RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 GTF2A2P52657 109 aa17■□□□□ 0.31
PRPF18-202ENST00000378572 TAF1CQ15572 869 aaPredicted RBP17■□□□□ 0.31
PRPF18-202ENST00000378572 ATP2B3Q16720 1220 aa17■□□□□ 0.31
PRPF18-202ENST00000378572 TMEM57Q8N5G2 664 aa17■□□□□ 0.31
PRPF18-202ENST00000378572 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17■□□□□ 0.31
PRPF18-202ENST00000378572 WDR66Q8TBY9 1149 aa17■□□□□ 0.31
PRPF18-202ENST00000378572 RFX5P48382 616 aaPredicted RBP16.99■□□□□ 0.31
PRPF18-202ENST00000378572 INTS3Q68E01 1043 aaKnown RBP16.99■□□□□ 0.31
PRPF18-202ENST00000378572 PTPN18Q99952 460 aa16.99■□□□□ 0.31
PRPF18-202ENST00000378572 EFCC1Q9HA90 598 aa16.99■□□□□ 0.31
PRPF18-202ENST00000378572 GNL3LQ9NVN8 582 aaKnown RBP16.99■□□□□ 0.31
PRPF18-202ENST00000378572 CEP126Q9P2H0 1117 aa16.99■□□□□ 0.31
PRPF18-202ENST00000378572 SUGT1Q9Y2Z0 365 aa16.99■□□□□ 0.31
PRPF18-202ENST00000378572 SP3Q02447 781 aa16.99■□□□□ 0.31
PRPF18-202ENST00000378572 DCAF15Q66K64 600 aa16.99■□□□□ 0.31
PRPF18-202ENST00000378572 BRI3BPQ8WY22 251 aa16.99■□□□□ 0.31
PRPF18-202ENST00000378572 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
PRPF18-202ENST00000378572 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
PRPF18-202ENST00000378572 HDAC5Q9UQL6 1122 aa16.99■□□□□ 0.31
PRPF18-202ENST00000378572 LRRFIP2Q9Y608 721 aaKnown RBP16.99■□□□□ 0.31
PRPF18-202ENST00000378572 TESPA1A2RU30 521 aaPredicted RBP16.97■□□□□ 0.31
PRPF18-202ENST00000378572 TCP10Q12799 353 aa16.97■□□□□ 0.31
PRPF18-202ENST00000378572 APOBEC3HQ6NTF7 200 aaKnown RBP16.97■□□□□ 0.31
PRPF18-202ENST00000378572 HHIPL2Q6UWX4 724 aa16.97■□□□□ 0.31
PRPF18-202ENST00000378572 FAM83AQ86UY5 434 aa16.97■□□□□ 0.31
PRPF18-202ENST00000378572 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
PRPF18-202ENST00000378572 ZKSCAN4Q969J2 545 aaPredicted RBP16.97■□□□□ 0.31
PRPF18-202ENST00000378572 LDHBP07195 334 aaKnown RBP16.96■□□□□ 0.31
PRPF18-202ENST00000378572 DIXDC1Q155Q3 683 aa16.96■□□□□ 0.31
PRPF18-202ENST00000378572 MIGA2Q7L4E1 593 aa16.96■□□□□ 0.31
PRPF18-202ENST00000378572 ATG9AQ7Z3C6 839 aa16.96■□□□□ 0.31
PRPF18-202ENST00000378572 MS4A4AQ96JQ5 239 aa16.96■□□□□ 0.31
PRPF18-202ENST00000378572 ZNF341Q9BYN7 854 aa16.96■□□□□ 0.31
PRPF18-202ENST00000378572 PA2G4Q9UQ80 394 aaKnown RBP16.96■□□□□ 0.31
PRPF18-202ENST00000378572 SNCAIPQ9Y6H5 919 aa16.96■□□□□ 0.31
PRPF18-202ENST00000378572 SPDYE5A6NIY4 337 aa16.96■□□□□ 0.3
PRPF18-202ENST00000378572 CIAO1O76071 339 aa16.96■□□□□ 0.3
PRPF18-202ENST00000378572 SLC34A2O95436 690 aa16.96■□□□□ 0.3
PRPF18-202ENST00000378572 ARHGEF6Q15052 776 aa16.96■□□□□ 0.3
PRPF18-202ENST00000378572 ERO1BQ86YB8 467 aa16.96■□□□□ 0.3
PRPF18-202ENST00000378572 PTPN22Q9Y2R2 807 aa16.96■□□□□ 0.3
PRPF18-202ENST00000378572 DAGLAQ9Y4D2 1042 aa16.96■□□□□ 0.3
PRPF18-202ENST00000378572 AK9Q5TCS8 1911 aa16.95■□□□□ 0.3
PRPF18-202ENST00000378572 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
PRPF18-202ENST00000378572 CETPP11597 493 aa16.95■□□□□ 0.3
PRPF18-202ENST00000378572 PRDX5P30044 214 aa16.95■□□□□ 0.3
PRPF18-202ENST00000378572 IL15P40933 162 aaPredicted RBP16.95■□□□□ 0.3
PRPF18-202ENST00000378572 PRPF38BQ5VTL8 546 aaKnown RBP16.95■□□□□ 0.3
PRPF18-202ENST00000378572 FKBP1CQ5VVH2 108 aa16.95■□□□□ 0.3
PRPF18-202ENST00000378572 FAM43AQ8N2R8 423 aa16.95■□□□□ 0.3
PRPF18-202ENST00000378572 MRIQ9BWK5 157 aa16.95■□□□□ 0.3
PRPF18-202ENST00000378572 FBXO3Q9UK99 471 aa16.95■□□□□ 0.3
PRPF18-202ENST00000378572 SNAPC2Q13487 334 aa16.94■□□□□ 0.3
PRPF18-202ENST00000378572 MEIS3Q99687 375 aa16.94■□□□□ 0.3
PRPF18-202ENST00000378572 DENND2AQ9ULE3 1009 aa16.94■□□□□ 0.3
PRPF18-202ENST00000378572 ECM2O94769 699 aaPredicted RBP16.93■□□□□ 0.3
PRPF18-202ENST00000378572 PHKA1P46020 1223 aa16.93■□□□□ 0.3
PRPF18-202ENST00000378572 USP40Q9NVE5 1235 aa16.93■□□□□ 0.3
PRPF18-202ENST00000378572 ZBTB7BO15156 539 aaPredicted RBP16.93■□□□□ 0.3
PRPF18-202ENST00000378572 PPIL2Q13356 520 aa16.93■□□□□ 0.3
PRPF18-202ENST00000378572 KIF22Q14807 665 aa16.93■□□□□ 0.3
PRPF18-202ENST00000378572 CDC42EP5Q6NZY7 148 aa16.93■□□□□ 0.3
PRPF18-202ENST00000378572 DZIP1Q86YF9 867 aaKnown RBP16.93■□□□□ 0.3
PRPF18-202ENST00000378572 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
PRPF18-202ENST00000378572 ZBTB40Q9NUA8 1239 aa16.93■□□□□ 0.3
PRPF18-202ENST00000378572 IRF6O14896 467 aa16.92■□□□□ 0.3
PRPF18-202ENST00000378572 ADORA1P30542 326 aa16.92■□□□□ 0.3
PRPF18-202ENST00000378572 INPP5BP32019 993 aa16.92■□□□□ 0.3
PRPF18-202ENST00000378572 CCDC136Q96JN2 1154 aa16.92■□□□□ 0.3
PRPF18-202ENST00000378572 POTEFA5A3E0 1075 aa16.91■□□□□ 0.3
PRPF18-202ENST00000378572 SEMA3EO15041 775 aa16.91■□□□□ 0.3
PRPF18-202ENST00000378572 SRGAP3O43295 1099 aa16.91■□□□□ 0.3
PRPF18-202ENST00000378572 NFIAQ12857 509 aa16.91■□□□□ 0.3
PRPF18-202ENST00000378572 SLC9C1Q4G0N8 1177 aa16.91■□□□□ 0.3
PRPF18-202ENST00000378572 ZGPATQ8N5A5 531 aaKnown RBP16.91■□□□□ 0.3
PRPF18-202ENST00000378572 ABCF2Q9UG63 623 aa16.91■□□□□ 0.3
PRPF18-202ENST00000378572 BTBD19C9JJ37 291 aa16.9■□□□□ 0.3
PRPF18-202ENST00000378572 MYCP01106 439 aaPredicted RBP16.9■□□□□ 0.3
PRPF18-202ENST00000378572 GNAI3P08754 354 aa16.9■□□□□ 0.3
PRPF18-202ENST00000378572 CCDC102BQ68D86 513 aa16.9■□□□□ 0.3
PRPF18-202ENST00000378572 ZSCAN29Q8IWY8 852 aaPredicted RBP16.9■□□□□ 0.3
PRPF18-202ENST00000378572 TMEM106CQ9BVX2 250 aa16.9■□□□□ 0.3
PRPF18-202ENST00000378572 PPATQ06203 517 aa16.9■□□□□ 0.3
PRPF18-202ENST00000378572 COPRSQ9NQ92 184 aa16.9■□□□□ 0.3
PRPF18-202ENST00000378572 PTCH2Q9Y6C5 1203 aa16.9■□□□□ 0.3
PRPF18-202ENST00000378572 GORABQ5T7V8 394 aa16.89■□□□□ 0.29
PRPF18-202ENST00000378572 B4GALNT3Q6L9W6 998 aa16.89■□□□□ 0.29
PRPF18-202ENST00000378572 SALL1Q9NSC2 1324 aa16.88■□□□□ 0.29
PRPF18-202ENST00000378572 TLR2O60603 784 aa16.88■□□□□ 0.29
PRPF18-202ENST00000378572 TIMM10P62072 90 aa16.88■□□□□ 0.29
PRPF18-202ENST00000378572 CAP1Q01518 475 aa16.88■□□□□ 0.29
PRPF18-202ENST00000378572 SLC4A8Q2Y0W8 1093 aa16.88■□□□□ 0.29
PRPF18-202ENST00000378572 NBPF11Q86T75 865 aa16.88■□□□□ 0.29
PRPF18-202ENST00000378572 SLF2Q8IX21 1173 aa16.88■□□□□ 0.29
PRPF18-202ENST00000378572 ARMC5Q96C12 935 aa16.88■□□□□ 0.29
PRPF18-202ENST00000378572 NEUROD6Q96NK8 337 aa16.88■□□□□ 0.29
PRPF18-202ENST00000378572 ZCCHC17Q9NP64 241 aaKnown RBP16.88■□□□□ 0.29
PRPF18-202ENST00000378572 FAM198AQ9UFP1 575 aa16.88■□□□□ 0.29
PRPF18-202ENST00000378572 AKAP2Q9Y2D5 859 aa16.88■□□□□ 0.29
PRPF18-202ENST00000378572 DOCK2Q92608 1830 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms