RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 EPB41P11171 864 aaKnown RBP17.96■□□□□ 0.47
COL18A1-203ENST00000359759 BIRC3Q13489 604 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 NUF2Q9BZD4 464 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 FAM135AQ9P2D6 1515 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 CCDC141Q6ZP82 1450 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 KLHL7Q8IXQ5 586 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 MGARPQ8TDB4 240 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 RNF34Q969K3 372 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 UIMC1Q96RL1 719 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 MCM9Q9NXL9 1143 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 RBSNQ9H1K0 784 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 TNNQ9UQP3 1299 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 CHRNA2Q15822 529 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 COPS6Q7L5N1 327 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 SNX21Q969T3 373 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 DDX27Q96GQ7 796 aaKnown RBP17.96■□□□□ 0.47
COL18A1-203ENST00000359759 ERO1AQ96HE7 468 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 DDX21Q9NR30 783 aaKnown RBP eCLIP17.96■□□□□ 0.47
COL18A1-203ENST00000359759 STK38LQ9Y2H1 464 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 ASIC2Q16515 512 aa17.95■□□□□ 0.46
COL18A1-203ENST00000359759 BEND3Q5T5X7 828 aa17.95■□□□□ 0.46
COL18A1-203ENST00000359759 TUBB4BP68371 445 aa17.95■□□□□ 0.46
COL18A1-203ENST00000359759 RBM26Q5T8P6 1007 aaKnown RBP17.95■□□□□ 0.46
COL18A1-203ENST00000359759 HELBQ8NG08 1087 aaPredicted RBP17.95■□□□□ 0.46
COL18A1-203ENST00000359759 MYL5Q02045 173 aa17.95■□□□□ 0.46
COL18A1-203ENST00000359759 LETM2Q2VYF4 491 aa17.95■□□□□ 0.46
COL18A1-203ENST00000359759 PNMA8AQ86V59 439 aaPredicted RBP17.95■□□□□ 0.46
COL18A1-203ENST00000359759 SAP30BPQ9UHR5 308 aaKnown RBP17.95■□□□□ 0.46
COL18A1-203ENST00000359759 SV2BQ7L1I2 683 aa17.95■□□□□ 0.46
COL18A1-203ENST00000359759 CALML3P27482 149 aa17.95■□□□□ 0.46
COL18A1-203ENST00000359759 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.95■□□□□ 0.46
COL18A1-203ENST00000359759 USTQ9Y2C2 406 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 LRRC43Q8N309 656 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 ZRANB1Q9UGI0 708 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 ELP1O95163 1332 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 WASLO00401 505 aaPredicted RBP17.94■□□□□ 0.46
COL18A1-203ENST00000359759 BACH1O14867 736 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 RNF113AO15541 343 aaKnown RBP17.94■□□□□ 0.46
COL18A1-203ENST00000359759 PDE4DQ08499 809 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 CYP26C1Q6V0L0 522 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 MAEAQ7L5Y9 396 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 SMAP1Q8IYB5 467 aaPredicted RBP17.94■□□□□ 0.46
COL18A1-203ENST00000359759 WDR44Q5JSH3 913 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 TEX13AQ9BXU3 409 aaPredicted RBP17.94■□□□□ 0.46
COL18A1-203ENST00000359759 GRM8O00222 908 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 ZNF853P0CG23 659 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 CCDC62Q6P9F0 684 aa17.94■□□□□ 0.46
COL18A1-203ENST00000359759 TACO1Q9BSH4 297 aaKnown RBP17.94■□□□□ 0.46
COL18A1-203ENST00000359759 TFCP2Q12800 502 aa17.93■□□□□ 0.46
COL18A1-203ENST00000359759 ERCC6LQ2NKX8 1250 aa17.93■□□□□ 0.46
COL18A1-203ENST00000359759 VSIG1Q86XK7 387 aa17.93■□□□□ 0.46
COL18A1-203ENST00000359759 TBC1D8BQ0IIM8 1120 aa17.93■□□□□ 0.46
COL18A1-203ENST00000359759 RIMBP2O15034 1052 aa17.93■□□□□ 0.46
COL18A1-203ENST00000359759 KIFAP3Q92845 792 aa17.93■□□□□ 0.46
COL18A1-203ENST00000359759 FNBP1Q96RU3 617 aa17.93■□□□□ 0.46
COL18A1-203ENST00000359759 NCAPD3P42695 1498 aa17.93■□□□□ 0.46
COL18A1-203ENST00000359759 DAPK3O43293 454 aa17.93■□□□□ 0.46
COL18A1-203ENST00000359759 ATP8B2P98198 1209 aa17.93■□□□□ 0.46
COL18A1-203ENST00000359759 MRPL50Q8N5N7 158 aaKnown RBP17.93■□□□□ 0.46
COL18A1-203ENST00000359759 IQUBQ8NA54 791 aa17.93■□□□□ 0.46
COL18A1-203ENST00000359759 CCNT1O60563 726 aaKnown RBP17.92■□□□□ 0.46
COL18A1-203ENST00000359759 GABPAQ06546 454 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 KRT28Q7Z3Y7 464 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 DTNBO60941 627 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 HHATQ5VTY9 493 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 KSR1Q8IVT5 923 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 CCDC169A6NNP5 214 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 ATP6V1AP38606 617 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 CEBPAP49715 358 aaPredicted RBP17.92■□□□□ 0.46
COL18A1-203ENST00000359759 ZNF365Q70YC5 407 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 C8orf58Q8NAV2 365 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 SETDB2Q96T68 719 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 HDAC9Q9UKV0 1011 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 TTC21BQ7Z4L5 1316 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 OAS2P29728 719 aaKnown RBP17.92■□□□□ 0.46
COL18A1-203ENST00000359759 GDAP1L1Q96MZ0 367 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 AMOTL2Q9Y2J4 779 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 ADGRF5Q8IZF2 1346 aa17.92■□□□□ 0.46
COL18A1-203ENST00000359759 TSNAXIP1Q2TAA8 658 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 BRAPQ7Z569 592 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 ZNF804AQ7Z570 1209 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 IFT20Q8IY31 132 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 ANKRD44Q8N8A2 993 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 TRIM6Q9C030 488 aaPredicted RBP17.91■□□□□ 0.46
COL18A1-203ENST00000359759 STX10O60499 249 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 GPCPD1Q9NPB8 672 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 TBC1D7Q9P0N9 293 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 DISP3Q9P2K9 1392 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 ASIC3Q9UHC3 531 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 GOLGA6BA6NDN3 693 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 ACTN4O43707 911 aaKnown RBP17.91■□□□□ 0.46
COL18A1-203ENST00000359759 SH2D4BQ5SQS7 431 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 CSRNP2Q9H175 543 aa17.91■□□□□ 0.46
COL18A1-203ENST00000359759 GSDMBQ8TAX9 411 aa17.9■□□□□ 0.46
COL18A1-203ENST00000359759 SYNRGQ9UMZ2 1314 aa17.9■□□□□ 0.46
COL18A1-203ENST00000359759 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms