RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 CEMIPQ8WUJ3 1361 aa18.42■□□□□ 0.54
PDZD4-202ENST00000393758 FDPSP14324 419 aaKnown RBP18.42■□□□□ 0.54
PDZD4-202ENST00000393758 ZNF569Q5MCW4 686 aa18.42■□□□□ 0.54
PDZD4-202ENST00000393758 ARHGEF25Q86VW2 580 aa18.42■□□□□ 0.54
PDZD4-202ENST00000393758 PUS7LQ9H0K6 701 aaKnown RBP18.42■□□□□ 0.54
PDZD4-202ENST00000393758 ANGEL1Q9UNK9 670 aaKnown RBP18.42■□□□□ 0.54
PDZD4-202ENST00000393758 ITSN1Q15811 1721 aa18.42■□□□□ 0.54
PDZD4-202ENST00000393758 TULP1O00294 542 aaPredicted RBP18.42■□□□□ 0.54
PDZD4-202ENST00000393758 TRIM34Q9BYJ4 488 aa18.42■□□□□ 0.54
PDZD4-202ENST00000393758 INCENPQ9NQS7 918 aa18.42■□□□□ 0.54
PDZD4-202ENST00000393758 VPS18Q9P253 973 aa18.42■□□□□ 0.54
PDZD4-202ENST00000393758 KIF23Q02241 960 aaPredicted RBP18.42■□□□□ 0.54
PDZD4-202ENST00000393758 CCDC191Q8NCU4 936 aa18.42■□□□□ 0.54
PDZD4-202ENST00000393758 RAI14Q9P0K7 980 aa18.42■□□□□ 0.54
PDZD4-202ENST00000393758 ABCF2Q9UG63 623 aa18.42■□□□□ 0.54
PDZD4-202ENST00000393758 SMC1AQ14683 1233 aaKnown RBP18.41■□□□□ 0.54
PDZD4-202ENST00000393758 CAGE1Q8TC20 777 aa18.41■□□□□ 0.54
PDZD4-202ENST00000393758 SRRTQ9BXP5 876 aaKnown RBP18.41■□□□□ 0.54
PDZD4-202ENST00000393758 PTPRUQ92729 1446 aa18.41■□□□□ 0.54
PDZD4-202ENST00000393758 WDHD1O75717 1129 aaPredicted RBP18.41■□□□□ 0.54
PDZD4-202ENST00000393758 PDIA6Q15084 440 aa18.41■□□□□ 0.54
PDZD4-202ENST00000393758 UBAC1Q9BSL1 405 aa18.41■□□□□ 0.54
PDZD4-202ENST00000393758 OSBPL5Q9H0X9 879 aaPredicted RBP18.41■□□□□ 0.54
PDZD4-202ENST00000393758 FOXN1O15353 648 aa18.41■□□□□ 0.54
PDZD4-202ENST00000393758 ARHGAP6O43182 974 aa18.41■□□□□ 0.54
PDZD4-202ENST00000393758 CCT6AP40227 531 aaKnown RBP18.41■□□□□ 0.54
PDZD4-202ENST00000393758 NBPF11Q86T75 865 aa18.41■□□□□ 0.54
PDZD4-202ENST00000393758 GOLGA1Q92805 767 aa18.41■□□□□ 0.54
PDZD4-202ENST00000393758 NUP88Q99567 741 aaPredicted RBP18.41■□□□□ 0.54
PDZD4-202ENST00000393758 ALDH8A1Q9H2A2 487 aaPredicted RBP18.41■□□□□ 0.54
PDZD4-202ENST00000393758 ZFYP08048 801 aaPredicted RBP18.4■□□□□ 0.54
PDZD4-202ENST00000393758 HNRNPH2P55795 449 aaKnown RBP18.4■□□□□ 0.54
PDZD4-202ENST00000393758 KRI1Q8N9T8 703 aaKnown RBP18.4■□□□□ 0.54
PDZD4-202ENST00000393758 APPBP2Q92624 585 aa18.4■□□□□ 0.54
PDZD4-202ENST00000393758 POLR3EQ9NVU0 708 aa18.4■□□□□ 0.54
PDZD4-202ENST00000393758 BTBD18B2RXH4 712 aa18.4■□□□□ 0.54
PDZD4-202ENST00000393758 ERLIN1O75477 346 aa18.4■□□□□ 0.54
PDZD4-202ENST00000393758 PHKG2P15735 406 aa18.4■□□□□ 0.54
PDZD4-202ENST00000393758 SERTAD1Q9UHV2 236 aa18.4■□□□□ 0.54
PDZD4-202ENST00000393758 CTDSPL2Q05D32 466 aa18.4■□□□□ 0.54
PDZD4-202ENST00000393758 CCDC175P0C221 793 aa18.39■□□□□ 0.54
PDZD4-202ENST00000393758 EXOSC10Q01780 885 aaKnown RBP18.39■□□□□ 0.54
PDZD4-202ENST00000393758 SLC39A14Q15043 492 aa18.39■□□□□ 0.54
PDZD4-202ENST00000393758 DIS3L2Q8IYB7 885 aaKnown RBP18.39■□□□□ 0.54
PDZD4-202ENST00000393758 PRDM11Q9NQV5 511 aa18.39■□□□□ 0.54
PDZD4-202ENST00000393758 DENND2AQ9ULE3 1009 aa18.39■□□□□ 0.54
PDZD4-202ENST00000393758 COL15A1P39059 1388 aa18.39■□□□□ 0.54
PDZD4-202ENST00000393758 SH3TC1Q8TE82 1336 aa18.39■□□□□ 0.53
PDZD4-202ENST00000393758 KLHL34Q8N239 644 aa18.39■□□□□ 0.53
PDZD4-202ENST00000393758 CABP5Q9NP86 173 aa18.39■□□□□ 0.53
PDZD4-202ENST00000393758 IPO7O95373 1038 aaKnown RBP18.39■□□□□ 0.53
PDZD4-202ENST00000393758 IRX2Q9BZI1 471 aaPredicted RBP18.39■□□□□ 0.53
PDZD4-202ENST00000393758 MAPK8IP1Q9UQF2 711 aa18.39■□□□□ 0.53
PDZD4-202ENST00000393758 DCAF5Q96JK2 942 aa18.38■□□□□ 0.53
PDZD4-202ENST00000393758 LRP2BPQ9P2M1 347 aa18.38■□□□□ 0.53
PDZD4-202ENST00000393758 N4BP3O15049 544 aa18.38■□□□□ 0.53
PDZD4-202ENST00000393758 XBP1P17861 261 aa18.38■□□□□ 0.53
PDZD4-202ENST00000393758 CAPN2P17655 700 aa18.38■□□□□ 0.53
PDZD4-202ENST00000393758 MIGA1Q8NAN2 632 aa18.38■□□□□ 0.53
PDZD4-202ENST00000393758 GOLGA6L9A6NEM1 432 aa18.37■□□□□ 0.53
PDZD4-202ENST00000393758 EIF3JO75822 258 aaKnown RBP18.37■□□□□ 0.53
PDZD4-202ENST00000393758 SLC4A8Q2Y0W8 1093 aa18.37■□□□□ 0.53
PDZD4-202ENST00000393758 ILDR1Q86SU0 546 aaPredicted RBP18.37■□□□□ 0.53
PDZD4-202ENST00000393758 TXLNBQ8N3L3 684 aa18.37■□□□□ 0.53
PDZD4-202ENST00000393758 TECPR2O15040 1411 aa18.37■□□□□ 0.53
PDZD4-202ENST00000393758 SCARF1Q14162 830 aa18.37■□□□□ 0.53
PDZD4-202ENST00000393758 AXDND1Q5T1B0 1012 aaPredicted RBP18.37■□□□□ 0.53
PDZD4-202ENST00000393758 IGSF22Q8N9C0 903 aa18.37■□□□□ 0.53
PDZD4-202ENST00000393758 TRMT112Q9UI30 125 aaKnown RBP18.37■□□□□ 0.53
PDZD4-202ENST00000393758 POSTNQ15063 836 aa18.37■□□□□ 0.53
PDZD4-202ENST00000393758 SPECC1LQ69YQ0 1117 aa18.37■□□□□ 0.53
PDZD4-202ENST00000393758 MFSD6Q6ZSS7 791 aa18.37■□□□□ 0.53
PDZD4-202ENST00000393758 WDR24Q96S15 920 aa18.37■□□□□ 0.53
PDZD4-202ENST00000393758 NACAP1Q9BZK3 213 aa18.37■□□□□ 0.53
PDZD4-202ENST00000393758 SAMSN1Q9NSI8 373 aaKnown RBP18.37■□□□□ 0.53
PDZD4-202ENST00000393758 CHMP4BP1P59074 171 aa18.36■□□□□ 0.53
PDZD4-202ENST00000393758 RTN1Q16799 776 aa18.36■□□□□ 0.53
PDZD4-202ENST00000393758 WASF1Q92558 559 aa18.36■□□□□ 0.53
PDZD4-202ENST00000393758 GDAP1L1Q96MZ0 367 aa18.36■□□□□ 0.53
PDZD4-202ENST00000393758 EFCAB8A8MWE9 144 aa18.36■□□□□ 0.53
PDZD4-202ENST00000393758 UBE2Q2LH0YL09 131 aa18.36■□□□□ 0.53
PDZD4-202ENST00000393758 RFX5P48382 616 aaPredicted RBP18.36■□□□□ 0.53
PDZD4-202ENST00000393758 TOGARAM2Q6ZUX3 1019 aa18.36■□□□□ 0.53
PDZD4-202ENST00000393758 MPHOSPH8Q99549 860 aa18.36■□□□□ 0.53
PDZD4-202ENST00000393758 AKR1B15C9JRZ8 316 aaPredicted RBP18.36■□□□□ 0.53
PDZD4-202ENST00000393758 SMYD4Q8IYR2 804 aaPredicted RBP18.36■□□□□ 0.53
PDZD4-202ENST00000393758 RANBP6O60518 1105 aaKnown RBP18.35■□□□□ 0.53
PDZD4-202ENST00000393758 WTAPQ15007 396 aa18.35■□□□□ 0.53
PDZD4-202ENST00000393758 HINFPQ9BQA5 517 aa18.35■□□□□ 0.53
PDZD4-202ENST00000393758 VPS16Q9H269 839 aa18.35■□□□□ 0.53
PDZD4-202ENST00000393758 ZNF446Q9NWS9 450 aa18.35■□□□□ 0.53
PDZD4-202ENST00000393758 PEAK1Q9H792 1746 aa18.35■□□□□ 0.53
PDZD4-202ENST00000393758 TUBB4AP04350 444 aa18.35■□□□□ 0.53
PDZD4-202ENST00000393758 CASP1P29466 404 aa18.35■□□□□ 0.53
PDZD4-202ENST00000393758 NUTM2AQ8IVF1 878 aaPredicted RBP18.35■□□□□ 0.53
PDZD4-202ENST00000393758 PARD6BQ9BYG5 372 aa18.35■□□□□ 0.53
PDZD4-202ENST00000393758 MROH7-TTC4A0A0A0MT08 1334 aa18.34■□□□□ 0.53
PDZD4-202ENST00000393758 CUTAO60888 179 aa18.34■□□□□ 0.53
PDZD4-202ENST00000393758 MTF1Q14872 753 aa18.34■□□□□ 0.53
PDZD4-202ENST00000393758 SHC4Q6S5L8 630 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms