RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ZNF296Q8WUU4 475 aaPredicted RBP23.3■■□□□ 1.32
TMEM53-201ENST00000372235 TESPA1A2RU30 521 aaPredicted RBP23.29■■□□□ 1.32
TMEM53-201ENST00000372235 FKTNO75072 461 aa23.29■■□□□ 1.32
TMEM53-201ENST00000372235 ADORA1P30542 326 aa23.29■■□□□ 1.32
TMEM53-201ENST00000372235 GTF2A2P52657 109 aa23.29■■□□□ 1.32
TMEM53-201ENST00000372235 CACNB3P54284 484 aa23.29■■□□□ 1.32
TMEM53-201ENST00000372235 ATP8B2P98198 1209 aa23.29■■□□□ 1.32
TMEM53-201ENST00000372235 RASGRF1Q13972 1273 aa23.29■■□□□ 1.32
TMEM53-201ENST00000372235 ITPRIPQ8IWB1 547 aa23.29■■□□□ 1.32
TMEM53-201ENST00000372235 ELP3Q9H9T3 547 aa23.29■■□□□ 1.32
TMEM53-201ENST00000372235 GPR108Q9NPR9 543 aa23.29■■□□□ 1.32
TMEM53-201ENST00000372235 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.29■■□□□ 1.32
TMEM53-201ENST00000372235 LAMB1P07942 1786 aa23.28■■□□□ 1.32
TMEM53-201ENST00000372235 PNMA6EA0A0J9YXQ4 647 aa23.28■■□□□ 1.32
TMEM53-201ENST00000372235 IGSF3O75054 1194 aa23.28■■□□□ 1.32
TMEM53-201ENST00000372235 UQCRFS1P1P0C7P4 283 aa23.28■■□□□ 1.32
TMEM53-201ENST00000372235 CDC42EP5Q6NZY7 148 aa23.28■■□□□ 1.32
TMEM53-201ENST00000372235 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.28■■□□□ 1.32
TMEM53-201ENST00000372235 FAM163AQ96GL9 167 aaPredicted RBP23.28■■□□□ 1.32
TMEM53-201ENST00000372235 ZNF341Q9BYN7 854 aa23.28■■□□□ 1.32
TMEM53-201ENST00000372235 USP40Q9NVE5 1235 aa23.28■■□□□ 1.32
TMEM53-201ENST00000372235 ABCF2Q9UG63 623 aa23.28■■□□□ 1.32
TMEM53-201ENST00000372235 MAP4K4O95819 1239 aaPredicted RBP23.27■■□□□ 1.32
TMEM53-201ENST00000372235 GSTO1P78417 241 aa23.27■■□□□ 1.32
TMEM53-201ENST00000372235 OS9Q13438 667 aaPredicted RBP23.27■■□□□ 1.32
TMEM53-201ENST00000372235 VGLL4Q14135 290 aa23.27■■□□□ 1.32
TMEM53-201ENST00000372235 POLA2Q14181 598 aa23.27■■□□□ 1.32
TMEM53-201ENST00000372235 DIXDC1Q155Q3 683 aa23.27■■□□□ 1.32
TMEM53-201ENST00000372235 ERICH6Q7L0X2 663 aa23.27■■□□□ 1.32
TMEM53-201ENST00000372235 SSH3Q8TE77 659 aa23.27■■□□□ 1.32
TMEM53-201ENST00000372235 WRNIP1Q96S55 665 aa23.27■■□□□ 1.32
TMEM53-201ENST00000372235 TNNQ9UQP3 1299 aa23.27■■□□□ 1.32
TMEM53-201ENST00000372235 LDHCP07864 332 aa23.26■■□□□ 1.31
TMEM53-201ENST00000372235 ERO1BQ86YB8 467 aa23.26■■□□□ 1.31
TMEM53-201ENST00000372235 SPDYE5A6NIY4 337 aa23.25■■□□□ 1.31
TMEM53-201ENST00000372235 ZBTB7BO15156 539 aaPredicted RBP23.25■■□□□ 1.31
TMEM53-201ENST00000372235 ENTPD3O75355 529 aa23.25■■□□□ 1.31
TMEM53-201ENST00000372235 IDI2Q9BXS1 227 aa23.25■■□□□ 1.31
TMEM53-201ENST00000372235 CHMP4BQ9H444 224 aaKnown RBP23.25■■□□□ 1.31
TMEM53-201ENST00000372235 GAKO14976 1311 aa23.25■■□□□ 1.31
TMEM53-201ENST00000372235 ARID4AP29374 1257 aaPredicted RBP23.24■■□□□ 1.31
TMEM53-201ENST00000372235 RGS19P49795 217 aa23.24■■□□□ 1.31
TMEM53-201ENST00000372235 CCDC158Q5M9N0 1113 aa23.24■■□□□ 1.31
TMEM53-201ENST00000372235 CDAN1Q8IWY9 1227 aa23.24■■□□□ 1.31
TMEM53-201ENST00000372235 SPATA5Q8NB90 893 aa23.24■■□□□ 1.31
TMEM53-201ENST00000372235 ZCCHC17Q9NP64 241 aaKnown RBP23.24■■□□□ 1.31
TMEM53-201ENST00000372235 IGF2BP3O00425 579 aaKnown RBP eCLIP23.23■■□□□ 1.31
TMEM53-201ENST00000372235 SURF6O75683 361 aaKnown RBP23.23■■□□□ 1.31
TMEM53-201ENST00000372235 CETPP11597 493 aa23.23■■□□□ 1.31
TMEM53-201ENST00000372235 GJA5P36382 358 aa23.23■■□□□ 1.31
TMEM53-201ENST00000372235 ARHGEF6Q15052 776 aa23.23■■□□□ 1.31
TMEM53-201ENST00000372235 ERO1AQ96HE7 468 aa23.23■■□□□ 1.31
TMEM53-201ENST00000372235 PPATQ06203 517 aa23.22■■□□□ 1.31
TMEM53-201ENST00000372235 TCP10Q12799 353 aa23.22■■□□□ 1.31
TMEM53-201ENST00000372235 SNAPC2Q13487 334 aa23.22■■□□□ 1.31
TMEM53-201ENST00000372235 OTUD5Q96G74 571 aa23.22■■□□□ 1.31
TMEM53-201ENST00000372235 MS4A4AQ96JQ5 239 aa23.22■■□□□ 1.31
TMEM53-201ENST00000372235 HMG20BQ9P0W2 317 aa23.22■■□□□ 1.31
TMEM53-201ENST00000372235 NOP58Q9Y2X3 529 aaKnown RBP23.22■■□□□ 1.31
TMEM53-201ENST00000372235 CCL15-CCL14A0A0B4J2E2 113 aa23.21■■□□□ 1.31
TMEM53-201ENST00000372235 PPIL2Q13356 520 aa23.21■■□□□ 1.31
TMEM53-201ENST00000372235 CCL15Q16663 113 aa23.21■■□□□ 1.31
TMEM53-201ENST00000372235 FBXO46Q6PJ61 603 aaPredicted RBP23.21■■□□□ 1.31
TMEM53-201ENST00000372235 ZFYVE28Q9HCC9 887 aa23.21■■□□□ 1.31
TMEM53-201ENST00000372235 SNCAIPQ9Y6H5 919 aa23.21■■□□□ 1.31
TMEM53-201ENST00000372235 MROH7-TTC4A0A0A0MT08 1334 aa23.21■■□□□ 1.31
TMEM53-201ENST00000372235 OTOFQ9HC10 1997 aa23.21■■□□□ 1.31
TMEM53-201ENST00000372235 NPM3O75607 178 aaKnown RBP23.2■■□□□ 1.3
TMEM53-201ENST00000372235 MLLT1Q03111 559 aaPredicted RBP23.2■■□□□ 1.3
TMEM53-201ENST00000372235 HSP90AB4PQ58FF6 505 aa23.2■■□□□ 1.3
TMEM53-201ENST00000372235 TNNI3KQ59H18 835 aa23.2■■□□□ 1.3
TMEM53-201ENST00000372235 TTC39AQ5SRH9 613 aa23.2■■□□□ 1.3
TMEM53-201ENST00000372235 ERC1Q8IUD2 1116 aa23.2■■□□□ 1.3
TMEM53-201ENST00000372235 NOL10Q9BSC4 688 aaKnown RBP23.2■■□□□ 1.3
TMEM53-201ENST00000372235 ZNF112Q9UJU3 913 aa23.2■■□□□ 1.3
TMEM53-201ENST00000372235 FPGT-TNNI3KV9GXZ4 949 aa23.2■■□□□ 1.3
TMEM53-201ENST00000372235 GPR75-ASB3A0A0A6YYF3 556 aa23.19■■□□□ 1.3
TMEM53-201ENST00000372235 BTDP43251 543 aa23.19■■□□□ 1.3
TMEM53-201ENST00000372235 MECOMQ03112 1051 aa23.19■■□□□ 1.3
TMEM53-201ENST00000372235 NFIAQ12857 509 aa23.19■■□□□ 1.3
TMEM53-201ENST00000372235 MIGA2Q7L4E1 593 aa23.19■■□□□ 1.3
TMEM53-201ENST00000372235 ZKSCAN4Q969J2 545 aaPredicted RBP23.19■■□□□ 1.3
TMEM53-201ENST00000372235 ZNF512BQ96KM6 892 aaPredicted RBP23.19■■□□□ 1.3
TMEM53-201ENST00000372235 LRP2BPQ9P2M1 347 aa23.19■■□□□ 1.3
TMEM53-201ENST00000372235 FAM198AQ9UFP1 575 aa23.19■■□□□ 1.3
TMEM53-201ENST00000372235 MYH2Q9UKX2 1941 aa23.18■■□□□ 1.3
TMEM53-201ENST00000372235 RLBP1P12271 317 aa23.18■■□□□ 1.3
TMEM53-201ENST00000372235 RGS3P49796 1198 aa23.18■■□□□ 1.3
TMEM53-201ENST00000372235 CRHR2Q13324 411 aa23.18■■□□□ 1.3
TMEM53-201ENST00000372235 NOL9Q5SY16 702 aaKnown RBP23.18■■□□□ 1.3
TMEM53-201ENST00000372235 ZSCAN29Q8IWY8 852 aaPredicted RBP23.18■■□□□ 1.3
TMEM53-201ENST00000372235 PTPN18Q99952 460 aa23.18■■□□□ 1.3
TMEM53-201ENST00000372235 RAI14Q9P0K7 980 aa23.18■■□□□ 1.3
TMEM53-201ENST00000372235 SP3Q02447 781 aa23.17■■□□□ 1.3
TMEM53-201ENST00000372235 TAF1CQ15572 869 aaPredicted RBP23.17■■□□□ 1.3
TMEM53-201ENST00000372235 BRI3BPQ8WY22 251 aa23.17■■□□□ 1.3
TMEM53-201ENST00000372235 NSUN4Q96CB9 384 aaKnown RBP23.17■■□□□ 1.3
TMEM53-201ENST00000372235 HPS5Q9UPZ3 1129 aa23.17■■□□□ 1.3
TMEM53-201ENST00000372235 BAG3O95817 575 aa23.16■■□□□ 1.3
TMEM53-201ENST00000372235 MCAMP43121 646 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms