RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 IKBKBO14920 756 aa10.91□□□□□ -0.66
SF3A3-201ENST00000373019 NDUFA8P51970 172 aa10.91□□□□□ -0.66
SF3A3-201ENST00000373019 NBPF9Q3BBW0 867 aa10.91□□□□□ -0.66
SF3A3-201ENST00000373019 SDF4Q9BRK5 362 aa10.91□□□□□ -0.66
SF3A3-201ENST00000373019 SAMM50Q9Y512 469 aa10.91□□□□□ -0.66
SF3A3-201ENST00000373019 NLRP12P59046 1061 aa10.91□□□□□ -0.66
SF3A3-201ENST00000373019 MTF1Q14872 753 aa10.91□□□□□ -0.66
SF3A3-201ENST00000373019 SMARCC1Q92922 1105 aaPredicted RBP10.91□□□□□ -0.66
SF3A3-201ENST00000373019 FANCLQ9NW38 375 aa10.91□□□□□ -0.66
SF3A3-201ENST00000373019 DDX20Q9UHI6 824 aaKnown RBP10.91□□□□□ -0.66
SF3A3-201ENST00000373019 CCDC9Q9Y3X0 531 aaKnown RBP10.91□□□□□ -0.66
SF3A3-201ENST00000373019 ATXN2Q99700 1313 aaKnown RBP10.91□□□□□ -0.66
SF3A3-201ENST00000373019 TOP1P11387 765 aaKnown RBP10.9□□□□□ -0.66
SF3A3-201ENST00000373019 ZKSCAN1P17029 563 aaPredicted RBP10.9□□□□□ -0.66
SF3A3-201ENST00000373019 GGCXP38435 758 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 MAP4K1Q92918 833 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 ITFG2Q969R8 447 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 PCDHA7Q9UN72 937 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 SLC27A2O14975 620 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 EIF3HO15372 352 aaKnown RBP eCLIP10.9□□□□□ -0.66
SF3A3-201ENST00000373019 RASSF9O75901 435 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 RPS6KB1P23443 525 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 ADCY2Q08462 1091 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 TLDC1Q6P9B6 456 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 KIRREL3Q8IZU9 778 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 TERF2IPQ9NYB0 399 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 SKAP2O75563 359 aaPredicted RBP10.9□□□□□ -0.66
SF3A3-201ENST00000373019 ADKP55263 362 aaKnown RBP10.9□□□□□ -0.66
SF3A3-201ENST00000373019 MTX1Q13505 466 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 CFAP100Q494V2 611 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 GBP3Q9H0R5 595 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 KLC4Q9NSK0 619 aa10.9□□□□□ -0.66
SF3A3-201ENST00000373019 KIF20BQ96Q89 1820 aa10.9□□□□□ -0.67
SF3A3-201ENST00000373019 TMCO5BA8MYB1 307 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 WASLO00401 505 aaPredicted RBP10.89□□□□□ -0.67
SF3A3-201ENST00000373019 RDXP35241 583 aaKnown RBP10.89□□□□□ -0.67
SF3A3-201ENST00000373019 FAM228AQ86W67 206 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 RHPN1Q8TCX5 695 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 ORAI2Q96SN7 254 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 CDK19Q9BWU1 502 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 PTPRUQ92729 1446 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 H3BQV1 296 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 ME1P48163 572 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 ACTN3Q08043 901 aaPredicted RBP10.89□□□□□ -0.67
SF3A3-201ENST00000373019 ANKRD1Q15327 319 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 IFFO2Q5TF58 517 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 SSH3Q8TE77 659 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 LZTFL1Q9NQ48 299 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 SERPINC1P01008 464 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 TUBB4BP68371 445 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 MRPS27Q92552 414 aaKnown RBP10.89□□□□□ -0.67
SF3A3-201ENST00000373019 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.89□□□□□ -0.67
SF3A3-201ENST00000373019 ETAA1Q9NY74 926 aa10.89□□□□□ -0.67
SF3A3-201ENST00000373019 FRMD3A2A2Y4 597 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 MEFVO15553 781 aaPredicted RBP10.88□□□□□ -0.67
SF3A3-201ENST00000373019 PFKFB2O60825 505 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 SH3GL2Q99962 352 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 EMILIN1Q9Y6C2 1016 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 MYBL2P10244 700 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 HSPA1LP34931 641 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 ADALQ6DHV7 355 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 CCDC26Q8TAB7 109 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 FAM76AQ8TAV0 307 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 COG1Q8WTW3 980 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 CAPS2Q9BXY5 557 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 XRN1Q8IZH2 1706 aaKnown RBP10.88□□□□□ -0.67
SF3A3-201ENST00000373019 IBSPP21815 317 aaPredicted RBP10.88□□□□□ -0.67
SF3A3-201ENST00000373019 PSMA5P28066 241 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 PPFIA1Q13136 1202 aa10.88□□□□□ -0.67
SF3A3-201ENST00000373019 ABL1P00519 1130 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 SSR1P43307 286 aaKnown RBP10.87□□□□□ -0.67
SF3A3-201ENST00000373019 SMTNP53814 917 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 PHF8Q9UPP1 1060 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 CBFA2T2O43439 604 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 KIF4BQ2VIQ3 1234 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 HDGFL2Q7Z4V5 671 aaPredicted RBP10.87□□□□□ -0.67
SF3A3-201ENST00000373019 SMARCC2Q8TAQ2 1214 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 RUFY2Q8WXA3 655 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 SIL1Q9H173 461 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 USP42Q9H9J4 1324 aaKnown RBP10.87□□□□□ -0.67
SF3A3-201ENST00000373019 SHTN1A0MZ66 631 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 SOWAHDA6NJG2 315 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 TUBBP07437 444 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 MCM10Q7L590 875 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.87□□□□□ -0.67
SF3A3-201ENST00000373019 NUDT16Q96DE0 195 aaKnown RBP10.87□□□□□ -0.67
SF3A3-201ENST00000373019 GDAP1L1Q96MZ0 367 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 USP44Q9H0E7 712 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
SF3A3-201ENST00000373019 CTAGE15A4D2H0 777 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 GOLGA6CA6NDK9 693 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 SURF6O75683 361 aaKnown RBP10.86□□□□□ -0.67
SF3A3-201ENST00000373019 SLC3A2P08195 630 aaKnown RBP10.86□□□□□ -0.67
SF3A3-201ENST00000373019 GOLGA6DP0CG33 693 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 CTAGE8P0CG41 777 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 GNGT1P63211 74 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 STIM1Q13586 685 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 CTAGE6Q86UF2 777 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 CTAGE4Q8IX94 777 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms