RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 FAM117BQ6P1L5 589 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 REXO1Q8N1G1 1221 aaKnown RBP5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 FBXO27Q8NI29 283 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 JARID2Q92833 1246 aaPredicted RBP5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 IRF7Q92985 503 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 BTBD6Q96KE9 485 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 ZNF408Q9H9D4 720 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 CBX8Q9HC52 389 aa5.72□□□□□ -1.49
RNU6-28P-201ENST00000362378 LINC01387J3KSC0 135 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 M0R082 166 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 OIP5O43482 229 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 CYP11A1P05108 521 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 RPL6Q02878 288 aaKnown RBP5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 GSTM4Q03013 218 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 PTPN11Q06124 597 aaPredicted RBP5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 CWF19L2Q2TBE0 894 aaKnown RBP5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 MSL1Q68DK7 614 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 CHSY3Q70JA7 882 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 REC114Q7Z4M0 266 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 WFDC8Q8IUA0 241 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 CKAP2LQ8IYA6 745 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 GALNT6Q8NCL4 622 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 ZNF417Q8TAU3 575 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 PMFBP1Q8TBY8 1022 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 SHDQ96IW2 340 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 ZNF587Q96SQ5 575 aaPredicted RBP5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 SRRTQ9BXP5 876 aaKnown RBP5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 KRT82Q9NSB4 513 aa5.71□□□□□ -1.5
RNU6-28P-201ENST00000362378 CADPSQ9ULU8 1353 aa5.7□□□□□ -1.5
RNU6-28P-201ENST00000362378 FSCN2O14926 492 aa5.7□□□□□ -1.5
RNU6-28P-201ENST00000362378 TLR3O15455 904 aaKnown RBP5.7□□□□□ -1.5
RNU6-28P-201ENST00000362378 ETFBP38117 255 aa5.7□□□□□ -1.5
RNU6-28P-201ENST00000362378 ZNF165P49910 485 aa5.7□□□□□ -1.5
RNU6-28P-201ENST00000362378 SERINC3Q13530 473 aa5.7□□□□□ -1.5
RNU6-28P-201ENST00000362378 COL9A3Q14050 684 aaPredicted RBP5.7□□□□□ -1.5
RNU6-28P-201ENST00000362378 MAP1SQ66K74 1059 aaPredicted RBP5.7□□□□□ -1.5
RNU6-28P-201ENST00000362378 MPRIPQ6WCQ1 1025 aa5.7□□□□□ -1.5
RNU6-28P-201ENST00000362378 SLC7A3Q8WY07 619 aa5.7□□□□□ -1.5
RNU6-28P-201ENST00000362378 OSBPL2Q9H1P3 480 aa5.7□□□□□ -1.5
RNU6-28P-201ENST00000362378 KLF4O43474 513 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 BPNT1O95861 308 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 BCRP11274 1271 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 SELPP16109 830 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 CDC25BP30305 580 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 GIPRP48546 466 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 SETDB1Q15047 1291 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 POU4F3Q15319 338 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 GIMAP6Q6P9H5 292 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 TXNDC11Q6PKC3 985 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 C8orf86Q6ZUL3 223 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 MAP4K3Q8IVH8 894 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 FAM177A1Q8N128 213 aaPredicted RBP5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 KLHL23Q8NBE8 558 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 CPLX3Q8WVH0 158 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 MKL1Q969V6 931 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 PSMG3-AS1Q96PY0 264 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 EHMT1Q9H9B1 1298 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 BRMS1Q9HCU9 246 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 PRKAG3Q9UGI9 489 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 PPT2Q9UMR5 302 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 MRVI1Q9Y6F6 885 aa5.69□□□□□ -1.5
RNU6-28P-201ENST00000362378 SHISA8B8ZZ34 492 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 GFRA2O00451 464 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 SMARCA5O60264 1052 aaPredicted RBP5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 ATE1O95260 518 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 IMPDH2P12268 514 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 NID1P14543 1247 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 MAOBP27338 520 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 CANXP27824 592 aaKnown RBP5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 MCM4P33991 863 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 ANKS3Q6ZW76 656 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 RBBP8NLQ8NC74 664 aaPredicted RBP5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 OR6P1Q8NGX9 317 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 GPBAR1Q8TDU6 330 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 KCNB2Q92953 911 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 KLHDC7BQ96G42 594 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 CORO1BQ9BR76 489 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 PIF1Q9H611 641 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 CCDC86Q9H6F5 360 aaKnown RBP5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 ZSWIM4Q9H7M6 989 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 ZNRF3Q9ULT6 936 aa5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 POLR3KQ9Y2Y1 108 aaPredicted RBP5.68□□□□□ -1.5
RNU6-28P-201ENST00000362378 ECEL1O95672 775 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 CELA2BP08218 269 aaPredicted RBP5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 EIF6P56537 245 aaKnown RBP5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 CLCQ05315 142 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 RAB33AQ14088 237 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 CCDC81Q6ZN84 652 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 DTWD1Q8N5C7 304 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 GALNT11Q8NCW6 608 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 ANAPC16Q96DE5 110 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 FERD3LQ96RJ6 166 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 CARD10Q9BWT7 1032 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 SIRPGQ9P1W8 387 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 TACC3Q9Y6A5 838 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 SNCAIPQ9Y6H5 919 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 PRR36Q9H6K5 1346 aa5.67□□□□□ -1.5
RNU6-28P-201ENST00000362378 ZNF862O60290 1169 aa5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 CTSBP07858 339 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms