RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 IARSP41252 1262 aaKnown RBP15.18■□□□□ 0.02
NFKB1-202ENST00000394820 KCNQ4P56696 695 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 TCIRG1Q13488 830 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 AIDAQ96BJ3 306 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 CENPHQ9H3R5 247 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 GREM2Q9H772 168 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 ARFGAP3Q9NP61 516 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 SRCAPQ6ZRS2 3230 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 B4E1Z4 1266 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 SLC9C2Q5TAH2 1124 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 CCDC102BQ68D86 513 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 GRAMD1CQ8IYS0 662 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 TDRD7Q8NHU6 1098 aaKnown RBP15.18■□□□□ 0.02
NFKB1-202ENST00000394820 PLIN2Q99541 437 aa15.18■□□□□ 0.02
NFKB1-202ENST00000394820 CCT6AP40227 531 aaKnown RBP15.17■□□□□ 0.02
NFKB1-202ENST00000394820 DHX58Q96C10 678 aa15.17■□□□□ 0.02
NFKB1-202ENST00000394820 CAPZA3Q96KX2 299 aa15.17■□□□□ 0.02
NFKB1-202ENST00000394820 AK7Q96M32 723 aa15.17■□□□□ 0.02
NFKB1-202ENST00000394820 FANCLQ9NW38 375 aa15.17■□□□□ 0.02
NFKB1-202ENST00000394820 KCNJ14Q9UNX9 436 aa15.17■□□□□ 0.02
NFKB1-202ENST00000394820 IRS4O14654 1257 aaPredicted RBP15.17■□□□□ 0.02
NFKB1-202ENST00000394820 CBFA2T2O43439 604 aa15.17■□□□□ 0.02
NFKB1-202ENST00000394820 LRRN4CLQ8ND94 238 aa15.17■□□□□ 0.02
NFKB1-202ENST00000394820 ZBTB1Q9Y2K1 713 aa15.17■□□□□ 0.02
NFKB1-202ENST00000394820 MAST3O60307 1309 aa15.17■□□□□ 0.02
NFKB1-202ENST00000394820 ERVV-2B6SEH9 535 aa15.16■□□□□ 0.02
NFKB1-202ENST00000394820 ZSCAN12O43309 604 aa15.16■□□□□ 0.02
NFKB1-202ENST00000394820 LRRFIP1Q32MZ4 808 aaKnown RBP15.16■□□□□ 0.02
NFKB1-202ENST00000394820 TMEM67Q5HYA8 995 aa15.16■□□□□ 0.02
NFKB1-202ENST00000394820 INCENPQ9NQS7 918 aa15.16■□□□□ 0.02
NFKB1-202ENST00000394820 EXOC5O00471 708 aa15.16■□□□□ 0.02
NFKB1-202ENST00000394820 IPO7O95373 1038 aaKnown RBP15.16■□□□□ 0.02
NFKB1-202ENST00000394820 RABL6Q3YEC7 729 aaPredicted RBP15.16■□□□□ 0.02
NFKB1-202ENST00000394820 LRP10Q7Z4F1 713 aa15.16■□□□□ 0.02
NFKB1-202ENST00000394820 KIAA1468Q9P260 1216 aa15.16■□□□□ 0.02
NFKB1-202ENST00000394820 MST1RQ04912 1400 aa15.16■□□□□ 0.02
NFKB1-202ENST00000394820 TNS3Q68CZ2 1445 aa15.16■□□□□ 0.02
NFKB1-202ENST00000394820 COL15A1P39059 1388 aa15.16■□□□□ 0.02
NFKB1-202ENST00000394820 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.16■□□□□ 0.02
NFKB1-202ENST00000394820 ANKRD18BA2A2Z9 1011 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 KIF2AO00139 706 aaPredicted RBP15.15■□□□□ 0.02
NFKB1-202ENST00000394820 CAPN2P17655 700 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 ZNF569Q5MCW4 686 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 TMEM87AQ8NBN3 555 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 CCDC150Q8NCX0 1101 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 MPHOSPH8Q99549 860 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 NUP88Q99567 741 aaPredicted RBP15.15■□□□□ 0.02
NFKB1-202ENST00000394820 AKAP2Q9Y2D5 859 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 TCHHQ07283 1943 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 HMGB1P09429 215 aaKnown RBP15.15■□□□□ 0.02
NFKB1-202ENST00000394820 OAS2P29728 719 aaKnown RBP15.15■□□□□ 0.02
NFKB1-202ENST00000394820 RESTQ13127 1097 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 WWC2Q6AWC2 1192 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 NSUN7Q8NE18 718 aaKnown RBP15.15■□□□□ 0.02
NFKB1-202ENST00000394820 PPP1R13BQ96KQ4 1090 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 PUS7LQ9H0K6 701 aaKnown RBP15.15■□□□□ 0.02
NFKB1-202ENST00000394820 PFKFB1P16118 471 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 CLCN6P51797 869 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 FILIP1LQ4L180 1135 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 SMIM5Q71RC9 77 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 VPS37DQ86XT2 251 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 TRIM22Q8IYM9 498 aa15.15■□□□□ 0.02
NFKB1-202ENST00000394820 PIP4K2BP78356 416 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 DZIP3Q86Y13 1208 aaKnown RBP15.14■□□□□ 0.01
NFKB1-202ENST00000394820 NAPBQ9H115 298 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 SLC12A7Q9Y666 1083 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 CHD2O14647 1828 aaKnown RBP15.14■□□□□ 0.01
NFKB1-202ENST00000394820 TMEM232C9JQI7 657 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 CCDC24Q8N4L8 307 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 MIGA1Q8NAN2 632 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 NCOA7Q8NI08 942 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 KCNG4Q8TDN1 519 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 IRX2Q9BZI1 471 aaPredicted RBP15.14■□□□□ 0.01
NFKB1-202ENST00000394820 POLR2DO15514 142 aaKnown RBP15.14■□□□□ 0.01
NFKB1-202ENST00000394820 KIF5CO60282 957 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 FGAP02671 866 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 CASP7P55210 303 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 PPP2R3AQ06190 1150 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 ANO1Q5XXA6 986 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 DDX41Q9UJV9 622 aaKnown RBP15.14■□□□□ 0.01
NFKB1-202ENST00000394820 DENND2AQ9ULE3 1009 aa15.14■□□□□ 0.01
NFKB1-202ENST00000394820 GOLGB1Q14789 3259 aaKnown RBP15.13■□□□□ 0.01
NFKB1-202ENST00000394820 GPAA1O43292 621 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 TERF2Q15554 542 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.13■□□□□ 0.01
NFKB1-202ENST00000394820 BAG1Q99933 345 aaPredicted RBP15.13■□□□□ 0.01
NFKB1-202ENST00000394820 CARD10Q9BWT7 1032 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 NFE2L3Q9Y4A8 694 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 MED23Q9ULK4 1368 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 CASP1P29466 404 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 PDIA3P30101 505 aaKnown RBP15.13■□□□□ 0.01
NFKB1-202ENST00000394820 CCP110O43303 1012 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 ZMYM1Q5SVZ6 1142 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 ANKRD20A12PQ8NF67 263 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 SMARCE1Q969G3 411 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 PSMB7Q99436 277 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 FAM107BQ9H098 131 aa15.13■□□□□ 0.01
NFKB1-202ENST00000394820 RANBP6O60518 1105 aaKnown RBP15.12■□□□□ 0.01
NFKB1-202ENST00000394820 HNRNPH2P55795 449 aaKnown RBP15.12■□□□□ 0.01
NFKB1-202ENST00000394820 SMYD4Q8IYR2 804 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms