RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 CAMTA2O94983 1202 aa13.07□□□□□ -0.32
SPOP-202ENST00000393328 PDCP20941 246 aa13.07□□□□□ -0.32
SPOP-202ENST00000393328 ST5P78524 1137 aa13.07□□□□□ -0.32
SPOP-202ENST00000393328 DHX40Q8IX18 779 aaKnown RBP13.07□□□□□ -0.32
SPOP-202ENST00000393328 ZSWIM4Q9H7M6 989 aa13.07□□□□□ -0.32
SPOP-202ENST00000393328 SPATA31A5Q5VU36 1347 aa13.06□□□□□ -0.32
SPOP-202ENST00000393328 SPATA31A7Q8IWB4 1347 aa13.06□□□□□ -0.32
SPOP-202ENST00000393328 GNL2Q13823 731 aaKnown RBP13.06□□□□□ -0.32
SPOP-202ENST00000393328 ERO1AQ96HE7 468 aa13.06□□□□□ -0.32
SPOP-202ENST00000393328 USP28Q96RU2 1077 aa13.06□□□□□ -0.32
SPOP-202ENST00000393328 DSCC1Q9BVC3 393 aa13.06□□□□□ -0.32
SPOP-202ENST00000393328 SRP68Q9UHB9 627 aaKnown RBP13.06□□□□□ -0.32
SPOP-202ENST00000393328 ZNF532Q9HCE3 1301 aa13.06□□□□□ -0.32
SPOP-202ENST00000393328 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
SPOP-202ENST00000393328 TSGA10IPQ3SY00 556 aa13.06□□□□□ -0.32
SPOP-202ENST00000393328 E4F1Q66K89 784 aaPredicted RBP13.06□□□□□ -0.32
SPOP-202ENST00000393328 SLC51AQ86UW1 340 aa13.06□□□□□ -0.32
SPOP-202ENST00000393328 FSIP1Q8NA03 581 aa13.06□□□□□ -0.32
SPOP-202ENST00000393328 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
SPOP-202ENST00000393328 KINO60870 393 aaKnown RBP13.05□□□□□ -0.32
SPOP-202ENST00000393328 URI1O94763 535 aaPredicted RBP13.05□□□□□ -0.32
SPOP-202ENST00000393328 LMOD1P29536 600 aaPredicted RBP13.05□□□□□ -0.32
SPOP-202ENST00000393328 TAF3Q5VWG9 929 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 VGLL2Q8N8G2 317 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 MIGA1Q8NAN2 632 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 XPO4Q9C0E2 1151 aaKnown RBP13.05□□□□□ -0.32
SPOP-202ENST00000393328 JAG2Q9Y219 1238 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 CDHR2Q9BYE9 1310 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 PTPDC1A2A3K4 754 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 CTDNEP1O95476 244 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 DPCR1Q3MIW9 517 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 CCDC73Q6ZRK6 1079 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.05□□□□□ -0.32
SPOP-202ENST00000393328 MAGEB6Q8N7X4 407 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 APPBP2Q92624 585 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 PPP1R13BQ96KQ4 1090 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 JCADQ9P266 1359 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 ERVV-1B6SEH8 477 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 POLR3DP05423 398 aaPredicted RBP13.05□□□□□ -0.32
SPOP-202ENST00000393328 RESTQ13127 1097 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 RASGRF1Q13972 1273 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 STX1AQ16623 288 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 IMMTQ16891 758 aaKnown RBP13.05□□□□□ -0.32
SPOP-202ENST00000393328 SKIDA1Q1XH10 827 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 ERFEQ4G0M1 354 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 TOMM22Q9NS69 142 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 ABCF2Q9UG63 623 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 FHOD1Q9Y613 1164 aa13.05□□□□□ -0.32
SPOP-202ENST00000393328 ELP1O95163 1332 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 PRKAB2O43741 272 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 SLIT2O94813 1529 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 COL14A1Q05707 1796 aaKnown RBP13.04□□□□□ -0.32
SPOP-202ENST00000393328 ZNF213O14771 459 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 PRC1O43663 620 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 TOM1O60784 492 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 PNMA6AP0CW24 399 aaPredicted RBP13.04□□□□□ -0.32
SPOP-202ENST00000393328 PLA2G4AP47712 749 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 SYCP1Q15431 976 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 ARMCX5Q6P1M9 558 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 NBPF11Q86T75 865 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 ARMT1Q9H993 441 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 SENP2Q9HC62 589 aa13.04□□□□□ -0.32
SPOP-202ENST00000393328 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.04□□□□□ -0.32
SPOP-202ENST00000393328 PDE6AP16499 860 aa13.03□□□□□ -0.32
SPOP-202ENST00000393328 PDIA3P30101 505 aaKnown RBP13.03□□□□□ -0.32
SPOP-202ENST00000393328 GYG1P46976 350 aa13.03□□□□□ -0.32
SPOP-202ENST00000393328 EXOSC10Q01780 885 aaKnown RBP13.03□□□□□ -0.32
SPOP-202ENST00000393328 PUM3Q15397 648 aaKnown RBP13.03□□□□□ -0.32
SPOP-202ENST00000393328 ZRSR1Q15695 479 aaKnown RBP13.03□□□□□ -0.32
SPOP-202ENST00000393328 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
SPOP-202ENST00000393328 RALYLQ86SE5 291 aaKnown RBP13.03□□□□□ -0.32
SPOP-202ENST00000393328 MYL10Q9BUA6 226 aa13.03□□□□□ -0.32
SPOP-202ENST00000393328 CARD6Q9BX69 1037 aa13.03□□□□□ -0.32
SPOP-202ENST00000393328 MYH14Q7Z406 1995 aaKnown RBP13.03□□□□□ -0.32
SPOP-202ENST00000393328 DOT1LQ8TEK3 1739 aa13.03□□□□□ -0.32
SPOP-202ENST00000393328 KLF18A0A0U1RQI7 1052 aa13.03□□□□□ -0.32
SPOP-202ENST00000393328 SMIM22K7EJ46 135 aa13.03□□□□□ -0.32
SPOP-202ENST00000393328 ATP1A3P13637 1013 aa13.03□□□□□ -0.32
SPOP-202ENST00000393328 ADD2P35612 726 aa13.03□□□□□ -0.32
SPOP-202ENST00000393328 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
SPOP-202ENST00000393328 NSUN7Q8NE18 718 aaKnown RBP13.03□□□□□ -0.32
SPOP-202ENST00000393328 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.03□□□□□ -0.32
SPOP-202ENST00000393328 NUP98P52948 1817 aa13.03□□□□□ -0.32
SPOP-202ENST00000393328 IGHMBP2P38935 993 aaKnown RBP13.02□□□□□ -0.32
SPOP-202ENST00000393328 CTDSPL2Q05D32 466 aa13.02□□□□□ -0.32
SPOP-202ENST00000393328 BMS1Q14692 1282 aaKnown RBP13.02□□□□□ -0.32
SPOP-202ENST00000393328 SPATA5Q8NB90 893 aa13.02□□□□□ -0.32
SPOP-202ENST00000393328 AIDAQ96BJ3 306 aa13.02□□□□□ -0.32
SPOP-202ENST00000393328 B4E1Z4 1266 aa13.02□□□□□ -0.33
SPOP-202ENST00000393328 TRIM66O15016 1216 aa13.02□□□□□ -0.33
SPOP-202ENST00000393328 MBD4O95243 580 aa13.02□□□□□ -0.33
SPOP-202ENST00000393328 CHRNDQ07001 517 aa13.02□□□□□ -0.33
SPOP-202ENST00000393328 TBC1D10CQ8IV04 446 aa13.02□□□□□ -0.33
SPOP-202ENST00000393328 MNS1Q8NEH6 495 aa13.02□□□□□ -0.33
SPOP-202ENST00000393328 LPIN2Q92539 896 aa13.02□□□□□ -0.33
SPOP-202ENST00000393328 UBXN4Q92575 508 aa13.02□□□□□ -0.33
SPOP-202ENST00000393328 ZKSCAN3Q9BRR0 538 aa13.02□□□□□ -0.33
SPOP-202ENST00000393328 MYO5AQ9Y4I1 1855 aaKnown RBP13.02□□□□□ -0.33
SPOP-202ENST00000393328 GOLGA8BA8MQT2 603 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms