RNA–Protein interactions for RNA: ENST00000397305.3

RBFOX2-204, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 5

Gene RBFOX2, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-204ENST00000397305 SPATS2LQ9NUQ6 558 aaKnown RBP12.35□□□□□ -0.43
RBFOX2-204ENST00000397305 TRMT112Q9UI30 125 aaKnown RBP12.35□□□□□ -0.43
RBFOX2-204ENST00000397305 RREB1Q92766 1687 aa12.35□□□□□ -0.43
RBFOX2-204ENST00000397305 SALL3Q9BXA9 1300 aa12.35□□□□□ -0.43
RBFOX2-204ENST00000397305 TESPA1A2RU30 521 aaPredicted RBP12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 TPD52L2O43399 206 aaKnown RBP12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 ONECUT3O60422 494 aaPredicted RBP12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 GLRX3O76003 335 aaKnown RBP12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 TMED1Q13445 227 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 CRYMQ14894 314 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 CCDC57Q2TAC2 916 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 FAM182BQ5T319 152 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 GJC2Q5T442 439 aaPredicted RBP12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 ZNF772Q68DY9 489 aaPredicted RBP12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 NLRP10Q86W26 655 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 KLHDC4Q8TBB5 520 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 C17orf50Q8WW18 174 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 ECHDC1Q9NTX5 307 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 CCNL1Q9UK58 526 aaPredicted RBP12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 NUP98P52948 1817 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 CDHR2Q9BYE9 1310 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 CNTNAP4Q9C0A0 1308 aa12.34□□□□□ -0.43
RBFOX2-204ENST00000397305 RDXP35241 583 aaKnown RBP12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 RFX5P48382 616 aaPredicted RBP12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 ZRSR1Q15695 479 aaKnown RBP12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 PARP10Q53GL7 1025 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 GORABQ5T7V8 394 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 SAMD3Q8N6K7 520 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 LINC00116Q8NCU8 138 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 GPT2Q8TD30 523 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 KCNV2Q8TDN2 545 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 TSC1Q92574 1164 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 FAM89AQ96GI7 184 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 RMDN2Q96LZ7 410 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 FAM107BQ9H098 131 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 GOPCQ9HD26 462 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 BLOC1S6Q9UL45 172 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 AKAP2Q9Y2D5 859 aa12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 COL5A3P25940 1745 aaPredicted RBP12.33□□□□□ -0.44
RBFOX2-204ENST00000397305 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 TRIM66O15016 1216 aa12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 RPS6KA5O75582 802 aa12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 SASH1O94885 1247 aa12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 SNUPNO95149 360 aaKnown RBP12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 MYBL2P10244 700 aa12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 PAX3P23760 479 aa12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 IL15P40933 162 aaPredicted RBP12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 RHBDL3P58872 404 aa12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 IFIT5Q13325 482 aaKnown RBP12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 FAM196AQ6ZSG2 479 aa12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 KRT27Q7Z3Y8 459 aa12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 APBB1IPQ7Z5R6 666 aaPredicted RBP12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 ARMC2Q8NEN0 867 aa12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 CRACR2AQ9BSW2 395 aa12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 POLR3CQ9BUI4 534 aaPredicted RBP12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 PLA2G12BQ9BX93 195 aa12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 GNL3LQ9NVN8 582 aaKnown RBP12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 USP42Q9H9J4 1324 aaKnown RBP12.32□□□□□ -0.44
RBFOX2-204ENST00000397305 EPB41L2O43491 1005 aaKnown RBP12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 ATP8B1O43520 1251 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 CAMTA2O94983 1202 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 GCFC2P16383 781 aaKnown RBP12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 NAT1P18440 290 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 CHMLP26374 656 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 ALDH1B1P30837 517 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 TFCP2Q12800 502 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 RAB3GAP1Q15042 981 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 ZNF34Q8IZ26 560 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 GIMAP7Q8NHV1 300 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 UTP14AQ9BVJ6 771 aaKnown RBP12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 RMI1Q9H9A7 625 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 NIP7Q9Y221 180 aaKnown RBP eCLIP12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 SH3TC1Q8TE82 1336 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 AK9Q5TCS8 1911 aa12.31□□□□□ -0.44
RBFOX2-204ENST00000397305 FAM177BA6PVY3 158 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 KIF2AO00139 706 aaPredicted RBP12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 EYA2O00167 538 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 IPO5O00410 1097 aaKnown RBP12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 GNPATO15228 680 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 PDE8AO60658 829 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 CIAO1O76071 339 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 VDRP11473 427 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 HMGB2P26583 209 aaKnown RBP12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 CTSWP56202 376 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 FOXD4Q12950 439 aaPredicted RBP12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 TBC1D25Q3MII6 688 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 TNNI3KQ59H18 835 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 NAIF1Q69YI7 327 aaPredicted RBP12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 TDRD7Q8NHU6 1098 aaKnown RBP12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 PI4K2BQ8TCG2 481 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 TCP11Q8WWU5 503 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 AK7Q96M32 723 aa12.3□□□□□ -0.44
RBFOX2-204ENST00000397305 TRIM6Q9C030 488 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms