RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 APPBP2Q92624 585 aa22.24■■□□□ 1.15
CCDC50-202ENST00000392456 NSFL1CQ9UNZ2 370 aaKnown RBP22.24■■□□□ 1.15
CCDC50-202ENST00000392456 ZNF532Q9HCE3 1301 aa22.24■■□□□ 1.15
CCDC50-202ENST00000392456 TCRBV5S4A2TA0A5A2 114 aa22.23■■□□□ 1.15
CCDC50-202ENST00000392456 ZFYP08048 801 aaPredicted RBP22.23■■□□□ 1.15
CCDC50-202ENST00000392456 SRGNP10124 158 aa22.23■■□□□ 1.15
CCDC50-202ENST00000392456 CREBRFQ8IUR6 639 aa22.23■■□□□ 1.15
CCDC50-202ENST00000392456 LARP6Q9BRS8 491 aaKnown RBP22.23■■□□□ 1.15
CCDC50-202ENST00000392456 DHX16O60231 1041 aaKnown RBP22.23■■□□□ 1.15
CCDC50-202ENST00000392456 TICAM2Q86XR7 235 aa22.23■■□□□ 1.15
CCDC50-202ENST00000392456 JAG2Q9Y219 1238 aa22.23■■□□□ 1.15
CCDC50-202ENST00000392456 CASTP20810 708 aaKnown RBP22.22■■□□□ 1.15
CCDC50-202ENST00000392456 RAD51AP2Q09MP3 1159 aa22.22■■□□□ 1.15
CCDC50-202ENST00000392456 JAKMIP1Q96N16 626 aaKnown RBP22.22■■□□□ 1.15
CCDC50-202ENST00000392456 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.22■■□□□ 1.153e-7■■■□□ 17.2
CCDC50-202ENST00000392456 CYP21A2P08686 494 aa22.22■■□□□ 1.15
CCDC50-202ENST00000392456 MAGEB6Q8N7X4 407 aa22.22■■□□□ 1.15
CCDC50-202ENST00000392456 NRXN2Q9P2S2 1712 aa22.21■■□□□ 1.15
CCDC50-202ENST00000392456 HIBADHP31937 336 aaKnown RBP22.21■■□□□ 1.15
CCDC50-202ENST00000392456 TTLL5Q6EMB2 1281 aa22.21■■□□□ 1.15
CCDC50-202ENST00000392456 CRAMP1Q96RY5 1269 aa22.21■■□□□ 1.15
CCDC50-202ENST00000392456 ABCF2Q9UG63 623 aa22.21■■□□□ 1.15
CCDC50-202ENST00000392456 GPAA1O43292 621 aa22.21■■□□□ 1.15
CCDC50-202ENST00000392456 XDHP47989 1333 aa22.21■■□□□ 1.15
CCDC50-202ENST00000392456 BBOX1O75936 387 aa22.2■■□□□ 1.14
CCDC50-202ENST00000392456 NCBP1Q09161 790 aaKnown RBP22.2■■□□□ 1.14
CCDC50-202ENST00000392456 LRRFIP1Q32MZ4 808 aaKnown RBP22.2■■□□□ 1.14
CCDC50-202ENST00000392456 TTC14Q96N46 770 aa22.2■■□□□ 1.14
CCDC50-202ENST00000392456 ZKSCAN1P17029 563 aaPredicted RBP22.2■■□□□ 1.14
CCDC50-202ENST00000392456 UBE3CQ15386 1083 aa22.2■■□□□ 1.14
CCDC50-202ENST00000392456 SYCP1Q15431 976 aa22.2■■□□□ 1.14
CCDC50-202ENST00000392456 CTR9Q6PD62 1173 aa22.2■■□□□ 1.14
CCDC50-202ENST00000392456 CEP120Q8N960 986 aa22.2■■□□□ 1.14
CCDC50-202ENST00000392456 GNL3LQ9NVN8 582 aaKnown RBP22.2■■□□□ 1.14
CCDC50-202ENST00000392456 CEP83Q9Y592 693 aa22.2■■□□□ 1.14
CCDC50-202ENST00000392456 HNRNPH2P55795 449 aaKnown RBP22.19■■□□□ 1.14
CCDC50-202ENST00000392456 LRSAM1Q6UWE0 723 aa22.19■■□□□ 1.14
CCDC50-202ENST00000392456 ILDR1Q86SU0 546 aaPredicted RBP22.19■■□□□ 1.14
CCDC50-202ENST00000392456 TCEANC2Q96MN5 208 aa22.19■■□□□ 1.14
CCDC50-202ENST00000392456 DSCC1Q9BVC3 393 aa22.19■■□□□ 1.14
CCDC50-202ENST00000392456 LRP2BPQ9P2M1 347 aa22.19■■□□□ 1.14
CCDC50-202ENST00000392456 UTRNP46939 3433 aa22.19■■□□□ 1.14
CCDC50-202ENST00000392456 MYH7P12883 1935 aa22.19■■□□□ 1.14
CCDC50-202ENST00000392456 POLLQ9UGP5 575 aa22.19■■□□□ 1.14
CCDC50-202ENST00000392456 LEMD3Q9Y2U8 911 aa22.19■■□□□ 1.14
CCDC50-202ENST00000392456 U3KPZ7 1027 aaPredicted RBP22.19■■□□□ 1.14
CCDC50-202ENST00000392456 MAP3K12Q12852 859 aa22.18■■□□□ 1.14
CCDC50-202ENST00000392456 ADGRA1Q86SQ6 560 aa22.18■■□□□ 1.14
CCDC50-202ENST00000392456 KRT222Q8N1A0 295 aa22.18■■□□□ 1.14
CCDC50-202ENST00000392456 ZNF384Q8TF68 577 aa22.18■■□□□ 1.14
CCDC50-202ENST00000392456 ZSWIM6Q9HCJ5 1215 aa22.18■■□□□ 1.14
CCDC50-202ENST00000392456 ICE2Q659A1 982 aa22.18■■□□□ 1.14
CCDC50-202ENST00000392456 ZSCAN25Q6NSZ9 544 aa22.18■■□□□ 1.14
CCDC50-202ENST00000392456 TMX3Q96JJ7 454 aa22.18■■□□□ 1.14
CCDC50-202ENST00000392456 UFL1O94874 794 aa22.17■■□□□ 1.14
CCDC50-202ENST00000392456 CHAF1AQ13111 956 aaPredicted RBP22.17■■□□□ 1.14
CCDC50-202ENST00000392456 STOX1Q6ZVD7 989 aa22.17■■□□□ 1.14
CCDC50-202ENST00000392456 PPEF1O14829 653 aaPredicted RBP22.17■■□□□ 1.14
CCDC50-202ENST00000392456 PDE6BP35913 854 aa22.17■■□□□ 1.14
CCDC50-202ENST00000392456 AK2P54819 239 aa22.17■■□□□ 1.14
CCDC50-202ENST00000392456 C17orf53Q8N3J3 647 aaPredicted RBP22.17■■□□□ 1.14
CCDC50-202ENST00000392456 KIF18AQ8NI77 898 aa22.17■■□□□ 1.14
CCDC50-202ENST00000392456 LMBRD1Q9NUN5 540 aa22.17■■□□□ 1.14
CCDC50-202ENST00000392456 DENND2AQ9ULE3 1009 aa22.17■■□□□ 1.14
CCDC50-202ENST00000392456 SRCAPQ6ZRS2 3230 aa22.16■■□□□ 1.14
CCDC50-202ENST00000392456 FGAP02671 866 aa22.16■■□□□ 1.14
CCDC50-202ENST00000392456 NPR1P16066 1061 aa22.16■■□□□ 1.14
CCDC50-202ENST00000392456 RNF20Q5VTR2 975 aa22.16■■□□□ 1.14
CCDC50-202ENST00000392456 RPAP1Q9BWH6 1393 aaPredicted RBP22.16■■□□□ 1.14
CCDC50-202ENST00000392456 CHRNA5P30532 468 aa22.16■■□□□ 1.14
CCDC50-202ENST00000392456 TSGA10IPQ3SY00 556 aa22.16■■□□□ 1.14
CCDC50-202ENST00000392456 ZGPATQ8N5A5 531 aaKnown RBP22.16■■□□□ 1.14
CCDC50-202ENST00000392456 RASSF4Q9H2L5 321 aa22.16■■□□□ 1.14
CCDC50-202ENST00000392456 RUFY3Q7L099 469 aa22.15■■□□□ 1.14
CCDC50-202ENST00000392456 MIGA1Q8NAN2 632 aa22.15■■□□□ 1.14
CCDC50-202ENST00000392456 TBC1D16Q8TBP0 767 aa22.15■■□□□ 1.14
CCDC50-202ENST00000392456 TM6SF1Q9BZW5 370 aa22.15■■□□□ 1.14
CCDC50-202ENST00000392456 RAI14Q9P0K7 980 aa22.15■■□□□ 1.14
CCDC50-202ENST00000392456 STRBPQ96SI9 672 aaKnown RBP22.15■■□□□ 1.14
CCDC50-202ENST00000392456 BRMS1Q9HCU9 246 aa22.15■■□□□ 1.14
CCDC50-202ENST00000392456 GGA1Q9UJY5 639 aa22.15■■□□□ 1.14
CCDC50-202ENST00000392456 COL11A2P13942 1736 aaPredicted RBP22.14■■□□□ 1.14
CCDC50-202ENST00000392456 CCDC172P0C7W6 258 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 HAND2P61296 217 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 ARMT1Q9H993 441 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 CYP46A1Q9Y6A2 500 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 DOCK2Q92608 1830 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 MBD4O95243 580 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 CYP2C19P33261 490 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 C2CD5Q86YS7 1000 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 SP8Q8IXZ3 490 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 MASTLQ96GX5 879 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 PDRG1Q9NUG6 133 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 FAM53CQ9NYF3 392 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 ATP6V0A2Q9Y487 856 aa22.14■■□□□ 1.13
CCDC50-202ENST00000392456 GUCY2CP25092 1073 aa22.13■■□□□ 1.13
CCDC50-202ENST00000392456 PRDX5P30044 214 aa22.13■■□□□ 1.13
CCDC50-202ENST00000392456 FAM43BQ6ZT52 329 aaPredicted RBP22.13■■□□□ 1.13
CCDC50-202ENST00000392456 AIDAQ96BJ3 306 aa22.13■■□□□ 1.13
CCDC50-202ENST00000392456 PRKAB2O43741 272 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms