RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 IGSF22Q8N9C0 903 aa22.22■■□□□ 1.15
SHANK1-203ENST00000391813 DHX58Q96C10 678 aa22.22■■□□□ 1.15
SHANK1-203ENST00000391813 MYCBPQ99417 103 aaPredicted RBP22.22■■□□□ 1.15
SHANK1-203ENST00000391813 DDX21Q9NR30 783 aaKnown RBP eCLIP22.22■■□□□ 1.15
SHANK1-203ENST00000391813 ETF1P62495 437 aaKnown RBP22.22■■□□□ 1.15
SHANK1-203ENST00000391813 GPT2Q8TD30 523 aa22.22■■□□□ 1.15
SHANK1-203ENST00000391813 BICDL2A1A5D9 508 aa22.21■■□□□ 1.15
SHANK1-203ENST00000391813 FAM98CQ17RN3 349 aaKnown RBP22.21■■□□□ 1.15
SHANK1-203ENST00000391813 GOLGA5Q8TBA6 731 aa22.21■■□□□ 1.15
SHANK1-203ENST00000391813 TM6SF1Q9BZW5 370 aa22.21■■□□□ 1.15
SHANK1-203ENST00000391813 ERCC6LQ2NKX8 1250 aa22.21■■□□□ 1.15
SHANK1-203ENST00000391813 UBA5Q9GZZ9 404 aa22.21■■□□□ 1.15
SHANK1-203ENST00000391813 PTPRTO14522 1441 aa22.21■■□□□ 1.15
SHANK1-203ENST00000391813 CEP83Q9Y592 693 aa22.21■■□□□ 1.15
SHANK1-203ENST00000391813 METP08581 1390 aa22.2■■□□□ 1.15
SHANK1-203ENST00000391813 A0A1W2PRG0 241 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 GSTO1P78417 241 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 PARP10Q53GL7 1025 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 TMTC1Q8IUR5 882 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 MLKLQ8NB16 471 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 RPGRIP1Q96KN7 1286 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 CLASP1Q7Z460 1538 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 KAT6BQ8WYB5 2073 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 APOBRQ0VD83 1088 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 OTUD7AQ8TE49 926 aaPredicted RBP22.2■■□□□ 1.14
SHANK1-203ENST00000391813 IFT74Q96LB3 600 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 SNRKQ9NRH2 765 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 BAG6P46379 1132 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 MYOM2P54296 1465 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 SSH2Q76I76 1423 aa22.2■■□□□ 1.14
SHANK1-203ENST00000391813 IL15P40933 162 aaPredicted RBP22.19■■□□□ 1.14
SHANK1-203ENST00000391813 NLRP12P59046 1061 aa22.19■■□□□ 1.14
SHANK1-203ENST00000391813 GOLGA6BA6NDN3 693 aa22.19■■□□□ 1.14
SHANK1-203ENST00000391813 ZNF790Q6PG37 636 aa22.19■■□□□ 1.14
SHANK1-203ENST00000391813 CYP26C1Q6V0L0 522 aa22.19■■□□□ 1.14
SHANK1-203ENST00000391813 IFT81Q8WYA0 676 aa22.19■■□□□ 1.14
SHANK1-203ENST00000391813 SARNPP82979 210 aaKnown RBP22.19■■□□□ 1.14
SHANK1-203ENST00000391813 IQUBQ8NA54 791 aa22.19■■□□□ 1.14
SHANK1-203ENST00000391813 KIF24Q5T7B8 1368 aa22.18■■□□□ 1.14
SHANK1-203ENST00000391813 GNPATO15228 680 aa22.18■■□□□ 1.14
SHANK1-203ENST00000391813 NAA16Q6N069 864 aaPredicted RBP22.18■■□□□ 1.14
SHANK1-203ENST00000391813 MMRN2Q9H8L6 949 aa22.18■■□□□ 1.14
SHANK1-203ENST00000391813 MACROD2A1Z1Q3 448 aa22.18■■□□□ 1.14
SHANK1-203ENST00000391813 STX17P56962 302 aa22.18■■□□□ 1.14
SHANK1-203ENST00000391813 STXBP4Q6ZWJ1 553 aa22.18■■□□□ 1.14
SHANK1-203ENST00000391813 ZNF444Q8N0Y2 327 aaPredicted RBP22.18■■□□□ 1.14
SHANK1-203ENST00000391813 CEP63Q96MT8 703 aa22.18■■□□□ 1.14
SHANK1-203ENST00000391813 SWAP70Q9UH65 585 aa22.18■■□□□ 1.14
SHANK1-203ENST00000391813 TRPC5Q9UL62 973 aaPredicted RBP22.18■■□□□ 1.14
SHANK1-203ENST00000391813 CLNS1AP54105 237 aaKnown RBP22.18■■□□□ 1.14
SHANK1-203ENST00000391813 MAP3K9P80192 1104 aa22.18■■□□□ 1.14
SHANK1-203ENST00000391813 PHACTR3Q96KR7 559 aa22.18■■□□□ 1.14
SHANK1-203ENST00000391813 HDAC9Q9UKV0 1011 aa22.18■■□□□ 1.14
SHANK1-203ENST00000391813 CPA1P15085 419 aa22.17■■□□□ 1.14
SHANK1-203ENST00000391813 FAM173BQ6P4H8 233 aa22.17■■□□□ 1.14
SHANK1-203ENST00000391813 SELENOSQ9BQE4 189 aa22.17■■□□□ 1.14
SHANK1-203ENST00000391813 FAM135BQ49AJ0 1406 aa22.17■■□□□ 1.14
SHANK1-203ENST00000391813 ABCC3O15438 1527 aa22.17■■□□□ 1.14
SHANK1-203ENST00000391813 PPP1R2P41236 205 aa22.17■■□□□ 1.14
SHANK1-203ENST00000391813 ANO1Q5XXA6 986 aa22.17■■□□□ 1.14
SHANK1-203ENST00000391813 PSDA5PKW4 1024 aaPredicted RBP22.16■■□□□ 1.14
SHANK1-203ENST00000391813 LMBR1LQ6UX01 489 aa22.16■■□□□ 1.14
SHANK1-203ENST00000391813 SPATS2Q86XZ4 545 aaKnown RBP22.16■■□□□ 1.14
SHANK1-203ENST00000391813 SETDB1Q15047 1291 aa22.16■■□□□ 1.14
SHANK1-203ENST00000391813 KIAA1524Q8TCG1 905 aa22.16■■□□□ 1.14
SHANK1-203ENST00000391813 STIM2Q9P246 746 aa22.16■■□□□ 1.14
SHANK1-203ENST00000391813 MTRF1LQ9UGC7 380 aaKnown RBP22.16■■□□□ 1.14
SHANK1-203ENST00000391813 ERVV-2B6SEH9 535 aa22.16■■□□□ 1.14
SHANK1-203ENST00000391813 MPHOSPH10O00566 681 aaKnown RBP22.16■■□□□ 1.14
SHANK1-203ENST00000391813 ATP2B3Q16720 1220 aa22.16■■□□□ 1.14
SHANK1-203ENST00000391813 WWC2Q6AWC2 1192 aa22.16■■□□□ 1.14
SHANK1-203ENST00000391813 DDX17Q92841 729 aaKnown RBP22.16■■□□□ 1.14
SHANK1-203ENST00000391813 RUFY4Q6ZNE9 571 aa22.15■■□□□ 1.14
SHANK1-203ENST00000391813 LRRC8AQ8IWT6 810 aa22.15■■□□□ 1.14
SHANK1-203ENST00000391813 EYA3Q99504 573 aa22.15■■□□□ 1.14
SHANK1-203ENST00000391813 C8orf74Q6P047 294 aa22.15■■□□□ 1.14
SHANK1-203ENST00000391813 ESR2Q92731 530 aa22.15■■□□□ 1.14
SHANK1-203ENST00000391813 MED4Q9NPJ6 270 aa22.15■■□□□ 1.14
SHANK1-203ENST00000391813 HLA-DOAP06340 250 aa22.15■■□□□ 1.14
SHANK1-203ENST00000391813 RBM28Q9NW13 759 aaKnown RBP22.15■■□□□ 1.14
SHANK1-203ENST00000391813 RILPL1Q5EBL4 403 aa22.15■■□□□ 1.14
SHANK1-203ENST00000391813 SLC52A2Q9HAB3 445 aa22.15■■□□□ 1.14
SHANK1-203ENST00000391813 LRMPQ12912 555 aa22.14■■□□□ 1.14
SHANK1-203ENST00000391813 PPFIBP2Q8ND30 876 aa22.14■■□□□ 1.14
SHANK1-203ENST00000391813 SPATA31E1Q6ZUB1 1445 aa22.14■■□□□ 1.14
SHANK1-203ENST00000391813 ZNF772Q68DY9 489 aaPredicted RBP22.14■■□□□ 1.13
SHANK1-203ENST00000391813 PAG1Q9NWQ8 432 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 KDM5CP41229 1560 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 CLGNO14967 610 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 SLC27A2O14975 620 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 GIGYF1O75420 1035 aaPredicted RBP22.14■■□□□ 1.13
SHANK1-203ENST00000391813 FMNL3Q8IVF7 1028 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 IFT20Q8IY31 132 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 OGFOD1Q8N543 542 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 LRRC45Q96CN5 670 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 CABS1Q96KC9 395 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 ASIC1P78348 528 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 PDE4BQ07343 736 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 CROCCP2Q86T23 111 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 NEK11Q8NG66 645 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms