RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ZBTB7BO15156 539 aaPredicted RBP16.94■□□□□ 0.3
CXCL12-205ENST00000395794 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
CXCL12-205ENST00000395794 ALDH1A1P00352 501 aa16.94■□□□□ 0.3
CXCL12-205ENST00000395794 DGKZQ13574 1117 aa16.94■□□□□ 0.3
CXCL12-205ENST00000395794 RASGRF1Q13972 1273 aa16.94■□□□□ 0.3
CXCL12-205ENST00000395794 DIXDC1Q155Q3 683 aa16.94■□□□□ 0.3
CXCL12-205ENST00000395794 C1orf115Q9H7X2 142 aa16.94■□□□□ 0.3
CXCL12-205ENST00000395794 DAGLAQ9Y4D2 1042 aa16.94■□□□□ 0.3
CXCL12-205ENST00000395794 RLBP1P12271 317 aa16.93■□□□□ 0.3
CXCL12-205ENST00000395794 MAP3K9P80192 1104 aa16.93■□□□□ 0.3
CXCL12-205ENST00000395794 POLA2Q14181 598 aa16.93■□□□□ 0.3
CXCL12-205ENST00000395794 DCAF15Q66K64 600 aa16.93■□□□□ 0.3
CXCL12-205ENST00000395794 OTUD7BQ6GQQ9 843 aa16.93■□□□□ 0.3
CXCL12-205ENST00000395794 SSH3Q8TE77 659 aa16.93■□□□□ 0.3
CXCL12-205ENST00000395794 USP40Q9NVE5 1235 aa16.93■□□□□ 0.3
CXCL12-205ENST00000395794 TBC1D8O95759 1140 aa16.92■□□□□ 0.3
CXCL12-205ENST00000395794 UQCRFS1P1P0C7P4 283 aa16.92■□□□□ 0.3
CXCL12-205ENST00000395794 CDC42EP5Q6NZY7 148 aa16.92■□□□□ 0.3
CXCL12-205ENST00000395794 ERICH6Q7L0X2 663 aa16.92■□□□□ 0.3
CXCL12-205ENST00000395794 CDAN1Q8IWY9 1227 aa16.92■□□□□ 0.3
CXCL12-205ENST00000395794 PANK1Q8TE04 598 aa16.92■□□□□ 0.3
CXCL12-205ENST00000395794 FAM151AQ8WW52 585 aa16.92■□□□□ 0.3
CXCL12-205ENST00000395794 ELP3Q9H9T3 547 aa16.92■□□□□ 0.3
CXCL12-205ENST00000395794 CCDC158Q5M9N0 1113 aa16.91■□□□□ 0.3
CXCL12-205ENST00000395794 SPATA5Q8NB90 893 aa16.91■□□□□ 0.3
CXCL12-205ENST00000395794 OPTNQ96CV9 577 aa16.91■□□□□ 0.3
CXCL12-205ENST00000395794 MCOLN1Q9GZU1 580 aa16.91■□□□□ 0.3
CXCL12-205ENST00000395794 GPR108Q9NPR9 543 aa16.91■□□□□ 0.3
CXCL12-205ENST00000395794 AKAP11Q9UKA4 1901 aa16.9■□□□□ 0.3
CXCL12-205ENST00000395794 CCDC85CA6NKD9 419 aa16.9■□□□□ 0.3
CXCL12-205ENST00000395794 GSTO1P78417 241 aa16.9■□□□□ 0.3
CXCL12-205ENST00000395794 TCP10Q12799 353 aa16.9■□□□□ 0.3
CXCL12-205ENST00000395794 IFNL1Q8IU54 200 aa16.9■□□□□ 0.3
CXCL12-205ENST00000395794 CHMP4BQ9H444 224 aaKnown RBP16.9■□□□□ 0.3
CXCL12-205ENST00000395794 HMG20BQ9P0W2 317 aa16.9■□□□□ 0.3
CXCL12-205ENST00000395794 MYH13Q9UKX3 1938 aa16.9■□□□□ 0.3
CXCL12-205ENST00000395794 LDHCP07864 332 aa16.89■□□□□ 0.29
CXCL12-205ENST00000395794 VGLL4Q14135 290 aa16.89■□□□□ 0.29
CXCL12-205ENST00000395794 TNNI3KQ59H18 835 aa16.89■□□□□ 0.29
CXCL12-205ENST00000395794 TTC39AQ5SRH9 613 aa16.89■□□□□ 0.29
CXCL12-205ENST00000395794 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.89■□□□□ 0.29
CXCL12-205ENST00000395794 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.89■□□□□ 0.29
CXCL12-205ENST00000395794 WRNIP1Q96S55 665 aa16.89■□□□□ 0.29
CXCL12-205ENST00000395794 ZNF341Q9BYN7 854 aa16.89■□□□□ 0.29
CXCL12-205ENST00000395794 RCAN3Q9UKA8 241 aa16.89■□□□□ 0.29
CXCL12-205ENST00000395794 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
CXCL12-205ENST00000395794 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.89■□□□□ 0.29
CXCL12-205ENST00000395794 FPGT-TNNI3KV9GXZ4 949 aa16.89■□□□□ 0.29
CXCL12-205ENST00000395794 RPAP1Q9BWH6 1393 aaPredicted RBP16.89■□□□□ 0.29
CXCL12-205ENST00000395794 GPR25O00155 361 aa16.88■□□□□ 0.29
CXCL12-205ENST00000395794 ARID4AP29374 1257 aaPredicted RBP16.88■□□□□ 0.29
CXCL12-205ENST00000395794 NOM1Q5C9Z4 860 aaKnown RBP16.88■□□□□ 0.29
CXCL12-205ENST00000395794 CTU1Q7Z7A3 348 aaKnown RBP16.88■□□□□ 0.29
CXCL12-205ENST00000395794 FAM163AQ96GL9 167 aaPredicted RBP16.88■□□□□ 0.29
CXCL12-205ENST00000395794 CFHR5Q9BXR6 569 aa16.88■□□□□ 0.29
CXCL12-205ENST00000395794 RAI14Q9P0K7 980 aa16.88■□□□□ 0.29
CXCL12-205ENST00000395794 LRP2BPQ9P2M1 347 aa16.88■□□□□ 0.29
CXCL12-205ENST00000395794 GTF2A2P52657 109 aa16.87■□□□□ 0.29
CXCL12-205ENST00000395794 MECOMQ03112 1051 aa16.87■□□□□ 0.29
CXCL12-205ENST00000395794 NFIAQ12857 509 aa16.87■□□□□ 0.29
CXCL12-205ENST00000395794 CEP85Q6P2H3 762 aa16.87■□□□□ 0.29
CXCL12-205ENST00000395794 MIGA2Q7L4E1 593 aa16.87■□□□□ 0.29
CXCL12-205ENST00000395794 ERC1Q8IUD2 1116 aa16.87■□□□□ 0.29
CXCL12-205ENST00000395794 ZSCAN29Q8IWY8 852 aaPredicted RBP16.87■□□□□ 0.29
CXCL12-205ENST00000395794 ZNF296Q8WUU4 475 aaPredicted RBP16.87■□□□□ 0.29
CXCL12-205ENST00000395794 OTUD5Q96G74 571 aa16.87■□□□□ 0.29
CXCL12-205ENST00000395794 DDX19BQ9UMR2 479 aa16.87■□□□□ 0.29
CXCL12-205ENST00000395794 GAKO14976 1311 aa16.87■□□□□ 0.29
CXCL12-205ENST00000395794 FKTNO75072 461 aa16.86■□□□□ 0.29
CXCL12-205ENST00000395794 ENTPD3O75355 529 aa16.86■□□□□ 0.29
CXCL12-205ENST00000395794 WDHD1O75717 1129 aaPredicted RBP16.86■□□□□ 0.29
CXCL12-205ENST00000395794 GJA5P36382 358 aa16.86■□□□□ 0.29
CXCL12-205ENST00000395794 BTDP43251 543 aa16.86■□□□□ 0.29
CXCL12-205ENST00000395794 HSP90AB4PQ58FF6 505 aa16.86■□□□□ 0.29
CXCL12-205ENST00000395794 TBC1D9Q6ZT07 1266 aa16.86■□□□□ 0.29
CXCL12-205ENST00000395794 ERO1BQ86YB8 467 aa16.86■□□□□ 0.29
CXCL12-205ENST00000395794 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.86■□□□□ 0.29
CXCL12-205ENST00000395794 ZKSCAN4Q969J2 545 aaPredicted RBP16.86■□□□□ 0.29
CXCL12-205ENST00000395794 NOL10Q9BSC4 688 aaKnown RBP16.86■□□□□ 0.29
CXCL12-205ENST00000395794 IDI2Q9BXS1 227 aa16.86■□□□□ 0.29
CXCL12-205ENST00000395794 MROH7-TTC4A0A0A0MT08 1334 aa16.86■□□□□ 0.29
CXCL12-205ENST00000395794 CASP8AP2Q9UKL3 1982 aa16.86■□□□□ 0.29
CXCL12-205ENST00000395794 SPDYE5A6NIY4 337 aa16.85■□□□□ 0.29
CXCL12-205ENST00000395794 IGF2BP3O00425 579 aaKnown RBP eCLIP16.85■□□□□ 0.29
CXCL12-205ENST00000395794 HMMRO75330 724 aa16.85■□□□□ 0.29
CXCL12-205ENST00000395794 MCAMP43121 646 aa16.85■□□□□ 0.29
CXCL12-205ENST00000395794 RGS3P49796 1198 aa16.85■□□□□ 0.29
CXCL12-205ENST00000395794 PKN2Q16513 984 aaKnown RBP16.85■□□□□ 0.29
CXCL12-205ENST00000395794 PI16Q6UXB8 463 aa16.85■□□□□ 0.29
CXCL12-205ENST00000395794 DBNDD2Q9BQY9 259 aa16.85■□□□□ 0.29
CXCL12-205ENST00000395794 FAM198AQ9UFP1 575 aa16.85■□□□□ 0.29
CXCL12-205ENST00000395794 COG6Q9Y2V7 657 aa16.85■□□□□ 0.29
CXCL12-205ENST00000395794 GPR75-ASB3A0A0A6YYF3 556 aa16.84■□□□□ 0.29
CXCL12-205ENST00000395794 CCL15-CCL14A0A0B4J2E2 113 aa16.84■□□□□ 0.29
CXCL12-205ENST00000395794 TESPA1A2RU30 521 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-205ENST00000395794 MAP4K4O95819 1239 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-205ENST00000395794 PICALMQ13492 652 aa16.84■□□□□ 0.29
CXCL12-205ENST00000395794 CCL15Q16663 113 aa16.84■□□□□ 0.29
CXCL12-205ENST00000395794 SNRKQ9NRH2 765 aa16.84■□□□□ 0.29
CXCL12-205ENST00000395794 SNCAIPQ9Y6H5 919 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms