RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 SOS1Q07889 1333 aaPredicted RBP13.19□□□□□ -0.3
PUM3-202ENST00000397885 FLT4P35916 1363 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 F6X3S4 739 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 IKBKBO14920 756 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 CPA1P15085 419 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 AFAP1L1Q8TED9 768 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 CNKSR2Q8WXI2 1034 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 FAM204AQ9H8W3 233 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 PXDNLA1KZ92 1463 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 EBAG9O00559 213 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 PLSCR1O15162 318 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 CASP8Q14790 479 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 NECTIN1Q15223 517 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 ADCK5Q3MIX3 580 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 MAP9Q49MG5 647 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 LTV1Q96GA3 475 aaPredicted RBP13.18□□□□□ -0.3
PUM3-202ENST00000397885 N4BP2Q86UW6 1770 aaPredicted RBP13.18□□□□□ -0.3
PUM3-202ENST00000397885 KDRP35968 1356 aa13.18□□□□□ -0.3
PUM3-202ENST00000397885 CUTAO60888 179 aa13.17□□□□□ -0.3
PUM3-202ENST00000397885 GPTP24298 496 aa13.17□□□□□ -0.3
PUM3-202ENST00000397885 IRX1P78414 480 aaPredicted RBP13.17□□□□□ -0.3
PUM3-202ENST00000397885 CWC27Q6UX04 472 aaKnown RBP13.17□□□□□ -0.3
PUM3-202ENST00000397885 G2E3Q7L622 706 aa13.17□□□□□ -0.3
PUM3-202ENST00000397885 SGSM3Q96HU1 749 aa13.17□□□□□ -0.3
PUM3-202ENST00000397885 CABS1Q96KC9 395 aa13.17□□□□□ -0.3
PUM3-202ENST00000397885 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
PUM3-202ENST00000397885 N4BP1O75113 896 aaKnown RBP13.17□□□□□ -0.3
PUM3-202ENST00000397885 MTHFSDQ2M296 383 aaKnown RBP13.17□□□□□ -0.3
PUM3-202ENST00000397885 FMNL3Q8IVF7 1028 aa13.17□□□□□ -0.3
PUM3-202ENST00000397885 WDR24Q96S15 920 aa13.17□□□□□ -0.3
PUM3-202ENST00000397885 BSDC1Q9NW68 430 aaPredicted RBP13.17□□□□□ -0.3
PUM3-202ENST00000397885 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
PUM3-202ENST00000397885 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
PUM3-202ENST00000397885 STX10O60499 249 aa13.16□□□□□ -0.3
PUM3-202ENST00000397885 IFIT2P09913 472 aaKnown RBP13.16□□□□□ -0.3
PUM3-202ENST00000397885 ELF1P32519 619 aa13.16□□□□□ -0.3
PUM3-202ENST00000397885 FLIIQ13045 1269 aa13.16□□□□□ -0.3
PUM3-202ENST00000397885 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
PUM3-202ENST00000397885 CCDC102AQ96A19 550 aa13.16□□□□□ -0.3
PUM3-202ENST00000397885 ABCB6Q9NP58 842 aa13.16□□□□□ -0.3
PUM3-202ENST00000397885 FAM169AQ9Y6X4 670 aa13.16□□□□□ -0.3
PUM3-202ENST00000397885 ANKRD65E5RJM6 399 aa13.16□□□□□ -0.3
PUM3-202ENST00000397885 FANCCQ00597 558 aa13.16□□□□□ -0.3
PUM3-202ENST00000397885 PLEKHO1Q53GL0 409 aaPredicted RBP13.16□□□□□ -0.3
PUM3-202ENST00000397885 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
PUM3-202ENST00000397885 DHX58Q96C10 678 aa13.16□□□□□ -0.3
PUM3-202ENST00000397885 MCM8Q9UJA3 840 aa13.16□□□□□ -0.3
PUM3-202ENST00000397885 LRP5O75197 1615 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 KLHL33A6NCF5 533 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 CHUKO15111 745 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 R3HDM1Q15032 1099 aaKnown RBP13.15□□□□□ -0.3
PUM3-202ENST00000397885 PPP2R5AQ15172 486 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 SPATS2Q86XZ4 545 aaKnown RBP13.15□□□□□ -0.3
PUM3-202ENST00000397885 TMEM139Q8IV31 216 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 FAM212AQ96EL1 285 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 GOLPH3LQ9H4A5 285 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 VEZTQ9HBM0 779 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 KIAA1468Q9P260 1216 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 CDC23Q9UJX2 597 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 MAP3K5Q99683 1374 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 CACNA1FO60840 1977 aa13.15□□□□□ -0.3
PUM3-202ENST00000397885 PNMA6EA0A0J9YXQ4 647 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 PRPF6O94906 941 aaKnown RBP13.14□□□□□ -0.31
PUM3-202ENST00000397885 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 GCFC2P16383 781 aaKnown RBP13.14□□□□□ -0.31
PUM3-202ENST00000397885 INPP5BP32019 993 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 ADD1P35611 737 aaKnown RBP13.14□□□□□ -0.31
PUM3-202ENST00000397885 LIG3P49916 1009 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 SCRN1Q12765 414 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 CRYMQ14894 314 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 NCAPHQ15003 741 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 ZNF396Q96N95 335 aaPredicted RBP13.14□□□□□ -0.31
PUM3-202ENST00000397885 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 NHSQ6T4R5 1651 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 IGSF1Q8N6C5 1336 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 RNF40O75150 1001 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 RDXP35241 583 aaKnown RBP13.14□□□□□ -0.31
PUM3-202ENST00000397885 NLRP12P59046 1061 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 NAA16Q6N069 864 aaPredicted RBP13.14□□□□□ -0.31
PUM3-202ENST00000397885 WDR93Q6P2C0 686 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 VSTM4Q8IW00 320 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 FAXDC2Q96IV6 333 aa13.14□□□□□ -0.31
PUM3-202ENST00000397885 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 A0A1W2PQD8 194 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 A6NNZ2 444 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
PUM3-202ENST00000397885 MRPL12P52815 198 aaKnown RBP13.13□□□□□ -0.31
PUM3-202ENST00000397885 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 TUBB8Q3ZCM7 444 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 PREPLQ4J6C6 727 aaPredicted RBP13.13□□□□□ -0.31
PUM3-202ENST00000397885 TEX11Q8IYF3 940 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 FMR1NBQ8N0W7 255 aaPredicted RBP13.13□□□□□ -0.31
PUM3-202ENST00000397885 SSH3Q8TE77 659 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 H3BQV1 296 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 UBTFL1P0CB47 393 aaPredicted RBP13.13□□□□□ -0.31
PUM3-202ENST00000397885 MCM3P25205 808 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms