3Q9NT62 314 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 CCDC87Q9NVE4 849 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 WDR17Q8IZU2 1322 aa5.65□□□□□ -1.5
SMAD4-202ENST00000398417 ADGRL3Q9HAR2 1447 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 GPIHBP1Q8IV16 184 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 ZBTB38Q8NAP3 1195 aaPredicted RBP5.65□□□□□ -1.51
SMAD4-202ENST00000398417 ZNF397Q8NF99 534 aaPredicted RBP5.65□□□□□ -1.51
SMAD4-202ENST00000398417 OXER1Q8TDS5 423 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 TMEM87BQ96K49 555 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 KIAA1468Q9P260 1216 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 TPM1P09493 284 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 MCAMP43121 646 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 CTSWP56202 376 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 LONRF3Q496Y0 759 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.65□□□□□ -1.51
SMAD4-202ENST00000398417 CEP131Q9UPN4 1083 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 MAP3K15Q6ZN16 1313 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 A0A1W2PQ27 194 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 A0A1W2PQ64 194 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 A0A1W2PQD8 194 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 MATR3P43243 847 aaKnown RBP eCLIP5.65□□□□□ -1.516e-9■■□□□ 12.9
SMAD4-202ENST00000398417 GYG1P46976 350 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 TTC16Q8NEE8 873 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 ZMYM6O95789 1325 aa5.65□□□□□ -1.51
SMAD4-202ENST00000398417 CUTAO60888 179 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 PPARAQ07869 468 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 CAVIN4Q5BKX8 364 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 ATL3Q6DD88 541 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 ANKRD18AQ8IVF6 992 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 KCNQ4P56696 695 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 CCDC152Q4G0S7 254 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 NOL10Q9BSC4 688 aaKnown RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 RNF41Q9H4P4 317 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 OGFRQ9NZT2 677 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms