RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 BTDP43251 543 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 CRKP46108 304 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 C9orf131Q5VYM1 1079 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 DPF2Q92785 391 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 DDRGK1Q96HY6 314 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 ZDHHC15Q96MV8 337 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 USP17L8P0C7I0 530 aa28.17■■■□□ 2.1
TSPAN4-202ENST00000397396 RNF20Q5VTR2 975 aa28.17■■■□□ 2.1
TSPAN4-202ENST00000397396 GPC2Q8N158 579 aa28.17■■■□□ 2.1
TSPAN4-202ENST00000397396 TBC1D32Q96NH3 1257 aa28.17■■■□□ 2.1
TSPAN4-202ENST00000397396 SLC4A4Q9Y6R1 1079 aa28.17■■■□□ 2.1
TSPAN4-202ENST00000397396 PATL2C9JE40 543 aaKnown RBP28.16■■■□□ 2.1
TSPAN4-202ENST00000397396 RBM25P49756 843 aaKnown RBP28.16■■■□□ 2.1
TSPAN4-202ENST00000397396 SCNN1DP51172 638 aa28.16■■■□□ 2.1
TSPAN4-202ENST00000397396 PTH1RQ03431 593 aa28.16■■■□□ 2.1
TSPAN4-202ENST00000397396 GIMAP6Q6P9H5 292 aa28.16■■■□□ 2.1
TSPAN4-202ENST00000397396 ZNF541Q9H0D2 1346 aa28.15■■■□□ 2.1
TSPAN4-202ENST00000397396 RBM8AQ9Y5S9 174 aaKnown RBP28.15■■■□□ 2.1
TSPAN4-202ENST00000397396 APPP05067 770 aa28.14■■■□□ 2.09
TSPAN4-202ENST00000397396 RBM5P52756 815 aaKnown RBP eCLIP28.14■■■□□ 2.09
TSPAN4-202ENST00000397396 DYNLL1P63167 89 aaKnown RBP28.14■■■□□ 2.09
TSPAN4-202ENST00000397396 ALX1Q15699 326 aa28.14■■■□□ 2.09
TSPAN4-202ENST00000397396 ATP8A2Q9NTI2 1148 aa28.14■■■□□ 2.09
TSPAN4-202ENST00000397396 ZBTB12Q9Y330 459 aaPredicted RBP28.14■■■□□ 2.09
TSPAN4-202ENST00000397396 GJA3Q9Y6H8 435 aa28.14■■■□□ 2.09
TSPAN4-202ENST00000397396 HSPA4P34932 840 aa28.13■■■□□ 2.09
TSPAN4-202ENST00000397396 ANAPC15P60006 121 aa28.13■■■□□ 2.09
TSPAN4-202ENST00000397396 VPS53Q5VIR6 699 aa28.13■■■□□ 2.09
TSPAN4-202ENST00000397396 ZKSCAN1P17029 563 aaPredicted RBP28.12■■■□□ 2.09
TSPAN4-202ENST00000397396 CFAP100Q494V2 611 aa28.12■■■□□ 2.09
TSPAN4-202ENST00000397396 MTMR14Q8NCE2 650 aa28.12■■■□□ 2.09
TSPAN4-202ENST00000397396 NAPBQ9H115 298 aa28.12■■■□□ 2.09
TSPAN4-202ENST00000397396 GMPSP49915 693 aaPredicted RBP28.11■■■□□ 2.09
TSPAN4-202ENST00000397396 TEX11Q8IYF3 940 aa28.11■■■□□ 2.09
TSPAN4-202ENST00000397396 GSG1L2A8MUP6 293 aa28.1■■■□□ 2.09
TSPAN4-202ENST00000397396 TDO2P48775 406 aa28.1■■■□□ 2.09
TSPAN4-202ENST00000397396 ZNF280AP59817 542 aaPredicted RBP28.1■■■□□ 2.09
TSPAN4-202ENST00000397396 NECTIN1Q15223 517 aa28.1■■■□□ 2.09
TSPAN4-202ENST00000397396 DLGAP5Q15398 846 aa28.1■■■□□ 2.09
TSPAN4-202ENST00000397396 DPY19L2Q6NUT2 758 aa28.1■■■□□ 2.09
TSPAN4-202ENST00000397396 IFNL3Q8IZI9 196 aa28.1■■■□□ 2.09
TSPAN4-202ENST00000397396 SH3RF3Q8TEJ3 882 aaPredicted RBP28.1■■■□□ 2.09
TSPAN4-202ENST00000397396 GOLGB1Q14789 3259 aaKnown RBP28.1■■■□□ 2.09
TSPAN4-202ENST00000397396 USP5P45974 858 aa28.09■■■□□ 2.09
TSPAN4-202ENST00000397396 RHBDL3P58872 404 aa28.09■■■□□ 2.09
TSPAN4-202ENST00000397396 IMMTQ16891 758 aaKnown RBP28.09■■■□□ 2.09
TSPAN4-202ENST00000397396 APOBEC3HQ6NTF7 200 aaKnown RBP28.09■■■□□ 2.09
TSPAN4-202ENST00000397396 FOXP2O15409 715 aa28.08■■■□□ 2.09
TSPAN4-202ENST00000397396 FGAP02671 866 aa28.08■■■□□ 2.09
TSPAN4-202ENST00000397396 AMOTL1Q8IY63 956 aa28.08■■■□□ 2.09
TSPAN4-202ENST00000397396 TMOD2Q9NZR1 351 aa28.08■■■□□ 2.09
TSPAN4-202ENST00000397396 SPDYE2BA6NHP3 402 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 H7C1D1 291 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 PRKAB2O43741 272 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 MYO1BO43795 1136 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 SPDYE6P0CI01 402 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 KRT32Q14532 448 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 CREB3L3Q68CJ9 461 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 IL27Q8NEV9 243 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 SDR42E1Q8WUS8 393 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 KCNB2Q92953 911 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 EPB41L4AQ9HCS5 686 aaPredicted RBP28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 TSHZ2Q9NRE2 1034 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 USP40Q9NVE5 1235 aa28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 ARPP21Q9UBL0 812 aaPredicted RBP28.07■■■□□ 2.08
TSPAN4-202ENST00000397396 MICALL2Q8IY33 904 aa28.06■■■□□ 2.08
TSPAN4-202ENST00000397396 MYOZ2Q9NPC6 264 aa28.06■■■□□ 2.08
TSPAN4-202ENST00000397396 SLC27A2O14975 620 aa28.05■■■□□ 2.08
TSPAN4-202ENST00000397396 LMOD1P29536 600 aaPredicted RBP28.05■■■□□ 2.08
TSPAN4-202ENST00000397396 CDC42EP5Q6NZY7 148 aa28.05■■■□□ 2.08
TSPAN4-202ENST00000397396 IL17RAQ96F46 866 aa28.05■■■□□ 2.08
TSPAN4-202ENST00000397396 DCP1AQ9NPI6 582 aaPredicted RBP28.05■■■□□ 2.08
TSPAN4-202ENST00000397396 CNOT7Q9UIV1 285 aaKnown RBP28.05■■■□□ 2.08
TSPAN4-202ENST00000397396 ADAMTSL1Q8N6G6 1762 aa28.04■■■□□ 2.08
TSPAN4-202ENST00000397396 ZNF213O14771 459 aa28.04■■■□□ 2.08
TSPAN4-202ENST00000397396 NPM3O75607 178 aaKnown RBP28.04■■■□□ 2.08
TSPAN4-202ENST00000397396 TSGA10IPQ3SY00 556 aa28.04■■■□□ 2.08
TSPAN4-202ENST00000397396 TGFBRAP1Q8WUH2 860 aa28.04■■■□□ 2.08
TSPAN4-202ENST00000397396 GPRC5DQ9NZD1 345 aa28.04■■■□□ 2.08
TSPAN4-202ENST00000397396 IDI2Q9BXS1 227 aa28.03■■■□□ 2.08
TSPAN4-202ENST00000397396 SBK1Q52WX2 424 aa28.02■■■□□ 2.08
TSPAN4-202ENST00000397396 FLT1P17948 1338 aa28.02■■■□□ 2.08
TSPAN4-202ENST00000397396 NAV1Q8NEY1 1877 aa28.02■■■□□ 2.08
TSPAN4-202ENST00000397396 LAMA4Q16363 1823 aa28.01■■■□□ 2.08
TSPAN4-202ENST00000397396 FOCADQ5VW36 1801 aa28.01■■■□□ 2.08
TSPAN4-202ENST00000397396 CYP21A2P08686 494 aa28.01■■■□□ 2.07
TSPAN4-202ENST00000397396 PSMA5P28066 241 aa28.01■■■□□ 2.07
TSPAN4-202ENST00000397396 ZBED3Q96IU2 234 aaPredicted RBP28.01■■■□□ 2.07
TSPAN4-202ENST00000397396 PRMT6Q96LA8 375 aaPredicted RBP28.01■■■□□ 2.07
TSPAN4-202ENST00000397396 MCM9Q9NXL9 1143 aa28.01■■■□□ 2.07
TSPAN4-202ENST00000397396 MKRN1Q9UHC7 482 aaKnown RBP28.01■■■□□ 2.07
TSPAN4-202ENST00000397396 SNX14Q9Y5W7 946 aa28.01■■■□□ 2.07
TSPAN4-202ENST00000397396 ECM29Q5VYK3 1845 aa28.01■■■□□ 2.07
TSPAN4-202ENST00000397396 WDHD1O75717 1129 aaPredicted RBP28■■■□□ 2.07
TSPAN4-202ENST00000397396 DDNO94850 711 aaPredicted RBP28■■■□□ 2.07
TSPAN4-202ENST00000397396 SLC3A2P08195 630 aaKnown RBP28■■■□□ 2.07
TSPAN4-202ENST00000397396 FKBP1CQ5VVH2 108 aa28■■■□□ 2.07
TSPAN4-202ENST00000397396 MAPKAPK5Q8IW41 473 aa28■■■□□ 2.07
TSPAN4-202ENST00000397396 L3MBTL3Q96JM7 780 aaPredicted RBP28■■■□□ 2.07
TSPAN4-202ENST00000397396 KIF4BQ2VIQ3 1234 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms