RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 TBC1D5Q92609 795 aa13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 SPAG5Q96R06 1193 aa13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 IDEP14735 1019 aa13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 ASIC1P78348 528 aa13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 ZCRB1Q8TBF4 217 aaKnown RBP13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 TMOD2Q9NZR1 351 aa13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 ELF2Q15723 593 aa13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 A2ML1A8K2U0 1454 aa13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 TMEM2Q9UHN6 1383 aa13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 USP37Q86T82 979 aa13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 LIG1P18858 919 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 TTC14Q96N46 770 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 ATP8B1O43520 1251 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 TNNC1P63316 161 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 ZNF569Q5MCW4 686 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 CAMSAP1Q5T5Y3 1602 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 CPA1P15085 419 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 DNAI2Q9GZS0 605 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 ADGRL3Q9HAR2 1447 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 FAM227BQ96M60 508 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 RSPH14Q9UHP6 348 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 GSTTP1A0A1W2PQM5 241 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 LSG1Q9H089 658 aaKnown RBP13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 EFCAB8A8MWE9 144 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 NOP2P46087 812 aaKnown RBP13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 DHX58Q96C10 678 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 LZTFL1Q9NQ48 299 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 USP32Q8NFA0 1604 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 TBCAO75347 108 aaKnown RBP13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 TTC31Q49AM3 519 aaPredicted RBP13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
CDC42BPA-202ENST00000366764 CLUL1Q15846 466 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 NFATC2IPQ8NCF5 419 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 VPS18Q9P253 973 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 CYP7A1P22680 504 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 KIAA0753Q2KHM9 967 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 NAP1L3Q99457 506 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 VWA3BQ502W6 1294 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 CCDC122Q5T0U0 273 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 POTEDQ86YR6 584 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 NEK11Q8NG66 645 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 LMTK2Q8IWU2 1503 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 WDHD1O75717 1129 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 DTHD1Q6ZMT9 781 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 MED4Q9NPJ6 270 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 GUCA1BQ9UMX6 200 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 CDC42BPGQ6DT37 1551 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 POSTNQ15063 836 aa13.31□□□□□ -0.28
CDC42BPA-202ENST00000366764 ADCY9O60503 1353 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 GCP02774 474 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 GPTP24298 496 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 EIF4A1P60842 406 aaKnown RBP13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 PUM3Q15397 648 aaKnown RBP13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 AFAP1L1Q8TED9 768 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 NAP1L4Q99733 375 aaKnown RBP13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 C6orf50Q9HD87 102 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 PPLO60437 1756 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 HOOK3Q86VS8 718 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 GLT8D2Q9H1C3 349 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 CMA1P23946 247 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 ETF1P62495 437 aaKnown RBP13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 PKP1Q13835 747 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 PALD1Q9ULE6 856 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 A0A1B0GUL7 405 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 PPFIA1Q13136 1202 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 LRRC8AQ8IWT6 810 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 MAP4K1Q92918 833 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 LZTS2Q9BRK4 669 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 NFE2L3Q9Y4A8 694 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 CCDC129Q6ZRS4 1044 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 CCDC84Q86UT8 332 aaPredicted RBP13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 PPM1EQ8WY54 764 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 ABCA9Q8IUA7 1624 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 MYSM1Q5VVJ2 828 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 CROCCP2Q86T23 111 aa13.3□□□□□ -0.28
CDC42BPA-202ENST00000366764 EXOC5O00471 708 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 MEX3CQ5U5Q3 659 aaKnown RBP13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 CNNM4Q6P4Q7 775 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 MAGEB6P1A0A0J9YX57 407 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 HAUS7Q99871 368 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 BAZ2BQ9UIF8 2168 aaKnown RBP13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 HLA-DOAP06340 250 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.29□□□□□ -0.289e-7■■■■■ 149.5
CDC42BPA-202ENST00000366764 NCAPD2Q15021 1401 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 NR1I2O75469 434 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 GTF2A1P52655 376 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 CCDC121Q6ZUS5 278 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 CRACR2BQ8N4Y2 399 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 TMCO5BA8MYB1 307 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 TSPY3P0CV98 308 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 TSPY8P0CW00 308 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 DNAJC21Q5F1R6 531 aaKnown RBP13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 NUCKS1Q9H1E3 243 aaKnown RBP13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 GOPCQ9HD26 462 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 GPAA1O43292 621 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 WHAMMP3Q1A5X7 153 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 RAB11FIP4Q86YS3 637 aa13.29□□□□□ -0.28
CDC42BPA-202ENST00000366764 POLR3EQ9NVU0 708 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms