RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 KCNG1Q9UIX4 513 aa23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 CDC23Q9UJX2 597 aa23.57■■□□□ 1.36
TMEFF1-201ENST00000374879 RNF40O75150 1001 aa23.56■■□□□ 1.36
TMEFF1-201ENST00000374879 MTF1Q14872 753 aa23.56■■□□□ 1.36
TMEFF1-201ENST00000374879 USPL1Q5W0Q7 1092 aa23.56■■□□□ 1.36
TMEFF1-201ENST00000374879 LRRC59Q96AG4 307 aaKnown RBP23.56■■□□□ 1.36
TMEFF1-201ENST00000374879 NCOA5Q9HCD5 579 aaKnown RBP23.56■■□□□ 1.36
TMEFF1-201ENST00000374879 LZTFL1Q9NQ48 299 aa23.56■■□□□ 1.36
TMEFF1-201ENST00000374879 MED1Q15648 1581 aaPredicted RBP23.56■■□□□ 1.36
TMEFF1-201ENST00000374879 BTBD11A6QL63 1104 aa23.56■■□□□ 1.36
TMEFF1-201ENST00000374879 HSP90AA4PQ58FG1 418 aa23.56■■□□□ 1.36
TMEFF1-201ENST00000374879 MED4Q9NPJ6 270 aa23.56■■□□□ 1.36
TMEFF1-201ENST00000374879 NFAT5O94916 1531 aa23.55■■□□□ 1.36
TMEFF1-201ENST00000374879 FBXW10Q5XX13 1052 aa23.55■■□□□ 1.36
TMEFF1-201ENST00000374879 ZNF530Q6P9A1 599 aaPredicted RBP23.55■■□□□ 1.36
TMEFF1-201ENST00000374879 MPRIPQ6WCQ1 1025 aa23.55■■□□□ 1.36
TMEFF1-201ENST00000374879 AFAP1L1Q8TED9 768 aa23.55■■□□□ 1.36
TMEFF1-201ENST00000374879 EAF2Q96CJ1 260 aaPredicted RBP23.55■■□□□ 1.36
TMEFF1-201ENST00000374879 TLR7Q9NYK1 1049 aaKnown RBP23.55■■□□□ 1.36
TMEFF1-201ENST00000374879 JCADQ9P266 1359 aa23.55■■□□□ 1.36
TMEFF1-201ENST00000374879 A0A0U1RQJ8 604 aa23.55■■□□□ 1.36
TMEFF1-201ENST00000374879 KCNV1Q6PIU1 500 aa23.55■■□□□ 1.36
TMEFF1-201ENST00000374879 ATRIPQ8WXE1 791 aa23.55■■□□□ 1.36
TMEFF1-201ENST00000374879 ESCO1Q5FWF5 840 aa23.54■■□□□ 1.36
TMEFF1-201ENST00000374879 COL15A1P39059 1388 aa23.54■■□□□ 1.36
TMEFF1-201ENST00000374879 SYF2O95926 243 aaKnown RBP23.53■■□□□ 1.36
TMEFF1-201ENST00000374879 AKAP4Q5JQC9 854 aa23.53■■□□□ 1.36
TMEFF1-201ENST00000374879 CCDC196A0A1B0GTZ2 297 aa23.53■■□□□ 1.36
TMEFF1-201ENST00000374879 POLR3DP05423 398 aaPredicted RBP23.53■■□□□ 1.36
TMEFF1-201ENST00000374879 CYP21A2P08686 494 aa23.53■■□□□ 1.36
TMEFF1-201ENST00000374879 OTUD7BQ6GQQ9 843 aa23.53■■□□□ 1.36
TMEFF1-201ENST00000374879 FAM212AQ96EL1 285 aa23.53■■□□□ 1.36
TMEFF1-201ENST00000374879 EDC3Q96F86 508 aaKnown RBP23.53■■□□□ 1.36
TMEFF1-201ENST00000374879 KDM3BQ7LBC6 1761 aa23.53■■□□□ 1.36
TMEFF1-201ENST00000374879 SPTLC2O15270 562 aa23.52■■□□□ 1.36
TMEFF1-201ENST00000374879 KIF1CO43896 1103 aaKnown RBP23.52■■□□□ 1.36
TMEFF1-201ENST00000374879 PFKFB1P16118 471 aa23.52■■□□□ 1.36
TMEFF1-201ENST00000374879 KCNH5Q8NCM2 988 aa23.52■■□□□ 1.36
TMEFF1-201ENST00000374879 KCNG4Q8TDN1 519 aa23.52■■□□□ 1.36
TMEFF1-201ENST00000374879 FAM107BQ9H098 131 aa23.52■■□□□ 1.36
TMEFF1-201ENST00000374879 PRPF6O94906 941 aaKnown RBP23.51■■□□□ 1.35
TMEFF1-201ENST00000374879 ACBD3Q9H3P7 528 aa23.51■■□□□ 1.35
TMEFF1-201ENST00000374879 SASH1O94885 1247 aa23.51■■□□□ 1.35
TMEFF1-201ENST00000374879 GBP3Q9H0R5 595 aa23.51■■□□□ 1.35
TMEFF1-201ENST00000374879 RGPD2P0DJD1 1756 aa23.51■■□□□ 1.35
TMEFF1-201ENST00000374879 SALL1Q9NSC2 1324 aa23.5■■□□□ 1.35
TMEFF1-201ENST00000374879 CCT5P48643 541 aa23.5■■□□□ 1.35
TMEFF1-201ENST00000374879 CCDC129Q6ZRS4 1044 aa23.5■■□□□ 1.35
TMEFF1-201ENST00000374879 TUBE1Q9UJT0 475 aa23.5■■□□□ 1.35
TMEFF1-201ENST00000374879 CCDC175P0C221 793 aa23.5■■□□□ 1.35
TMEFF1-201ENST00000374879 STOX1Q6ZVD7 989 aa23.5■■□□□ 1.35
TMEFF1-201ENST00000374879 CARD10Q9BWT7 1032 aa23.5■■□□□ 1.35
TMEFF1-201ENST00000374879 DBF4Q9UBU7 674 aaPredicted RBP23.5■■□□□ 1.35
TMEFF1-201ENST00000374879 FAM169AQ9Y6X4 670 aa23.5■■□□□ 1.35
TMEFF1-201ENST00000374879 SOWAHDA6NJG2 315 aa23.49■■□□□ 1.35
TMEFF1-201ENST00000374879 CHGBP05060 677 aa23.49■■□□□ 1.35
TMEFF1-201ENST00000374879 KIF4BQ2VIQ3 1234 aa23.49■■□□□ 1.35
TMEFF1-201ENST00000374879 ZNF569Q5MCW4 686 aa23.49■■□□□ 1.35
TMEFF1-201ENST00000374879 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.49■■□□□ 1.35
TMEFF1-201ENST00000374879 PNOCQ13519 176 aa23.48■■□□□ 1.35
TMEFF1-201ENST00000374879 SPECC1LQ69YQ0 1117 aa23.48■■□□□ 1.35
TMEFF1-201ENST00000374879 IGSF22Q8N9C0 903 aa23.48■■□□□ 1.35
TMEFF1-201ENST00000374879 C1orf141Q5JVX7 400 aa23.48■■□□□ 1.35
TMEFF1-201ENST00000374879 RIN2Q8WYP3 895 aaPredicted RBP23.48■■□□□ 1.35
TMEFF1-201ENST00000374879 MAP3K2Q9Y2U5 619 aa23.48■■□□□ 1.35
TMEFF1-201ENST00000374879 MROH7-TTC4A0A0A0MT08 1334 aa23.48■■□□□ 1.35
TMEFF1-201ENST00000374879 KIF5CO60282 957 aa23.47■■□□□ 1.35
TMEFF1-201ENST00000374879 YEATS4O95619 227 aa23.47■■□□□ 1.35
TMEFF1-201ENST00000374879 FDPSP14324 419 aaKnown RBP23.47■■□□□ 1.35
TMEFF1-201ENST00000374879 NOA1Q8NC60 698 aaKnown RBP23.47■■□□□ 1.35
TMEFF1-201ENST00000374879 POLR3EQ9NVU0 708 aa23.47■■□□□ 1.35
TMEFF1-201ENST00000374879 C9orf78Q9NZ63 289 aaPredicted RBP23.47■■□□□ 1.35
TMEFF1-201ENST00000374879 CARMIL3Q8ND23 1372 aa23.47■■□□□ 1.35
TMEFF1-201ENST00000374879 LMO7Q8WWI1 1683 aa23.47■■□□□ 1.35
TMEFF1-201ENST00000374879 RNMTO43148 476 aaKnown RBP23.47■■□□□ 1.35
TMEFF1-201ENST00000374879 CMA1P23946 247 aa23.47■■□□□ 1.35
TMEFF1-201ENST00000374879 ANKLE2Q86XL3 938 aa23.47■■□□□ 1.35
TMEFF1-201ENST00000374879 TDO2P48775 406 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 AARSP49588 968 aaKnown RBP eCLIP23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 AMOTQ4VCS5 1084 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 ADGRG1Q9Y653 693 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 CDHR2Q9BYE9 1310 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 CTAGE15A4D2H0 777 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 CTAGE8P0CG41 777 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 TUBB4BP68371 445 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 PROSER3Q2NL68 480 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 OLFM4Q6UX06 510 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 CTAGE6Q86UF2 777 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 CTAGE4Q8IX94 777 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 C19orf44Q9H6X5 657 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 USP8P40818 1118 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 PDE4BQ07343 736 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 RAD9BQ6WBX8 426 aa23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 DHX32Q7L7V1 743 aaKnown RBP23.46■■□□□ 1.35
TMEFF1-201ENST00000374879 PXDNQ92626 1479 aa23.45■■□□□ 1.35
TMEFF1-201ENST00000374879 EBAG9O00559 213 aa23.45■■□□□ 1.34
TMEFF1-201ENST00000374879 MARCKSP29966 332 aaPredicted RBP23.45■■□□□ 1.34
TMEFF1-201ENST00000374879 SMARCC1Q92922 1105 aaPredicted RBP23.45■■□□□ 1.34
TMEFF1-201ENST00000374879 U3KPZ7 1027 aaPredicted RBP23.45■■□□□ 1.34
TMEFF1-201ENST00000374879 CTAGE9A4FU28 777 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms