RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 TRDNQ13061 729 aa23.58■■□□□ 1.37
CLN5-201ENST00000377453 CMTR1Q8N1G2 835 aaKnown RBP23.58■■□□□ 1.37
CLN5-201ENST00000377453 SYKP43405 635 aa23.58■■□□□ 1.36
CLN5-201ENST00000377453 NFXL1Q6ZNB6 911 aa23.58■■□□□ 1.36
CLN5-201ENST00000377453 PIGBQ92521 554 aa23.58■■□□□ 1.36
CLN5-201ENST00000377453 CPDO75976 1380 aa23.57■■□□□ 1.36
CLN5-201ENST00000377453 SH2B2O14492 632 aaPredicted RBP23.57■■□□□ 1.36
CLN5-201ENST00000377453 APOA5Q6Q788 366 aa23.57■■□□□ 1.36
CLN5-201ENST00000377453 SYT10Q6XYQ8 523 aa23.57■■□□□ 1.36
CLN5-201ENST00000377453 PPP1R13BQ96KQ4 1090 aa23.57■■□□□ 1.36
CLN5-201ENST00000377453 ZKSCAN3Q9BRR0 538 aa23.57■■□□□ 1.36
CLN5-201ENST00000377453 FANCCQ00597 558 aa23.57■■□□□ 1.36
CLN5-201ENST00000377453 SLC39A14Q15043 492 aa23.57■■□□□ 1.36
CLN5-201ENST00000377453 LRRFIP1Q32MZ4 808 aaKnown RBP23.57■■□□□ 1.36
CLN5-201ENST00000377453 KMT5BQ4FZB7 885 aa23.57■■□□□ 1.36
CLN5-201ENST00000377453 OSBPL5Q9H0X9 879 aaPredicted RBP23.57■■□□□ 1.36
CLN5-201ENST00000377453 ZMYM6O95789 1325 aa23.57■■□□□ 1.36
CLN5-201ENST00000377453 CMA1P23946 247 aa23.56■■□□□ 1.36
CLN5-201ENST00000377453 TMEM232C9JQI7 657 aa23.56■■□□□ 1.36
CLN5-201ENST00000377453 GUCY1A2P33402 732 aa23.56■■□□□ 1.36
CLN5-201ENST00000377453 GRIN1Q05586 938 aa23.56■■□□□ 1.36
CLN5-201ENST00000377453 PDE6AP16499 860 aa23.55■■□□□ 1.36
CLN5-201ENST00000377453 NLRP10Q86W26 655 aa23.55■■□□□ 1.36
CLN5-201ENST00000377453 SFPQP23246 707 aaKnown RBP eCLIP23.55■■□□□ 1.36
CLN5-201ENST00000377453 NKX1-1Q15270 411 aaPredicted RBP23.55■■□□□ 1.36
CLN5-201ENST00000377453 CCDC102BQ68D86 513 aa23.55■■□□□ 1.36
CLN5-201ENST00000377453 FAM217BQ9NTX9 383 aaPredicted RBP23.55■■□□□ 1.36
CLN5-201ENST00000377453 EVA1CP58658 441 aa23.54■■□□□ 1.36
CLN5-201ENST00000377453 PTPAQ15257 358 aa23.54■■□□□ 1.36
CLN5-201ENST00000377453 LONRF3Q496Y0 759 aa23.54■■□□□ 1.36
CLN5-201ENST00000377453 RRP12Q5JTH9 1297 aaKnown RBP23.54■■□□□ 1.36
CLN5-201ENST00000377453 FOXP4Q8IVH2 680 aaPredicted RBP23.54■■□□□ 1.36
CLN5-201ENST00000377453 SLC26A6Q9BXS9 759 aa23.54■■□□□ 1.36
CLN5-201ENST00000377453 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.54■■□□□ 1.36
CLN5-201ENST00000377453 MYO5AQ9Y4I1 1855 aaKnown RBP23.54■■□□□ 1.36
CLN5-201ENST00000377453 PRKAB2O43741 272 aa23.54■■□□□ 1.36
CLN5-201ENST00000377453 GSDMDP57764 484 aa23.54■■□□□ 1.36
CLN5-201ENST00000377453 FBXO38Q6PIJ6 1188 aa23.54■■□□□ 1.36
CLN5-201ENST00000377453 EPB41L4AQ9HCS5 686 aaPredicted RBP23.54■■□□□ 1.36
CLN5-201ENST00000377453 TBC1D2BQ9UPU7 963 aa23.54■■□□□ 1.36
CLN5-201ENST00000377453 GOLGA8AA7E2F4 631 aa23.53■■□□□ 1.36
CLN5-201ENST00000377453 IRS4O14654 1257 aaPredicted RBP23.53■■□□□ 1.36
CLN5-201ENST00000377453 COL5A2P05997 1499 aaPredicted RBP23.53■■□□□ 1.36
CLN5-201ENST00000377453 CTSWP56202 376 aa23.53■■□□□ 1.36
CLN5-201ENST00000377453 TMEM67Q5HYA8 995 aa23.53■■□□□ 1.36
CLN5-201ENST00000377453 UBR2Q8IWV8 1755 aa23.53■■□□□ 1.36
CLN5-201ENST00000377453 KIF18AQ8NI77 898 aa23.53■■□□□ 1.36
CLN5-201ENST00000377453 SLAIN2Q9P270 581 aa23.53■■□□□ 1.36
CLN5-201ENST00000377453 KCNJ14Q9UNX9 436 aa23.53■■□□□ 1.36
CLN5-201ENST00000377453 ATP2B1P20020 1258 aa23.53■■□□□ 1.36
CLN5-201ENST00000377453 PDE4BQ07343 736 aa23.53■■□□□ 1.36
CLN5-201ENST00000377453 METTL16Q86W50 562 aaKnown RBP23.53■■□□□ 1.36
CLN5-201ENST00000377453 SLC4A9Q96Q91 983 aa23.53■■□□□ 1.36
CLN5-201ENST00000377453 TRMT112Q9UI30 125 aaKnown RBP23.53■■□□□ 1.36
CLN5-201ENST00000377453 TNS2Q63HR2 1409 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 UBN2Q6ZU65 1347 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 VGLL2Q8N8G2 317 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 IGDCC4Q8TDY8 1250 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 MAP3K14Q99558 947 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 TMX1Q9H3N1 280 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 ARMT1Q9H993 441 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 LY9Q9HBG7 655 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 ANKRD18BA2A2Z9 1011 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 ZBTB43O43298 467 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 NTRK3Q16288 839 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 TOMM22Q9NS69 142 aa23.52■■□□□ 1.36
CLN5-201ENST00000377453 CGNQ9P2M7 1197 aaKnown RBP23.52■■□□□ 1.36
CLN5-201ENST00000377453 MAP3K15Q6ZN16 1313 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 SMIM22K7EJ46 135 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 ZNF827Q17R98 1081 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 GIGYF2Q6Y7W6 1299 aaKnown RBP23.51■■□□□ 1.35
CLN5-201ENST00000377453 GRAMD1CQ8IYS0 662 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 ZBTB1Q9Y2K1 713 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 C4AP0C0L4 1744 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 C4BP0C0L5 1744 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 SPEF2Q9C093 1822 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 KAT6BQ8WYB5 2073 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 SERPINC1P01008 464 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 IARSP41252 1262 aaKnown RBP23.51■■□□□ 1.35
CLN5-201ENST00000377453 AIDAQ96BJ3 306 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 BPIFA3Q9BQP9 254 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 ST7Q9NRC1 585 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 ZSWIM5Q9P217 1185 aa23.51■■□□□ 1.35
CLN5-201ENST00000377453 PARP4Q9UKK3 1724 aaKnown RBP23.5■■□□□ 1.35
CLN5-201ENST00000377453 MBD4O95243 580 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 BMP6P22004 513 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 SYCP1Q15431 976 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 ERCC6LQ2NKX8 1250 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 CFAP100Q494V2 611 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 MAGEB6Q8N7X4 407 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 CHMP4CQ96CF2 233 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 PLA2G12BQ9BX93 195 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 FANCLQ9NW38 375 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 HPSEQ9Y251 543 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 XIRP1Q702N8 1843 aaKnown RBP23.5■■□□□ 1.35
CLN5-201ENST00000377453 BTBD18B2RXH4 712 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 UBASH3AP57075 661 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 TRIM28Q13263 835 aaKnown RBP23.5■■□□□ 1.35
CLN5-201ENST00000377453 FAM177A1Q8N128 213 aaPredicted RBP23.5■■□□□ 1.35
CLN5-201ENST00000377453 STRBPQ96SI9 672 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms