RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 BAG3O95817 575 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 TNNI2P48788 182 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 PDE1AP54750 535 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 LRRFIP1Q32MZ4 808 aaKnown RBP8.21□□□□□ -1.1
UBBP1-201ENST00000392399 ANGEL2Q5VTE6 544 aaKnown RBP8.21□□□□□ -1.1
UBBP1-201ENST00000392399 MAP1SQ66K74 1059 aaPredicted RBP8.21□□□□□ -1.1
UBBP1-201ENST00000392399 NAA16Q6N069 864 aaPredicted RBP8.21□□□□□ -1.1
UBBP1-201ENST00000392399 ZSCAN25Q6NSZ9 544 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 APOBEC3HQ6NTF7 200 aaKnown RBP8.21□□□□□ -1.1
UBBP1-201ENST00000392399 CENPQQ7L2Z9 268 aaPredicted RBP8.21□□□□□ -1.1
UBBP1-201ENST00000392399 KRT26Q7Z3Y9 468 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 DNAJC2Q99543 621 aaKnown RBP8.21□□□□□ -1.1
UBBP1-201ENST00000392399 NOL10Q9BSC4 688 aaKnown RBP8.21□□□□□ -1.1
UBBP1-201ENST00000392399 LNPKQ9C0E8 428 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.21□□□□□ -1.1
UBBP1-201ENST00000392399 OSBPL3Q9H4L5 887 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 PAG1Q9NWQ8 432 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 GGA3Q9NZ52 723 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 TMOD2Q9NZR1 351 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 PPP2R3BQ9Y5P8 575 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 ZNF646O15015 1829 aaPredicted RBP8.21□□□□□ -1.1
UBBP1-201ENST00000392399 GAKO14976 1311 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 AOX1Q06278 1338 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 SALL3Q9BXA9 1300 aa8.21□□□□□ -1.1
UBBP1-201ENST00000392399 GOLIM4O00461 696 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 IDH1O75874 414 aaKnown RBP8.2□□□□□ -1.1
UBBP1-201ENST00000392399 PLCG2P16885 1265 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 PPP4CP60510 307 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 DIXDC1Q155Q3 683 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 USP48Q86UV5 1035 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 FAM83AQ86UY5 434 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 PI4K2BQ8TCG2 481 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 CCDC136Q96JN2 1154 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 ANTXR1Q9H6X2 564 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 TDRD3Q9H7E2 651 aaKnown RBP8.2□□□□□ -1.1
UBBP1-201ENST00000392399 PIH1D3Q9NQM4 214 aaKnown RBP8.2□□□□□ -1.1
UBBP1-201ENST00000392399 ZNF70Q9UC06 446 aaPredicted RBP8.2□□□□□ -1.1
UBBP1-201ENST00000392399 DAGLAQ9Y4D2 1042 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 AKAP11Q9UKA4 1901 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 MYH13Q9UKX3 1938 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 MROH7-TTC4A0A0A0MT08 1334 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 PASKQ96RG2 1323 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 ADAMTSL1Q8N6G6 1762 aa8.2□□□□□ -1.1
UBBP1-201ENST00000392399 ZFYP08048 801 aaPredicted RBP8.19□□□□□ -1.1
UBBP1-201ENST00000392399 CYP7A1P22680 504 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 APLP1P51693 650 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 UBE3CQ15386 1083 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 SUPT20HL1Q3ZLR7 823 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 SLC9C2Q5TAH2 1124 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 CDC42EP5Q6NZY7 148 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 PLEKHM2Q8IWE5 1019 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 KBTBD3Q8NAB2 608 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 ZNF384Q8TF68 577 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 IDI2Q9BXS1 227 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 GLIS2Q9BZE0 524 aaPredicted RBP8.19□□□□□ -1.1
UBBP1-201ENST00000392399 DEFB129Q9H1M3 183 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 USP40Q9NVE5 1235 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 PPP4R2Q9NY27 417 aa8.19□□□□□ -1.1
UBBP1-201ENST00000392399 CLRN2A0PK11 232 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 ENTPD3O75355 529 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 HSPA6P17066 643 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 NF2P35240 595 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 BTDP43251 543 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 FKBP1BP68106 108 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 RASA3Q14644 834 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 MAGEB6Q8N7X4 407 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 OTUD7AQ8TE49 926 aaPredicted RBP8.18□□□□□ -1.1
UBBP1-201ENST00000392399 FAM151AQ8WW52 585 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 EVI5LQ96CN4 794 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 HOOK2Q96ED9 719 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 VEZTQ9HBM0 779 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 PCDHAC2Q9Y5I4 1007 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 NDUFB9Q9Y6M9 179 aa8.18□□□□□ -1.1
UBBP1-201ENST00000392399 ASTN2O75129 1339 aaPredicted RBP8.18□□□□□ -1.1
UBBP1-201ENST00000392399 UNCXA6NJT0 531 aa8.17□□□□□ -1.1
UBBP1-201ENST00000392399 TMEM88BA6NKF7 163 aa8.17□□□□□ -1.1
UBBP1-201ENST00000392399 PDE6AP16499 860 aa8.17□□□□□ -1.1
UBBP1-201ENST00000392399 ADD2P35612 726 aa8.17□□□□□ -1.1
UBBP1-201ENST00000392399 RHBDL3P58872 404 aa8.17□□□□□ -1.1
UBBP1-201ENST00000392399 TSHZ3Q63HK5 1081 aa8.17□□□□□ -1.1
UBBP1-201ENST00000392399 C2orf69Q8N8R5 385 aa8.17□□□□□ -1.1
UBBP1-201ENST00000392399 EDC3Q96F86 508 aaKnown RBP8.17□□□□□ -1.1
UBBP1-201ENST00000392399 CDCA5Q96FF9 252 aa8.17□□□□□ -1.1
UBBP1-201ENST00000392399 DCBLD2Q96PD2 775 aa8.17□□□□□ -1.1
UBBP1-201ENST00000392399 AATFQ9NY61 560 aaKnown RBP eCLIP8.17□□□□□ -1.1
UBBP1-201ENST00000392399 ZNF532Q9HCE3 1301 aa8.17□□□□□ -1.1
UBBP1-201ENST00000392399 MAGEB6P1A0A0J9YX57 407 aa8.16□□□□□ -1.1
UBBP1-201ENST00000392399 TCRBV5S4A2TA0A5A2 114 aa8.16□□□□□ -1.1
UBBP1-201ENST00000392399 TCP10L2B9ZVM9 353 aa8.16□□□□□ -1.1
UBBP1-201ENST00000392399 ADM5C9JUS6 153 aa8.16□□□□□ -1.1
UBBP1-201ENST00000392399 TRAF5O00463 557 aa8.16□□□□□ -1.1
UBBP1-201ENST00000392399 RNF113AO15541 343 aaKnown RBP8.16□□□□□ -1.1
UBBP1-201ENST00000392399 PPP1R12BO60237 982 aaPredicted RBP8.16□□□□□ -1.1
UBBP1-201ENST00000392399 CELF2O95319 508 aaKnown RBP8.16□□□□□ -1.1
UBBP1-201ENST00000392399 CST9Q5W186 159 aa8.16□□□□□ -1.1
UBBP1-201ENST00000392399 TEX11Q8IYF3 940 aa8.16□□□□□ -1.1
UBBP1-201ENST00000392399 HHIPL1Q96JK4 782 aa8.16□□□□□ -1.1
UBBP1-201ENST00000392399 FAM198AQ9UFP1 575 aa8.16□□□□□ -1.1
UBBP1-201ENST00000392399 POLR2AP24928 1970 aaKnown RBP8.15□□□□□ -1.1
UBBP1-201ENST00000392399 MYH2Q9UKX2 1941 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms