RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 MEGF6O75095 1541 aa20.77■□□□□ 0.92
ERCC2-201ENST00000391941 B4E1Z4 1266 aa20.77■□□□□ 0.92
ERCC2-201ENST00000391941 GNG11P61952 73 aa20.77■□□□□ 0.92
ERCC2-201ENST00000391941 BMS1Q14692 1282 aaKnown RBP20.77■□□□□ 0.92
ERCC2-201ENST00000391941 PLBD2Q8NHP8 589 aa20.77■□□□□ 0.92
ERCC2-201ENST00000391941 FAM89AQ96GI7 184 aa20.77■□□□□ 0.92
ERCC2-201ENST00000391941 PARP3Q9Y6F1 533 aa20.77■□□□□ 0.92
ERCC2-201ENST00000391941 VWA3AA6NCI4 1184 aa20.77■□□□□ 0.92
ERCC2-201ENST00000391941 TOP1P11387 765 aaKnown RBP20.77■□□□□ 0.92
ERCC2-201ENST00000391941 KRT40Q6A162 431 aa20.77■□□□□ 0.92
ERCC2-201ENST00000391941 BPIFA3Q9BQP9 254 aa20.77■□□□□ 0.92
ERCC2-201ENST00000391941 PSDA5PKW4 1024 aaPredicted RBP20.76■□□□□ 0.91
ERCC2-201ENST00000391941 GPAA1O43292 621 aa20.76■□□□□ 0.91
ERCC2-201ENST00000391941 YEATS4O95619 227 aa20.76■□□□□ 0.91
ERCC2-201ENST00000391941 PRR29P0C7W0 189 aa20.76■□□□□ 0.91
ERCC2-201ENST00000391941 CMA1P23946 247 aa20.76■□□□□ 0.91
ERCC2-201ENST00000391941 CASP1P29466 404 aa20.76■□□□□ 0.91
ERCC2-201ENST00000391941 HNRNPH2P55795 449 aaKnown RBP20.76■□□□□ 0.91
ERCC2-201ENST00000391941 FMR1Q06787 632 aaKnown RBP eCLIP20.76■□□□□ 0.913e-6■■□□□ 13.5
ERCC2-201ENST00000391941 H7C1W4 665 aa20.76■□□□□ 0.91
ERCC2-201ENST00000391941 GTF2E1P29083 439 aaPredicted RBP20.76■□□□□ 0.91
ERCC2-201ENST00000391941 CPLX3Q8WVH0 158 aa20.76■□□□□ 0.91
ERCC2-201ENST00000391941 CWC25Q9NXE8 425 aaPredicted RBP20.76■□□□□ 0.91
ERCC2-201ENST00000391941 RGPD5Q99666 1765 aa20.76■□□□□ 0.91
ERCC2-201ENST00000391941 ZNF213O14771 459 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 TPM4P67936 248 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 TMCO3Q6UWJ1 677 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 SEC31BQ9NQW1 1179 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 ADAMTS7Q9UKP4 1686 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 GUCY1A2P33402 732 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 IL15P40933 162 aaPredicted RBP20.75■□□□□ 0.91
ERCC2-201ENST00000391941 MYL5Q02045 173 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 ZKSCAN3Q9BRR0 538 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 KCNJ14Q9UNX9 436 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 SLIT3O75094 1523 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 SNAP23O00161 211 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 SLC39A14Q15043 492 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 IFNL2Q8IZJ0 200 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 CEP126Q9P2H0 1117 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 PPP2R2CQ9Y2T4 447 aa20.75■□□□□ 0.91
ERCC2-201ENST00000391941 TADA3O75528 432 aa20.74■□□□□ 0.91
ERCC2-201ENST00000391941 USP49Q70CQ1 688 aa20.74■□□□□ 0.91
ERCC2-201ENST00000391941 CNNM3Q8NE01 707 aa20.74■□□□□ 0.91
ERCC2-201ENST00000391941 AFDNP55196 1824 aaKnown RBP20.74■□□□□ 0.91
ERCC2-201ENST00000391941 METAP2P50579 478 aaKnown RBP eCLIP20.73■□□□□ 0.915e-7■■■■■ 29.1
ERCC2-201ENST00000391941 TMEM139Q8IV31 216 aa20.73■□□□□ 0.91
ERCC2-201ENST00000391941 NCOA7Q8NI08 942 aa20.73■□□□□ 0.91
ERCC2-201ENST00000391941 RANBP6O60518 1105 aaKnown RBP20.73■□□□□ 0.91
ERCC2-201ENST00000391941 IDH1O75874 414 aaKnown RBP20.73■□□□□ 0.91
ERCC2-201ENST00000391941 ZRANB2O95218 330 aaKnown RBP eCLIP20.73■□□□□ 0.914e-8■■■■□ 20.3
ERCC2-201ENST00000391941 SMARCE1Q969G3 411 aa20.73■□□□□ 0.91
ERCC2-201ENST00000391941 LZTFL1Q9NQ48 299 aa20.73■□□□□ 0.91
ERCC2-201ENST00000391941 SAMSN1Q9NSI8 373 aaKnown RBP20.73■□□□□ 0.91
ERCC2-201ENST00000391941 VSTM4Q8IW00 320 aa20.72■□□□□ 0.91
ERCC2-201ENST00000391941 GPR108Q9NPR9 543 aa20.72■□□□□ 0.91
ERCC2-201ENST00000391941 CAPN2P17655 700 aa20.72■□□□□ 0.91
ERCC2-201ENST00000391941 PTPAQ15257 358 aa20.72■□□□□ 0.91
ERCC2-201ENST00000391941 NFXL1Q6ZNB6 911 aa20.72■□□□□ 0.91
ERCC2-201ENST00000391941 BRAPQ7Z569 592 aa20.72■□□□□ 0.91
ERCC2-201ENST00000391941 CHMP4CQ96CF2 233 aa20.72■□□□□ 0.91
ERCC2-201ENST00000391941 CDK11BP21127 795 aaKnown RBP20.71■□□□□ 0.91
ERCC2-201ENST00000391941 STX17P56962 302 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 KLHL10Q6JEL2 608 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 ANKLE2Q86XL3 938 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 FBXL16Q8N461 479 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 DHX58Q96C10 678 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 SLC26A6Q9BXS9 759 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 PUF60Q9UHX1 559 aaKnown RBP20.71■□□□□ 0.91
ERCC2-201ENST00000391941 BTBD18B2RXH4 712 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 TAF7LQ5H9L4 462 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 CCDC158Q5M9N0 1113 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 WWC2Q6AWC2 1192 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 KCNH3Q9ULD8 1083 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 CAMTA1Q9Y6Y1 1673 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 NRDCO43847 1150 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 DHX16O60231 1041 aaKnown RBP20.71■□□□□ 0.91
ERCC2-201ENST00000391941 OAS2P29728 719 aaKnown RBP20.71■□□□□ 0.91
ERCC2-201ENST00000391941 CYP2C19P33261 490 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 SLC9C2Q5TAH2 1124 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 TIGD1Q96MW7 591 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 MED15Q96RN5 788 aa20.71■□□□□ 0.91
ERCC2-201ENST00000391941 MRPL44Q9H9J2 332 aaKnown RBP20.71■□□□□ 0.91
ERCC2-201ENST00000391941 hCG_1642624A0A1W2PR95 340 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 SOWAHDA6NJG2 315 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 TBC1D8O95759 1140 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 GPTP24298 496 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 CTDSPL2Q05D32 466 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 CCDC57Q2TAC2 916 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 RRP12Q5JTH9 1297 aaKnown RBP20.7■□□□□ 0.9
ERCC2-201ENST00000391941 HELBQ8NG08 1087 aaPredicted RBP20.7■□□□□ 0.9
ERCC2-201ENST00000391941 MAP3K14Q99558 947 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 BAG1Q99933 345 aaPredicted RBP20.7■□□□□ 0.9
ERCC2-201ENST00000391941 SUGCTQ9HAC7 445 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 NFE2L3Q9Y4A8 694 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 ABL1P00519 1130 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 MCAMP43121 646 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 SMYD4Q8IYR2 804 aaPredicted RBP20.7■□□□□ 0.9
ERCC2-201ENST00000391941 DCAF5Q96JK2 942 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 TUBE1Q9UJT0 475 aa20.7■□□□□ 0.9
ERCC2-201ENST00000391941 NWD2Q9ULI1 1742 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms